RNA–Protein interactions for RNA: ENST00000381835.9

CIITA-202, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 1 (best) BASIC

Gene CIITA, Length 2,344 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-202ENST00000381835 CD5P06127 495 aa10.53□□□□□ -0.72
CIITA-202ENST00000381835 FCGR3AP08637 254 aa10.53□□□□□ -0.72
CIITA-202ENST00000381835 ALDH3B1P43353 468 aa10.53□□□□□ -0.72
CIITA-202ENST00000381835 SULT1A2P50226 295 aa10.53□□□□□ -0.72
CIITA-202ENST00000381835 KLF3P57682 345 aaPredicted RBP10.53□□□□□ -0.72
CIITA-202ENST00000381835 GNG3P63215 75 aa10.53□□□□□ -0.72
CIITA-202ENST00000381835 IL15RAQ13261 267 aa10.53□□□□□ -0.72
CIITA-202ENST00000381835 RSU1Q15404 277 aa10.53□□□□□ -0.72
CIITA-202ENST00000381835 BTNL8Q6UX41 500 aa10.53□□□□□ -0.72
CIITA-202ENST00000381835 SLC25A26Q70HW3 274 aa10.53□□□□□ -0.72
CIITA-202ENST00000381835 SMCO4Q9NRQ5 59 aa10.53□□□□□ -0.72
CIITA-202ENST00000381835 GHRLQ9UBU3 117 aa10.53□□□□□ -0.72
CIITA-202ENST00000381835 C14orf166Q9Y224 244 aaKnown RBP10.53□□□□□ -0.72
CIITA-202ENST00000381835 IGKV1-12A0A0C4DH73 117 aa10.53□□□□□ -0.72
CIITA-202ENST00000381835 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.53□□□□□ -0.72
CIITA-202ENST00000381835 OR5B21A6NL26 309 aa10.53□□□□□ -0.72
CIITA-202ENST00000381835 IGKV1D-12P01611 117 aa10.53□□□□□ -0.72
CIITA-202ENST00000381835 RPL12P30050 165 aaKnown RBP10.53□□□□□ -0.72
CIITA-202ENST00000381835 Q6ZR03 302 aa10.53□□□□□ -0.72
CIITA-202ENST00000381835 EMG1Q92979 244 aaKnown RBP10.53□□□□□ -0.72
CIITA-202ENST00000381835 KIRREL1Q96J84 757 aa10.53□□□□□ -0.72
CIITA-202ENST00000381835 RTL8AQ9BWD3 113 aa10.53□□□□□ -0.72
CIITA-202ENST00000381835 METTL9Q9H1A3 318 aa10.53□□□□□ -0.72
CIITA-202ENST00000381835 PARP11Q9NR21 331 aa10.53□□□□□ -0.72
CIITA-202ENST00000381835 CHD3Q12873 2000 aaKnown RBP10.53□□□□□ -0.72
CIITA-202ENST00000381835 K7EPK0 472 aa10.52□□□□□ -0.72
CIITA-202ENST00000381835 MLNRO43193 412 aa10.52□□□□□ -0.72
CIITA-202ENST00000381835 EIF3GO75821 320 aaKnown RBP eCLIP10.52□□□□□ -0.72
CIITA-202ENST00000381835 IFNA2P01563 188 aa10.52□□□□□ -0.72
CIITA-202ENST00000381835 RPS2P15880 293 aaKnown RBP10.52□□□□□ -0.72
CIITA-202ENST00000381835 RBMXP38159 391 aaKnown RBP10.52□□□□□ -0.72
CIITA-202ENST00000381835 DVL1P1P54792 670 aaPredicted RBP10.52□□□□□ -0.72
CIITA-202ENST00000381835 F2RL1P55085 397 aa10.52□□□□□ -0.72
CIITA-202ENST00000381835 SNRPEP62304 92 aaKnown RBP10.52□□□□□ -0.72
CIITA-202ENST00000381835 SMCO1Q147U7 214 aa10.52□□□□□ -0.72
CIITA-202ENST00000381835 IAH1Q2TAA2 248 aaPredicted RBP10.52□□□□□ -0.72
CIITA-202ENST00000381835 CHRFAM7AQ494W8 412 aa10.52□□□□□ -0.72
CIITA-202ENST00000381835 NCMAPQ5T1S8 102 aa10.52□□□□□ -0.72
CIITA-202ENST00000381835 DHRS11Q6UWP2 260 aa10.52□□□□□ -0.72
CIITA-202ENST00000381835 Q6ZRG5 221 aa10.52□□□□□ -0.72
CIITA-202ENST00000381835 ZNF808Q8N4W9 903 aaPredicted RBP10.52□□□□□ -0.72
CIITA-202ENST00000381835 FAM71E2Q8N5Q1 922 aa10.52□□□□□ -0.72
CIITA-202ENST00000381835 NUP37Q8NFH4 326 aa10.52□□□□□ -0.72
CIITA-202ENST00000381835 C14orf79Q96F83 325 aa10.52□□□□□ -0.72
CIITA-202ENST00000381835 AKR1E2Q96JD6 320 aa10.52□□□□□ -0.72
CIITA-202ENST00000381835 MRPL37Q9BZE1 423 aaKnown RBP10.52□□□□□ -0.72
CIITA-202ENST00000381835 C1orf123Q9NWV4 160 aa10.52□□□□□ -0.72
CIITA-202ENST00000381835 C9JQL5 133 aa10.52□□□□□ -0.73
CIITA-202ENST00000381835 JTBO76095 146 aa10.52□□□□□ -0.73
CIITA-202ENST00000381835 IGHV3-13P01766 116 aa10.52□□□□□ -0.73
CIITA-202ENST00000381835 BLVRBP30043 206 aaPredicted RBP10.52□□□□□ -0.73
CIITA-202ENST00000381835 SELENOVP59797 346 aa10.52□□□□□ -0.73
CIITA-202ENST00000381835 C15orf54Q8N8G6 183 aa10.52□□□□□ -0.73
CIITA-202ENST00000381835 GTF3AQ92664 365 aaKnown RBP10.52□□□□□ -0.73
CIITA-202ENST00000381835 SLAMF9Q96A28 289 aa10.52□□□□□ -0.73
CIITA-202ENST00000381835 EDARQ9UNE0 448 aa10.52□□□□□ -0.73
CIITA-202ENST00000381835 CACNA1DQ01668 2161 aa10.52□□□□□ -0.73
CIITA-202ENST00000381835 CHD6Q8TD26 2715 aa10.51□□□□□ -0.73
CIITA-202ENST00000381835 COL12A1Q99715 3063 aa10.51□□□□□ -0.73
CIITA-202ENST00000381835 C1orf196B1AJZ1 125 aa10.51□□□□□ -0.73
CIITA-202ENST00000381835 GRPP07492 148 aa10.51□□□□□ -0.73
CIITA-202ENST00000381835 CD3EP07766 207 aa10.51□□□□□ -0.73
CIITA-202ENST00000381835 FOLR2P14207 255 aa10.51□□□□□ -0.73
CIITA-202ENST00000381835 AGAP20933 346 aa10.51□□□□□ -0.73
CIITA-202ENST00000381835 FCGR2CP31995 323 aa10.51□□□□□ -0.73
CIITA-202ENST00000381835 HABP2Q14520 560 aaPredicted RBP10.51□□□□□ -0.73
CIITA-202ENST00000381835 SURF2Q15527 256 aaPredicted RBP10.51□□□□□ -0.73
CIITA-202ENST00000381835 Q3ZCU0 254 aa10.51□□□□□ -0.73
CIITA-202ENST00000381835 TMEM268Q5VZI3 342 aa10.51□□□□□ -0.73
CIITA-202ENST00000381835 ETV3LQ6ZN32 361 aa10.51□□□□□ -0.73
CIITA-202ENST00000381835 WDR86Q86TI4 376 aa10.51□□□□□ -0.73
CIITA-202ENST00000381835 ZNF573Q86YE8 665 aa10.51□□□□□ -0.73
CIITA-202ENST00000381835 CLCC1Q96S66 551 aa10.51□□□□□ -0.73
CIITA-202ENST00000381835 SMIM3Q9BZL3 60 aa10.51□□□□□ -0.73
CIITA-202ENST00000381835 ZNF701Q9NV72 531 aaPredicted RBP10.51□□□□□ -0.73
CIITA-202ENST00000381835 TAAR3PQ9P1P4 343 aa10.51□□□□□ -0.73
CIITA-202ENST00000381835 FBXL17Q9UF56 701 aa10.51□□□□□ -0.73
CIITA-202ENST00000381835 POMT1Q9Y6A1 747 aa10.51□□□□□ -0.73
CIITA-202ENST00000381835 KMT2BQ9UMN6 2715 aaPredicted RBP10.51□□□□□ -0.73
CIITA-202ENST00000381835 FAM208BQ5VWN6 2430 aa10.51□□□□□ -0.73
CIITA-202ENST00000381835 IGLV3-9A0A075B6K5 115 aa10.51□□□□□ -0.73
CIITA-202ENST00000381835 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.51□□□□□ -0.73
CIITA-202ENST00000381835 SYNGR1O43759 233 aa10.51□□□□□ -0.73
CIITA-202ENST00000381835 OR8U9P0C7N5 309 aa10.51□□□□□ -0.73
CIITA-202ENST00000381835 CPT2P23786 658 aa10.51□□□□□ -0.73
CIITA-202ENST00000381835 AKR1C3P42330 323 aa10.51□□□□□ -0.73
CIITA-202ENST00000381835 NPBWR2P48146 333 aa10.51□□□□□ -0.73
CIITA-202ENST00000381835 PPT1P50897 306 aa10.51□□□□□ -0.73
CIITA-202ENST00000381835 ZNF154Q13106 437 aa10.51□□□□□ -0.73
CIITA-202ENST00000381835 FAM89BQ8N5H3 189 aa10.51□□□□□ -0.73
CIITA-202ENST00000381835 OR2Z1Q8NG97 314 aa10.51□□□□□ -0.73
CIITA-202ENST00000381835 OR8U1Q8NH10 309 aa10.51□□□□□ -0.73
CIITA-202ENST00000381835 NEUROG1Q92886 237 aa10.51□□□□□ -0.73
CIITA-202ENST00000381835 MRPL24Q96A35 216 aaKnown RBP10.51□□□□□ -0.73
CIITA-202ENST00000381835 PECRQ9BY49 303 aa10.51□□□□□ -0.73
CIITA-202ENST00000381835 OR51I2Q9H344 312 aa10.51□□□□□ -0.73
CIITA-202ENST00000381835 RPS10P5Q9NQ39 176 aa10.51□□□□□ -0.73
CIITA-202ENST00000381835 PLA2G2EQ9NZK7 142 aa10.51□□□□□ -0.73
CIITA-202ENST00000381835 CACFD1Q9UGQ2 172 aa10.51□□□□□ -0.73
CIITA-202ENST00000381835 KPTNQ9Y664 436 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms