RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 J3QR06 171 aa6.16□□□□□ -1.42
HMGB3P1-201ENST00000393368 MRPS14O60783 128 aaKnown RBP6.16□□□□□ -1.42
HMGB3P1-201ENST00000393368 HBZP02008 142 aa6.16□□□□□ -1.42
HMGB3P1-201ENST00000393368 SLC2A2P11168 524 aaPredicted RBP6.16□□□□□ -1.42
HMGB3P1-201ENST00000393368 MYL9P24844 172 aa6.16□□□□□ -1.42
HMGB3P1-201ENST00000393368 BLVRBP30043 206 aaPredicted RBP6.16□□□□□ -1.42
HMGB3P1-201ENST00000393368 REG1BP48304 166 aa6.16□□□□□ -1.42
HMGB3P1-201ENST00000393368 VEGFCP49767 419 aa6.16□□□□□ -1.42
HMGB3P1-201ENST00000393368 EFNB2P52799 333 aa6.16□□□□□ -1.42
HMGB3P1-201ENST00000393368 GNMTQ14749 295 aa6.16□□□□□ -1.42
HMGB3P1-201ENST00000393368 AANATQ16613 207 aa6.16□□□□□ -1.42
HMGB3P1-201ENST00000393368 TMEM95Q3KNT9 176 aa6.16□□□□□ -1.42
HMGB3P1-201ENST00000393368 C2orf76Q3KRA6 126 aa6.16□□□□□ -1.42
HMGB3P1-201ENST00000393368 CD200R1LQ6Q8B3 271 aa6.16□□□□□ -1.42
HMGB3P1-201ENST00000393368 Q6ZS46 218 aa6.16□□□□□ -1.42
HMGB3P1-201ENST00000393368 GAPTQ8N292 157 aa6.16□□□□□ -1.42
HMGB3P1-201ENST00000393368 KCNG3Q8TAE7 436 aa6.16□□□□□ -1.42
HMGB3P1-201ENST00000393368 SETD6Q8TBK2 473 aa6.16□□□□□ -1.42
HMGB3P1-201ENST00000393368 FAM3DQ96BQ1 224 aa6.16□□□□□ -1.42
HMGB3P1-201ENST00000393368 TM2D1Q9BX74 207 aa6.16□□□□□ -1.42
HMGB3P1-201ENST00000393368 YTHDF1Q9BYJ9 559 aaKnown RBP6.16□□□□□ -1.42
HMGB3P1-201ENST00000393368 NCOR1P1Q9H4R4 102 aa6.16□□□□□ -1.42
HMGB3P1-201ENST00000393368 LINC00574Q9H8X3 128 aa6.16□□□□□ -1.42
HMGB3P1-201ENST00000393368 TXNL4BQ9NX01 149 aaKnown RBP6.16□□□□□ -1.42
HMGB3P1-201ENST00000393368 AK3Q9UIJ7 227 aa6.16□□□□□ -1.42
HMGB3P1-201ENST00000393368 V9GY05 133 aa6.16□□□□□ -1.42
HMGB3P1-201ENST00000393368 DSCAML1Q8TD84 2053 aa6.15□□□□□ -1.42
HMGB3P1-201ENST00000393368 IGHV3-72A0A0B4J1Y9 119 aa6.15□□□□□ -1.42
HMGB3P1-201ENST00000393368 FAM90A10PA6NDY2 464 aa6.15□□□□□ -1.42
HMGB3P1-201ENST00000393368 FAM90A18PA6NE21 464 aa6.15□□□□□ -1.42
HMGB3P1-201ENST00000393368 FAM90A16PA6NEW6 464 aa6.15□□□□□ -1.42
HMGB3P1-201ENST00000393368 FAM90A20PA6NIJ5 464 aa6.15□□□□□ -1.42
HMGB3P1-201ENST00000393368 FAM90A7PA6NKC0 464 aa6.15□□□□□ -1.42
HMGB3P1-201ENST00000393368 FOXI3A8MTJ6 420 aaPredicted RBP6.15□□□□□ -1.42
HMGB3P1-201ENST00000393368 FAM90A22PA8MWA6 464 aa6.15□□□□□ -1.42
HMGB3P1-201ENST00000393368 FAM90A12PA8MX19 464 aa6.15□□□□□ -1.42
HMGB3P1-201ENST00000393368 FAM90A5PA8MXJ8 464 aa6.15□□□□□ -1.42
HMGB3P1-201ENST00000393368 FAM90A23PA8MXZ1 464 aa6.15□□□□□ -1.42
HMGB3P1-201ENST00000393368 TIMM23O14925 209 aa6.15□□□□□ -1.42
HMGB3P1-201ENST00000393368 LDLRAD4O15165 306 aa6.15□□□□□ -1.42
HMGB3P1-201ENST00000393368 ORC5O43913 435 aa6.15□□□□□ -1.42
HMGB3P1-201ENST00000393368 TSPAN9O75954 239 aa6.15□□□□□ -1.42
HMGB3P1-201ENST00000393368 CLEC2LP0C7M8 214 aa6.15□□□□□ -1.42
HMGB3P1-201ENST00000393368 FAM90A15PP0C7V4 464 aa6.15□□□□□ -1.42
HMGB3P1-201ENST00000393368 FAM90A13PP0C7W8 464 aa6.15□□□□□ -1.42
HMGB3P1-201ENST00000393368 FAM90A14PP0C7W9 464 aa6.15□□□□□ -1.42
HMGB3P1-201ENST00000393368 FAM90A24PP0C7X0 464 aa6.15□□□□□ -1.42
HMGB3P1-201ENST00000393368 GZMHP20718 246 aa6.15□□□□□ -1.42
HMGB3P1-201ENST00000393368 GADD45AP24522 165 aa6.15□□□□□ -1.42
HMGB3P1-201ENST00000393368 PRRX1P54821 245 aa6.15□□□□□ -1.42
HMGB3P1-201ENST00000393368 LOXL3P58215 753 aa6.15□□□□□ -1.42
HMGB3P1-201ENST00000393368 PROK1P58294 105 aa6.15□□□□□ -1.42
HMGB3P1-201ENST00000393368 RPL15P61313 204 aaKnown RBP6.15□□□□□ -1.42
HMGB3P1-201ENST00000393368 BLCAPP62952 87 aa6.15□□□□□ -1.42
HMGB3P1-201ENST00000393368 MOGAT2Q3SYC2 334 aa6.15□□□□□ -1.42
HMGB3P1-201ENST00000393368 KCTD21Q4G0X4 260 aa6.15□□□□□ -1.42
HMGB3P1-201ENST00000393368 SHISA2Q6UWI4 295 aa6.15□□□□□ -1.42
HMGB3P1-201ENST00000393368 OR2W3Q7Z3T1 314 aa6.15□□□□□ -1.42
HMGB3P1-201ENST00000393368 DRAM1Q8N682 238 aa6.15□□□□□ -1.42
HMGB3P1-201ENST00000393368 C11orf44Q8N8P7 122 aa6.15□□□□□ -1.42
HMGB3P1-201ENST00000393368 OR52L2PQ8NGH6 319 aa6.15□□□□□ -1.42
HMGB3P1-201ENST00000393368 OR4C13Q8NGP0 309 aa6.15□□□□□ -1.42
HMGB3P1-201ENST00000393368 OR10X1Q8NGY0 326 aa6.15□□□□□ -1.42
HMGB3P1-201ENST00000393368 OR56B4Q8NH76 319 aa6.15□□□□□ -1.42
HMGB3P1-201ENST00000393368 FCGR1BQ92637 280 aa6.15□□□□□ -1.42
HMGB3P1-201ENST00000393368 TOMM40LQ969M1 308 aa6.15□□□□□ -1.42
HMGB3P1-201ENST00000393368 RPEQ96AT9 228 aa6.15□□□□□ -1.42
HMGB3P1-201ENST00000393368 ARHGAP5-AS1Q96IT6 56 aa6.15□□□□□ -1.42
HMGB3P1-201ENST00000393368 NEDD4LQ96PU5 975 aa6.15□□□□□ -1.42
HMGB3P1-201ENST00000393368 CHCHD6Q9BRQ6 235 aa6.15□□□□□ -1.42
HMGB3P1-201ENST00000393368 C16orf95Q9H693 158 aa6.15□□□□□ -1.42
HMGB3P1-201ENST00000393368 ZNF702PQ9H963 129 aa6.15□□□□□ -1.42
HMGB3P1-201ENST00000393368 TAF9BQ9HBM6 251 aa6.15□□□□□ -1.42
HMGB3P1-201ENST00000393368 CHMP1AQ9HD42 196 aaPredicted RBP6.15□□□□□ -1.42
HMGB3P1-201ENST00000393368 GFOD1Q9NXC2 390 aa6.15□□□□□ -1.42
HMGB3P1-201ENST00000393368 GNG12Q9UBI6 72 aa6.15□□□□□ -1.42
HMGB3P1-201ENST00000393368 STEAP1Q9UHE8 339 aa6.15□□□□□ -1.42
HMGB3P1-201ENST00000393368 STUB1Q9UNE7 303 aa6.15□□□□□ -1.42
HMGB3P1-201ENST00000393368 MMP24Q9Y5R2 645 aa6.15□□□□□ -1.42
HMGB3P1-201ENST00000393368 A0A075B6Q4 140 aa6.14□□□□□ -1.43
HMGB3P1-201ENST00000393368 TRAV1-2A0A0B4J238 106 aa6.14□□□□□ -1.43
HMGB3P1-201ENST00000393368 LOC100506127A0A0U1RQW1 187 aa6.14□□□□□ -1.43
HMGB3P1-201ENST00000393368 A0A1W2PPI3 338 aa6.14□□□□□ -1.43
HMGB3P1-201ENST00000393368 IFITM5A6NNB3 132 aa6.14□□□□□ -1.43
HMGB3P1-201ENST00000393368 POM121CA8CG34 1229 aa6.14□□□□□ -1.43
HMGB3P1-201ENST00000393368 PDCD5O14737 125 aa6.14□□□□□ -1.43
HMGB3P1-201ENST00000393368 HSD17B6O14756 317 aa6.14□□□□□ -1.43
HMGB3P1-201ENST00000393368 SPINT2O43291 252 aa6.14□□□□□ -1.43
HMGB3P1-201ENST00000393368 SNRNP70P08621 437 aaKnown RBP6.14□□□□□ -1.43
HMGB3P1-201ENST00000393368 VSIG10L2P0DP72 767 aa6.14□□□□□ -1.43
HMGB3P1-201ENST00000393368 CD36P16671 472 aa6.14□□□□□ -1.43
HMGB3P1-201ENST00000393368 RAB3BP20337 219 aa6.14□□□□□ -1.43
HMGB3P1-201ENST00000393368 PPP1CCP36873 323 aaKnown RBP6.14□□□□□ -1.43
HMGB3P1-201ENST00000393368 TGFBR1P36897 503 aa6.14□□□□□ -1.43
HMGB3P1-201ENST00000393368 CEACAM3P40198 252 aa6.14□□□□□ -1.43
HMGB3P1-201ENST00000393368 DYNLT3P51808 116 aa6.14□□□□□ -1.43
HMGB3P1-201ENST00000393368 ZNF134P52741 427 aa6.14□□□□□ -1.43
HMGB3P1-201ENST00000393368 TMEM50BP56557 158 aa6.14□□□□□ -1.43
HMGB3P1-201ENST00000393368 MXD1Q05195 221 aa6.14□□□□□ -1.43
HMGB3P1-201ENST00000393368 MADCAM1Q13477 382 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms