RNA–Protein interactions for RNA: ENST00000394609.6

RTN4-205, Transcript of reticulon 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-205ENST00000394609 CASP6P55212 293 aa5.89□□□□□ -1.47
RTN4-205ENST00000394609 RAB4BP61018 213 aa5.89□□□□□ -1.47
RTN4-205ENST00000394609 DAZAP2Q15038 168 aaPredicted RBP5.89□□□□□ -1.47
RTN4-205ENST00000394609 RHEBQ15382 184 aa5.89□□□□□ -1.47
RTN4-205ENST00000394609 MST1LQ2TV78 715 aa5.89□□□□□ -1.47
RTN4-205ENST00000394609 ZNF718Q3SXZ3 478 aa5.89□□□□□ -1.47
RTN4-205ENST00000394609 SCGB2B2Q4G0G5 96 aa5.89□□□□□ -1.47
RTN4-205ENST00000394609 UNQ6126/PRO20091Q6UXV3 157 aa5.89□□□□□ -1.47
RTN4-205ENST00000394609 WDR86Q86TI4 376 aa5.89□□□□□ -1.47
RTN4-205ENST00000394609 LRP11Q86VZ4 500 aa5.89□□□□□ -1.47
RTN4-205ENST00000394609 ZNF573Q86YE8 665 aa5.89□□□□□ -1.47
RTN4-205ENST00000394609 ZSCAN4Q8NAM6 433 aaPredicted RBP5.89□□□□□ -1.47
RTN4-205ENST00000394609 DYRK2Q92630 601 aa5.89□□□□□ -1.47
RTN4-205ENST00000394609 HIST1H2BAQ96A08 127 aa5.89□□□□□ -1.47
RTN4-205ENST00000394609 HDHD3Q9BSH5 251 aaPredicted RBP5.89□□□□□ -1.47
RTN4-205ENST00000394609 ADAT1Q9BUB4 502 aaKnown RBP5.89□□□□□ -1.47
RTN4-205ENST00000394609 BCL2L14Q9BZR8 327 aa5.89□□□□□ -1.47
RTN4-205ENST00000394609 OR51I2Q9H344 312 aa5.89□□□□□ -1.47
RTN4-205ENST00000394609 RHOFQ9HBH0 211 aa5.89□□□□□ -1.47
RTN4-205ENST00000394609 MSL2Q9HCI7 577 aa5.89□□□□□ -1.47
RTN4-205ENST00000394609 TREM1Q9NP99 234 aa5.89□□□□□ -1.47
RTN4-205ENST00000394609 PARP11Q9NR21 331 aa5.89□□□□□ -1.47
RTN4-205ENST00000394609 UFSP2Q9NUQ7 469 aa5.89□□□□□ -1.47
RTN4-205ENST00000394609 PPP1R14DQ9NXH3 145 aa5.89□□□□□ -1.47
RTN4-205ENST00000394609 IL36GQ9NZH8 169 aa5.89□□□□□ -1.47
RTN4-205ENST00000394609 MEMO1Q9Y316 297 aa5.89□□□□□ -1.47
RTN4-205ENST00000394609 NOP16Q9Y3C1 178 aaKnown RBP5.89□□□□□ -1.47
RTN4-205ENST00000394609 SMG1Q96Q15 3661 aaKnown RBP5.89□□□□□ -1.47
RTN4-205ENST00000394609 C9orf170A2RU37 121 aa5.88□□□□□ -1.47
RTN4-205ENST00000394609 FAM221AA4D161 298 aa5.88□□□□□ -1.47
RTN4-205ENST00000394609 RNASEK-C17orf49H0YIS7 233 aa5.88□□□□□ -1.47
RTN4-205ENST00000394609 TRAPPC2LH3BP13 241 aa5.88□□□□□ -1.47
RTN4-205ENST00000394609 CCL21O00585 134 aa5.88□□□□□ -1.47
RTN4-205ENST00000394609 IFNA10P01566 189 aa5.88□□□□□ -1.47
RTN4-205ENST00000394609 HLA-AP01891 365 aaKnown RBP5.88□□□□□ -1.47
RTN4-205ENST00000394609 GAPDHP04406 335 aaKnown RBP5.88□□□□□ -1.47
RTN4-205ENST00000394609 FCGR3AP08637 254 aa5.88□□□□□ -1.47
RTN4-205ENST00000394609 CA7P43166 264 aa5.88□□□□□ -1.47
RTN4-205ENST00000394609 ARHGDIBP52566 201 aa5.88□□□□□ -1.47
RTN4-205ENST00000394609 F2RL1P55085 397 aa5.88□□□□□ -1.47
RTN4-205ENST00000394609 RBM11P57052 281 aaKnown RBP5.88□□□□□ -1.47
RTN4-205ENST00000394609 RAB2AP61019 212 aa5.88□□□□□ -1.47
RTN4-205ENST00000394609 HOXA4Q00056 320 aaPredicted RBP5.88□□□□□ -1.47
RTN4-205ENST00000394609 OR8G1Q15617 311 aa5.88□□□□□ -1.47
RTN4-205ENST00000394609 MKXQ8IYA7 352 aa5.88□□□□□ -1.47
RTN4-205ENST00000394609 ST6GALNAC3Q8NDV1 305 aa5.88□□□□□ -1.47
RTN4-205ENST00000394609 OR8G5Q8NG78 346 aa5.88□□□□□ -1.47
RTN4-205ENST00000394609 OR4K15Q8NH41 348 aa5.88□□□□□ -1.47
RTN4-205ENST00000394609 SLC6A7Q99884 636 aa5.88□□□□□ -1.47
RTN4-205ENST00000394609 MICU1Q9BPX6 476 aa5.88□□□□□ -1.47
RTN4-205ENST00000394609 SULT4A1Q9BR01 284 aa5.88□□□□□ -1.47
RTN4-205ENST00000394609 RTL8AQ9BWD3 113 aa5.88□□□□□ -1.47
RTN4-205ENST00000394609 CHST6Q9GZX3 395 aa5.88□□□□□ -1.47
RTN4-205ENST00000394609 CHMP1AQ9HD42 196 aaPredicted RBP5.88□□□□□ -1.47
RTN4-205ENST00000394609 RAB18Q9NP72 206 aa5.88□□□□□ -1.47
RTN4-205ENST00000394609 CYTL1Q9NRR1 136 aa5.88□□□□□ -1.47
RTN4-205ENST00000394609 ZNF701Q9NV72 531 aaPredicted RBP5.88□□□□□ -1.47
RTN4-205ENST00000394609 ELOVL5Q9NYP7 299 aa5.88□□□□□ -1.47
RTN4-205ENST00000394609 JKAMPQ9P055 326 aa5.88□□□□□ -1.47
RTN4-205ENST00000394609 ROS1P08922 2347 aa5.88□□□□□ -1.47
RTN4-205ENST00000394609 SERPINE3A8MV23 424 aa5.88□□□□□ -1.47
RTN4-205ENST00000394609 FAM157AC9JC47 383 aa5.88□□□□□ -1.47
RTN4-205ENST00000394609 HSPB6O14558 160 aa5.88□□□□□ -1.47
RTN4-205ENST00000394609 CDIPTO14735 213 aa5.88□□□□□ -1.47
RTN4-205ENST00000394609 MLNRO43193 412 aa5.88□□□□□ -1.47
RTN4-205ENST00000394609 CD40P25942 277 aa5.88□□□□□ -1.47
RTN4-205ENST00000394609 CHATP28329 748 aa5.88□□□□□ -1.47
RTN4-205ENST00000394609 SULT1A2P50226 295 aa5.88□□□□□ -1.47
RTN4-205ENST00000394609 ZNF154Q13106 437 aa5.88□□□□□ -1.47
RTN4-205ENST00000394609 RNASE10Q5GAN6 216 aaKnown RBP5.88□□□□□ -1.47
RTN4-205ENST00000394609 MBNL2Q5VZF2 373 aaKnown RBP5.88□□□□□ -1.47
RTN4-205ENST00000394609 TMEM211Q6ICI0 200 aa5.88□□□□□ -1.47
RTN4-205ENST00000394609 PCSK4Q6UW60 755 aa5.88□□□□□ -1.47
RTN4-205ENST00000394609 Q6ZR03 302 aa5.88□□□□□ -1.47
RTN4-205ENST00000394609 BPIFB2Q8N4F0 458 aa5.88□□□□□ -1.47
RTN4-205ENST00000394609 SCCPDHQ8NBX0 429 aa5.88□□□□□ -1.47
RTN4-205ENST00000394609 GTF3AQ92664 365 aaKnown RBP5.88□□□□□ -1.47
RTN4-205ENST00000394609 SYT3Q9BQG1 590 aa5.88□□□□□ -1.47
RTN4-205ENST00000394609 AK3Q9UIJ7 227 aa5.88□□□□□ -1.47
RTN4-205ENST00000394609 IGKV1D-8A0A087WSZ0 117 aa5.87□□□□□ -1.47
RTN4-205ENST00000394609 A0A1B0GW64 132 aa5.87□□□□□ -1.47
RTN4-205ENST00000394609 FAM90A27PA6NNH2 459 aa5.87□□□□□ -1.47
RTN4-205ENST00000394609 ZNF705EA8MWA4 302 aaPredicted RBP5.87□□□□□ -1.47
RTN4-205ENST00000394609 PDCD6O75340 191 aa5.87□□□□□ -1.47
RTN4-205ENST00000394609 IFNA6P05013 189 aa5.87□□□□□ -1.47
RTN4-205ENST00000394609 THBDP07204 575 aa5.87□□□□□ -1.47
RTN4-205ENST00000394609 SFTA3P0C7M3 94 aa5.87□□□□□ -1.47
RTN4-205ENST00000394609 MUC1P15941 1255 aaPredicted RBP5.87□□□□□ -1.47
RTN4-205ENST00000394609 AMY2BP19961 511 aa5.87□□□□□ -1.47
RTN4-205ENST00000394609 RAB5AP20339 215 aa5.87□□□□□ -1.47
RTN4-205ENST00000394609 FUT3P21217 361 aa5.87□□□□□ -1.47
RTN4-205ENST00000394609 KITLGP21583 273 aa5.87□□□□□ -1.47
RTN4-205ENST00000394609 FGF12P61328 243 aa5.87□□□□□ -1.47
RTN4-205ENST00000394609 FABP9Q0Z7S8 132 aa5.87□□□□□ -1.47
RTN4-205ENST00000394609 IL24Q13007 206 aa5.87□□□□□ -1.47
RTN4-205ENST00000394609 ACTBL2Q562R1 376 aa5.87□□□□□ -1.47
RTN4-205ENST00000394609 PRSS54Q6PEW0 395 aa5.87□□□□□ -1.47
RTN4-205ENST00000394609 BTNL8Q6UX41 500 aa5.87□□□□□ -1.47
RTN4-205ENST00000394609 ZNF826PQ6ZT77 177 aa5.87□□□□□ -1.47
RTN4-205ENST00000394609 SLC16A13Q7RTY0 426 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms