RNA–Protein interactions for RNA: ENST00000394419.8

ACTN1-203, Transcript of actinin alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ACTN1, Length 3,464 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-203ENST00000394419 H3BQ15 152 aa9.03□□□□□ -0.96
ACTN1-203ENST00000394419 IGHV3-13P01766 116 aa9.03□□□□□ -0.96
ACTN1-203ENST00000394419 IGHV3-7P01780 117 aa9.03□□□□□ -0.96
ACTN1-203ENST00000394419 HOXC12P31275 282 aa9.03□□□□□ -0.96
ACTN1-203ENST00000394419 CEBPDP49716 269 aaPredicted RBP9.03□□□□□ -0.96
ACTN1-203ENST00000394419 RND3P61587 244 aa9.03□□□□□ -0.96
ACTN1-203ENST00000394419 ZNF816Q0VGE8 651 aaPredicted RBP9.03□□□□□ -0.96
ACTN1-203ENST00000394419 HABP2Q14520 560 aaPredicted RBP9.03□□□□□ -0.96
ACTN1-203ENST00000394419 FAM185AQ8N0U4 392 aa9.03□□□□□ -0.96
ACTN1-203ENST00000394419 HPSE2Q8WWQ2 592 aa9.03□□□□□ -0.96
ACTN1-203ENST00000394419 NINJ1Q92982 152 aa9.03□□□□□ -0.96
ACTN1-203ENST00000394419 TTTY12Q9BZ98 90 aa9.03□□□□□ -0.96
ACTN1-203ENST00000394419 FOXJ2Q9P0K8 574 aa9.03□□□□□ -0.96
ACTN1-203ENST00000394419 PGLYRP1O75594 196 aaPredicted RBP9.02□□□□□ -0.97
ACTN1-203ENST00000394419 S100A2P29034 98 aa9.02□□□□□ -0.97
ACTN1-203ENST00000394419 CEACAM6P40199 344 aa9.02□□□□□ -0.97
ACTN1-203ENST00000394419 OR8B8Q15620 311 aa9.02□□□□□ -0.97
ACTN1-203ENST00000394419 FOXL2NBQ6ZUU3 175 aa9.02□□□□□ -0.97
ACTN1-203ENST00000394419 TMEM171Q8WVE6 324 aa9.02□□□□□ -0.97
ACTN1-203ENST00000394419 RBMXL1Q96E39 390 aaKnown RBP9.02□□□□□ -0.97
ACTN1-203ENST00000394419 GINS3Q9BRX5 216 aa9.02□□□□□ -0.97
ACTN1-203ENST00000394419 PSENENQ9NZ42 101 aa9.02□□□□□ -0.97
ACTN1-203ENST00000394419 NTN3O00634 580 aaPredicted RBP9.02□□□□□ -0.97
ACTN1-203ENST00000394419 CYB5BO43169 146 aa9.02□□□□□ -0.97
ACTN1-203ENST00000394419 YIF1AO95070 293 aa9.02□□□□□ -0.97
ACTN1-203ENST00000394419 MDKP21741 143 aaPredicted RBP9.02□□□□□ -0.97
ACTN1-203ENST00000394419 MEOX1P50221 254 aa9.02□□□□□ -0.97
ACTN1-203ENST00000394419 NECAP1Q8NC96 275 aa9.02□□□□□ -0.97
ACTN1-203ENST00000394419 GNPNAT1Q96EK6 184 aaPredicted RBP9.02□□□□□ -0.97
ACTN1-203ENST00000394419 TAAR9Q96RI9 348 aa9.02□□□□□ -0.97
ACTN1-203ENST00000394419 REPIN1Q9BWE0 567 aaKnown RBP9.02□□□□□ -0.97
ACTN1-203ENST00000394419 C1QTNF5Q9BXJ0 243 aa9.02□□□□□ -0.97
ACTN1-203ENST00000394419 GLRX2Q9NS18 164 aa9.02□□□□□ -0.97
ACTN1-203ENST00000394419 KCNIP1Q9NZI2 227 aa9.02□□□□□ -0.97
ACTN1-203ENST00000394419 COLQQ9Y215 455 aaPredicted RBP9.02□□□□□ -0.97
ACTN1-203ENST00000394419 MED12LQ86YW9 2145 aa9.02□□□□□ -0.97
ACTN1-203ENST00000394419 ZNF503-AS2A6NEH8 195 aa9.01□□□□□ -0.97
ACTN1-203ENST00000394419 MMP7P09237 267 aaPredicted RBP9.01□□□□□ -0.97
ACTN1-203ENST00000394419 CTXN2P0C2S0 81 aa9.01□□□□□ -0.97
ACTN1-203ENST00000394419 ARR3P36575 388 aa9.01□□□□□ -0.97
ACTN1-203ENST00000394419 MPLP40238 635 aa9.01□□□□□ -0.97
ACTN1-203ENST00000394419 GABRA2P47869 451 aa9.01□□□□□ -0.97
ACTN1-203ENST00000394419 MRPL49Q13405 166 aaKnown RBP9.01□□□□□ -0.97
ACTN1-203ENST00000394419 COMMD1Q8N668 190 aa9.01□□□□□ -0.97
ACTN1-203ENST00000394419 TPRX1Q8N7U7 411 aa9.01□□□□□ -0.97
ACTN1-203ENST00000394419 TECTBQ96PL2 329 aa9.01□□□□□ -0.97
ACTN1-203ENST00000394419 ACACAQ13085 2346 aa9.01□□□□□ -0.97
ACTN1-203ENST00000394419 SMCO3A2RU48 225 aa9.01□□□□□ -0.97
ACTN1-203ENST00000394419 DEFB108AA8MXU0 73 aa9.01□□□□□ -0.97
ACTN1-203ENST00000394419 TNFSF15O95150 251 aa9.01□□□□□ -0.97
ACTN1-203ENST00000394419 IFNA4P05014 189 aa9.01□□□□□ -0.97
ACTN1-203ENST00000394419 BMP5P22003 454 aa9.01□□□□□ -0.97
ACTN1-203ENST00000394419 F2RP25116 425 aa9.01□□□□□ -0.97
ACTN1-203ENST00000394419 FABP6P51161 128 aa9.01□□□□□ -0.97
ACTN1-203ENST00000394419 DLK1P80370 383 aa9.01□□□□□ -0.97
ACTN1-203ENST00000394419 HOXA4Q00056 320 aaPredicted RBP9.01□□□□□ -0.97
ACTN1-203ENST00000394419 EDDM3AQ14507 147 aa9.01□□□□□ -0.97
ACTN1-203ENST00000394419 DCAF10Q5QP82 559 aa9.01□□□□□ -0.97
ACTN1-203ENST00000394419 C20orf204Q6ZNR8 217 aa9.01□□□□□ -0.97
ACTN1-203ENST00000394419 MDP1Q86V88 176 aa9.01□□□□□ -0.97
ACTN1-203ENST00000394419 GPR146Q96CH1 333 aa9.01□□□□□ -0.97
ACTN1-203ENST00000394419 RAB39BQ96DA2 213 aa9.01□□□□□ -0.97
ACTN1-203ENST00000394419 OR2J1Q9GZK6 312 aa9.01□□□□□ -0.97
ACTN1-203ENST00000394419 PRDM14Q9GZV8 571 aa9.01□□□□□ -0.97
ACTN1-203ENST00000394419 ATP23Q9Y6H3 246 aa9.01□□□□□ -0.97
ACTN1-203ENST00000394419 UBE2L5PA0A1B0GUS4 154 aa9.01□□□□□ -0.97
ACTN1-203ENST00000394419 ERVS71-1P61550 626 aa9.01□□□□□ -0.97
ACTN1-203ENST00000394419 PMP22Q01453 160 aa9.01□□□□□ -0.97
ACTN1-203ENST00000394419 EIF3IQ13347 325 aaKnown RBP9.01□□□□□ -0.97
ACTN1-203ENST00000394419 TMEM42Q69YG0 159 aa9.01□□□□□ -0.97
ACTN1-203ENST00000394419 ZNF787Q6DD87 383 aa9.01□□□□□ -0.97
ACTN1-203ENST00000394419 ABLIM2Q6H8Q1 611 aa9.01□□□□□ -0.97
ACTN1-203ENST00000394419 OR10V1Q8NGI7 309 aa9.01□□□□□ -0.97
ACTN1-203ENST00000394419 NANOS1Q8WY41 292 aaKnown RBP9.01□□□□□ -0.97
ACTN1-203ENST00000394419 OR2W1Q9Y3N9 320 aa9.01□□□□□ -0.97
ACTN1-203ENST00000394419 IGHV3-43A0A0B4J1X8 118 aa9□□□□□ -0.97
ACTN1-203ENST00000394419 TFF1P04155 84 aa9□□□□□ -0.97
ACTN1-203ENST00000394419 IGHV3-43DP0DP04 118 aa9□□□□□ -0.97
ACTN1-203ENST00000394419 RAC2P15153 192 aa9□□□□□ -0.97
ACTN1-203ENST00000394419 HERPUD1Q15011 391 aa9□□□□□ -0.97
ACTN1-203ENST00000394419 OR5A2Q8NGI9 324 aa9□□□□□ -0.97
ACTN1-203ENST00000394419 OR4D5Q8NGN0 318 aa9□□□□□ -0.97
ACTN1-203ENST00000394419 LYRM2Q9NU23 88 aaPredicted RBP9□□□□□ -0.97
ACTN1-203ENST00000394419 DLL3Q9NYJ7 618 aa9□□□□□ -0.97
ACTN1-203ENST00000394419 EXPH5Q8NEV8 1989 aa9□□□□□ -0.97
ACTN1-203ENST00000394419 KLRC4-KLRK1H3BQV0 150 aa9□□□□□ -0.97
ACTN1-203ENST00000394419 NEURL1O76050 574 aa9□□□□□ -0.97
ACTN1-203ENST00000394419 DFFBO76075 338 aa9□□□□□ -0.97
ACTN1-203ENST00000394419 TMEM50AO95807 157 aa9□□□□□ -0.97
ACTN1-203ENST00000394419 MT-CO3P00414 261 aa9□□□□□ -0.97
ACTN1-203ENST00000394419 ACAA1P09110 424 aaPredicted RBP9□□□□□ -0.97
ACTN1-203ENST00000394419 CD46P15529 392 aa9□□□□□ -0.97
ACTN1-203ENST00000394419 UCP3P55916 312 aa9□□□□□ -0.97
ACTN1-203ENST00000394419 ALKBH6Q3KRA9 238 aa9□□□□□ -0.97
ACTN1-203ENST00000394419 Q6ZPA2 131 aa9□□□□□ -0.97
ACTN1-203ENST00000394419 DEFB123Q8N688 67 aa9□□□□□ -0.97
ACTN1-203ENST00000394419 RPUSD4Q96CM3 377 aaKnown RBP9□□□□□ -0.97
ACTN1-203ENST00000394419 SDSLQ96GA7 329 aa9□□□□□ -0.97
ACTN1-203ENST00000394419 ADGRG7Q96K78 797 aa9□□□□□ -0.97
ACTN1-203ENST00000394419 ZNF665Q9H7R5 613 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms