RNA–Protein interactions for RNA: ENST00000393551.5

PDLIM7-205, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 1,226 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-205ENST00000393551 RTN4IP1Q8WWV3 396 aaPredicted RBP14.38□□□□□ -0.11
PDLIM7-205ENST00000393551 MRPS28Q9Y2Q9 187 aaKnown RBP14.38□□□□□ -0.11
PDLIM7-205ENST00000393551 WI2-2373I1.2A0A1W2PRP0 233 aa14.37□□□□□ -0.11
PDLIM7-205ENST00000393551 SERPINE3A8MV23 424 aa14.37□□□□□ -0.11
PDLIM7-205ENST00000393551 AIPO00170 330 aa14.37□□□□□ -0.11
PDLIM7-205ENST00000393551 HOXD3P31249 432 aaPredicted RBP14.37□□□□□ -0.11
PDLIM7-205ENST00000393551 VHLP40337 213 aa14.37□□□□□ -0.11
PDLIM7-205ENST00000393551 THBS3P49746 956 aa14.37□□□□□ -0.11
PDLIM7-205ENST00000393551 EGFEM1PQ0D2K5 195 aa14.37□□□□□ -0.11
PDLIM7-205ENST00000393551 SYT6Q5T7P8 510 aaPredicted RBP14.37□□□□□ -0.11
PDLIM7-205ENST00000393551 SIGIRRQ6IA17 410 aa14.37□□□□□ -0.11
PDLIM7-205ENST00000393551 C8orf86Q6ZUL3 223 aa14.37□□□□□ -0.11
PDLIM7-205ENST00000393551 C5orf24Q7Z6I8 188 aa14.37□□□□□ -0.11
PDLIM7-205ENST00000393551 STPG2Q8N412 459 aa14.37□□□□□ -0.11
PDLIM7-205ENST00000393551 DHRSXQ8N5I4 330 aa14.37□□□□□ -0.11
PDLIM7-205ENST00000393551 Q8N9W7 124 aa14.37□□□□□ -0.11
PDLIM7-205ENST00000393551 NEK7Q8TDX7 302 aa14.37□□□□□ -0.11
PDLIM7-205ENST00000393551 DERL3Q96Q80 235 aa14.37□□□□□ -0.11
PDLIM7-205ENST00000393551 BANF2Q9H503 90 aa14.37□□□□□ -0.11
PDLIM7-205ENST00000393551 H0YHG0 523 aa14.36□□□□□ -0.11
PDLIM7-205ENST00000393551 MAS1P04201 325 aa14.36□□□□□ -0.11
PDLIM7-205ENST00000393551 CT45A1Q5HYN5 189 aa14.36□□□□□ -0.11
PDLIM7-205ENST00000393551 RAB12Q6IQ22 244 aa14.36□□□□□ -0.11
PDLIM7-205ENST00000393551 SLC25A48Q6ZT89 311 aaKnown RBP14.36□□□□□ -0.11
PDLIM7-205ENST00000393551 SLC35E3Q7Z769 313 aa14.36□□□□□ -0.11
PDLIM7-205ENST00000393551 TGIF2LXQ8IUE1 241 aa14.36□□□□□ -0.11
PDLIM7-205ENST00000393551 JAGN1Q8N5M9 183 aa14.36□□□□□ -0.11
PDLIM7-205ENST00000393551 PACRGLQ8N7B6 248 aa14.36□□□□□ -0.11
PDLIM7-205ENST00000393551 SETD9Q8NE22 299 aa14.36□□□□□ -0.11
PDLIM7-205ENST00000393551 OR4K15Q8NH41 348 aa14.36□□□□□ -0.11
PDLIM7-205ENST00000393551 OR1L1Q8NH94 360 aa14.36□□□□□ -0.11
PDLIM7-205ENST00000393551 CT45A3Q8NHU0 189 aa14.36□□□□□ -0.11
PDLIM7-205ENST00000393551 FBLIM1Q8WUP2 373 aa14.36□□□□□ -0.11
PDLIM7-205ENST00000393551 CHCHD3Q9NX63 227 aaKnown RBP14.36□□□□□ -0.11
PDLIM7-205ENST00000393551 CKLFQ9UBR5 152 aa14.36□□□□□ -0.11
PDLIM7-205ENST00000393551 PSORS1C1Q9UIG5 152 aa14.36□□□□□ -0.11
PDLIM7-205ENST00000393551 KMT2CQ8NEZ4 4911 aaKnown RBP14.36□□□□□ -0.11
PDLIM7-205ENST00000393551 SC5DO75845 299 aa14.35□□□□□ -0.11
PDLIM7-205ENST00000393551 RCC1P18754 421 aaPredicted RBP14.35□□□□□ -0.11
PDLIM7-205ENST00000393551 ZNF137PP52743 207 aa14.35□□□□□ -0.11
PDLIM7-205ENST00000393551 GPR176Q14439 515 aa14.35□□□□□ -0.11
PDLIM7-205ENST00000393551 Q3ZCU0 254 aa14.35□□□□□ -0.11
PDLIM7-205ENST00000393551 AWAT2Q6E213 333 aa14.35□□□□□ -0.11
PDLIM7-205ENST00000393551 MRPS24Q96EL2 167 aaKnown RBP14.35□□□□□ -0.11
PDLIM7-205ENST00000393551 P2RX4Q99571 388 aa14.35□□□□□ -0.11
PDLIM7-205ENST00000393551 ABCG5Q9H222 651 aa14.35□□□□□ -0.11
PDLIM7-205ENST00000393551 ETAA1Q9NY74 926 aa14.35□□□□□ -0.11
PDLIM7-205ENST00000393551 NBEAL2Q6ZNJ1 2754 aa14.34□□□□□ -0.11
PDLIM7-205ENST00000393551 EFCAB10A6NFE3 127 aa14.34□□□□□ -0.11
PDLIM7-205ENST00000393551 NCBP2LA6PVI3 153 aaKnown RBP14.34□□□□□ -0.11
PDLIM7-205ENST00000393551 MCRIP1C9JLW8 97 aa14.34□□□□□ -0.11
PDLIM7-205ENST00000393551 ANKRD65E5RJM6 399 aa14.34□□□□□ -0.11
PDLIM7-205ENST00000393551 DUS4LO95620 317 aaKnown RBP14.34□□□□□ -0.11
PDLIM7-205ENST00000393551 HBZP02008 142 aa14.34□□□□□ -0.11
PDLIM7-205ENST00000393551 MGMTP16455 207 aa14.34□□□□□ -0.11
PDLIM7-205ENST00000393551 CELP19835 753 aa14.34□□□□□ -0.11
PDLIM7-205ENST00000393551 CD1BP29016 333 aa14.34□□□□□ -0.11
PDLIM7-205ENST00000393551 GPR12P47775 334 aa14.34□□□□□ -0.11
PDLIM7-205ENST00000393551 F2RL1P55085 397 aa14.34□□□□□ -0.11
PDLIM7-205ENST00000393551 GP2P55259 537 aaKnown RBP14.34□□□□□ -0.11
PDLIM7-205ENST00000393551 INSL4Q14641 139 aa14.34□□□□□ -0.11
PDLIM7-205ENST00000393551 LCNL1Q6ZST4 164 aa14.34□□□□□ -0.11
PDLIM7-205ENST00000393551 CDH26Q8IXH8 852 aa14.34□□□□□ -0.11
PDLIM7-205ENST00000393551 OR10V1Q8NGI7 309 aa14.34□□□□□ -0.11
PDLIM7-205ENST00000393551 OR2T10Q8NGZ9 312 aa14.34□□□□□ -0.11
PDLIM7-205ENST00000393551 Q96M66 194 aa14.34□□□□□ -0.11
PDLIM7-205ENST00000393551 SELENOIQ9C0D9 397 aa14.34□□□□□ -0.11
PDLIM7-205ENST00000393551 SPACA1Q9HBV2 294 aa14.34□□□□□ -0.11
PDLIM7-205ENST00000393551 ZFP57Q9NU63 452 aa14.34□□□□□ -0.11
PDLIM7-205ENST00000393551 LIN7CQ9NUP9 197 aaKnown RBP14.34□□□□□ -0.11
PDLIM7-205ENST00000393551 FKBP14Q9NWM8 211 aa14.34□□□□□ -0.11
PDLIM7-205ENST00000393551 CNOT2Q9NZN8 540 aaKnown RBP14.34□□□□□ -0.11
PDLIM7-205ENST00000393551 TRAPPC2LQ9UL33 140 aa14.34□□□□□ -0.11
PDLIM7-205ENST00000393551 PEX16Q9Y5Y5 336 aa14.34□□□□□ -0.11
PDLIM7-205ENST00000393551 CD1AP06126 327 aa14.33□□□□□ -0.12
PDLIM7-205ENST00000393551 CAPGP40121 348 aa14.33□□□□□ -0.12
PDLIM7-205ENST00000393551 TAS2R43P59537 309 aa14.33□□□□□ -0.12
PDLIM7-205ENST00000393551 MED21Q13503 144 aa14.33□□□□□ -0.12
PDLIM7-205ENST00000393551 RCN1Q15293 331 aa14.33□□□□□ -0.12
PDLIM7-205ENST00000393551 AHSA2Q719I0 299 aa14.33□□□□□ -0.12
PDLIM7-205ENST00000393551 FOXRED2Q8IWF2 684 aa14.33□□□□□ -0.12
PDLIM7-205ENST00000393551 PRR18Q8N4B5 295 aa14.33□□□□□ -0.12
PDLIM7-205ENST00000393551 STX19Q8N4C7 294 aa14.33□□□□□ -0.12
PDLIM7-205ENST00000393551 FAM71E2Q8N5Q1 922 aa14.33□□□□□ -0.12
PDLIM7-205ENST00000393551 NANOGP1Q8N7R0 232 aa14.33□□□□□ -0.12
PDLIM7-205ENST00000393551 KLHL30-AS1Q8NEE0 82 aa14.33□□□□□ -0.12
PDLIM7-205ENST00000393551 OR51D1Q8NGF3 324 aa14.33□□□□□ -0.12
PDLIM7-205ENST00000393551 DUX3Q96PT4 197 aa14.33□□□□□ -0.12
PDLIM7-205ENST00000393551 S1PR3Q99500 378 aa14.33□□□□□ -0.12
PDLIM7-205ENST00000393551 HSPB9Q9BQS6 159 aa14.33□□□□□ -0.12
PDLIM7-205ENST00000393551 C8orf4Q9NR00 106 aa14.33□□□□□ -0.12
PDLIM7-205ENST00000393551 PLCXD1Q9NUJ7 323 aa14.33□□□□□ -0.12
PDLIM7-205ENST00000393551 UBE2QL1A1L167 161 aa14.32□□□□□ -0.12
PDLIM7-205ENST00000393551 FAM90A10PA6NDY2 464 aa14.32□□□□□ -0.12
PDLIM7-205ENST00000393551 FAM90A7PA6NKC0 464 aa14.32□□□□□ -0.12
PDLIM7-205ENST00000393551 FAM90A23PA8MXZ1 464 aa14.32□□□□□ -0.12
PDLIM7-205ENST00000393551 AP4M1O00189 453 aa14.32□□□□□ -0.12
PDLIM7-205ENST00000393551 SPINT2O43291 252 aa14.32□□□□□ -0.12
PDLIM7-205ENST00000393551 CRTAPO75718 401 aaPredicted RBP14.32□□□□□ -0.12
PDLIM7-205ENST00000393551 MOSP00540 346 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms