RNA–Protein interactions for RNA: ENST00000381431.9

SGCB-201, Transcript of sarcoglycan beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCB, Length 4,431 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-201ENST00000381431 PPP1CCP36873 323 aaKnown RBP14.89□□□□□ -0.03
SGCB-201ENST00000381431 RPS11P62280 158 aaKnown RBP eCLIP14.89□□□□□ -0.03
SGCB-201ENST00000381431 CXorf66Q5JRM2 361 aaPredicted RBP14.89□□□□□ -0.03
SGCB-201ENST00000381431 TMEM252Q8N6L7 170 aa14.89□□□□□ -0.03
SGCB-201ENST00000381431 C5orf66Q9H5L9 145 aa14.89□□□□□ -0.03
SGCB-201ENST00000381431 DIDO1Q9BTC0 2240 aaKnown RBP14.89□□□□□ -0.03
SGCB-201ENST00000381431 C21orf140B9A014 251 aa14.89□□□□□ -0.03
SGCB-201ENST00000381431 H3BQ15 152 aa14.89□□□□□ -0.03
SGCB-201ENST00000381431 SP1P08047 785 aa14.89□□□□□ -0.03
SGCB-201ENST00000381431 HIST1H3AP68431 136 aa14.89□□□□□ -0.03
SGCB-201ENST00000381431 TMEM108Q6UXF1 575 aa14.89□□□□□ -0.03
SGCB-201ENST00000381431 APCDD1LQ8NCL9 501 aa14.89□□□□□ -0.03
SGCB-201ENST00000381431 MISP3Q96FF7 219 aa14.89□□□□□ -0.03
SGCB-201ENST00000381431 TMEM56Q96MV1 263 aa14.89□□□□□ -0.03
SGCB-201ENST00000381431 PARP11Q9NR21 331 aa14.89□□□□□ -0.03
SGCB-201ENST00000381431 OR6C3Q9NZP0 311 aa14.89□□□□□ -0.03
SGCB-201ENST00000381431 ANK1P16157 1881 aa14.89□□□□□ -0.03
SGCB-201ENST00000381431 DHRS7CA6NNS2 312 aa14.88□□□□□ -0.03
SGCB-201ENST00000381431 AP4M1O00189 453 aa14.88□□□□□ -0.03
SGCB-201ENST00000381431 F2RP25116 425 aa14.88□□□□□ -0.03
SGCB-201ENST00000381431 ZNF236Q9UL36 1845 aa14.88□□□□□ -0.03
SGCB-201ENST00000381431 IGHV1-45A0A0A0MS14 117 aa14.88□□□□□ -0.03
SGCB-201ENST00000381431 MFNGO00587 321 aa14.88□□□□□ -0.03
SGCB-201ENST00000381431 COX7A1P24310 79 aa14.88□□□□□ -0.03
SGCB-201ENST00000381431 NAAAQ02083 359 aa14.88□□□□□ -0.03
SGCB-201ENST00000381431 TGIF1Q15583 401 aa14.88□□□□□ -0.03
SGCB-201ENST00000381431 XKRY2A2RUG3 117 aa14.88□□□□□ -0.03
SGCB-201ENST00000381431 RAB5AP20339 215 aa14.88□□□□□ -0.03
SGCB-201ENST00000381431 TLNRD1Q9H1K6 362 aa14.88□□□□□ -0.03
SGCB-201ENST00000381431 BARX1Q9HBU1 254 aaPredicted RBP14.88□□□□□ -0.03
SGCB-201ENST00000381431 NYNRINQ9P2P1 1898 aaKnown RBP14.88□□□□□ -0.03
SGCB-201ENST00000381431 ST8SIA5O15466 376 aa14.87□□□□□ -0.03
SGCB-201ENST00000381431 EIF3GO75821 320 aaKnown RBP eCLIP14.87□□□□□ -0.03
SGCB-201ENST00000381431 ZP1P60852 638 aa14.87□□□□□ -0.03
SGCB-201ENST00000381431 ZNF273Q14593 569 aa14.87□□□□□ -0.03
SGCB-201ENST00000381431 SAP25Q8TEE9 199 aa14.87□□□□□ -0.03
SGCB-201ENST00000381431 SNX22Q96L94 193 aa14.87□□□□□ -0.03
SGCB-201ENST00000381431 ABCA4P78363 2273 aa14.87□□□□□ -0.03
SGCB-201ENST00000381431 A0A1W2PPE3 182 aa14.87□□□□□ -0.03
SGCB-201ENST00000381431 KIAA1324LA8MWY0 1029 aaPredicted RBP14.87□□□□□ -0.03
SGCB-201ENST00000381431 GNB2P62879 340 aa14.87□□□□□ -0.03
SGCB-201ENST00000381431 TOMM20LQ6UXN7 152 aa14.87□□□□□ -0.03
SGCB-201ENST00000381431 HSD17B10Q99714 261 aaKnown RBP14.87□□□□□ -0.03
SGCB-201ENST00000381431 HES7Q9BYE0 225 aa14.87□□□□□ -0.03
SGCB-201ENST00000381431 PRSS50Q9UI38 385 aa14.87□□□□□ -0.03
SGCB-201ENST00000381431 hADV38S2A0JD32 116 aa14.87□□□□□ -0.03
SGCB-201ENST00000381431 SYNGR1O43759 233 aa14.87□□□□□ -0.03
SGCB-201ENST00000381431 OR2A4O95047 310 aa14.87□□□□□ -0.03
SGCB-201ENST00000381431 MBPP02686 304 aaPredicted RBP14.87□□□□□ -0.03
SGCB-201ENST00000381431 RHOBP62745 196 aa14.87□□□□□ -0.03
SGCB-201ENST00000381431 PAX5Q02548 391 aa14.87□□□□□ -0.03
SGCB-201ENST00000381431 SHISA5Q8N114 240 aa14.87□□□□□ -0.03
SGCB-201ENST00000381431 OR2A7Q96R45 310 aa14.87□□□□□ -0.03
SGCB-201ENST00000381431 RNF122Q9H9V4 155 aa14.87□□□□□ -0.03
SGCB-201ENST00000381431 A0A1W2PRD5 423 aa14.86□□□□□ -0.03
SGCB-201ENST00000381431 A0A1W2PRF3 423 aa14.86□□□□□ -0.03
SGCB-201ENST00000381431 A0A1W2PRM7 423 aa14.86□□□□□ -0.03
SGCB-201ENST00000381431 OOEPA6NGQ2 149 aa14.86□□□□□ -0.03
SGCB-201ENST00000381431 GYPAP02724 150 aa14.86□□□□□ -0.03
SGCB-201ENST00000381431 RBP4P02753 201 aa14.86□□□□□ -0.03
SGCB-201ENST00000381431 PRF1P14222 555 aa14.86□□□□□ -0.03
SGCB-201ENST00000381431 MDKP21741 143 aaPredicted RBP14.86□□□□□ -0.03
SGCB-201ENST00000381431 ID4P47928 161 aa14.86□□□□□ -0.03
SGCB-201ENST00000381431 RAB7AP51149 207 aa14.86□□□□□ -0.03
SGCB-201ENST00000381431 FDX2Q6P4F2 183 aa14.86□□□□□ -0.03
SGCB-201ENST00000381431 DNASE2BQ8WZ79 361 aa14.86□□□□□ -0.03
SGCB-201ENST00000381431 ATP6V1FQ16864 119 aa14.86□□□□□ -0.03
SGCB-201ENST00000381431 OR4A4PQ8NGN8 299 aa14.86□□□□□ -0.03
SGCB-201ENST00000381431 OR4S2Q8NH73 311 aa14.86□□□□□ -0.03
SGCB-201ENST00000381431 RSG1Q9BU20 258 aa14.86□□□□□ -0.03
SGCB-201ENST00000381431 CLN8Q9UBY8 286 aa14.86□□□□□ -0.03
SGCB-201ENST00000381431 PAGE4O60829 102 aa14.86□□□□□ -0.03
SGCB-201ENST00000381431 GZMHP20718 246 aa14.86□□□□□ -0.03
SGCB-201ENST00000381431 ARL16Q0P5N6 197 aa14.86□□□□□ -0.03
SGCB-201ENST00000381431 PMS2P11Q13670 270 aa14.86□□□□□ -0.03
SGCB-201ENST00000381431 C2orf68Q2NKX9 166 aa14.86□□□□□ -0.03
SGCB-201ENST00000381431 LAMTOR1Q6IAA8 161 aa14.86□□□□□ -0.03
SGCB-201ENST00000381431 BLNKQ8WV28 456 aa14.86□□□□□ -0.03
SGCB-201ENST00000381431 MOB3AQ96BX8 217 aa14.86□□□□□ -0.03
SGCB-201ENST00000381431 Q9N2K0 584 aa14.86□□□□□ -0.03
SGCB-201ENST00000381431 C11orf94C9JXX5 98 aa14.86□□□□□ -0.03
SGCB-201ENST00000381431 FCN1O00602 326 aa14.86□□□□□ -0.03
SGCB-201ENST00000381431 FGF2P09038 288 aa14.86□□□□□ -0.03
SGCB-201ENST00000381431 IZUMO4Q1ZYL8 232 aa14.86□□□□□ -0.03
SGCB-201ENST00000381431 FNDC7Q5VTL7 733 aa14.86□□□□□ -0.03
SGCB-201ENST00000381431 ZNF826PQ6ZT77 177 aa14.86□□□□□ -0.03
SGCB-201ENST00000381431 C1QL2Q7Z5L3 287 aa14.86□□□□□ -0.03
SGCB-201ENST00000381431 IER2Q9BTL4 223 aa14.86□□□□□ -0.03
SGCB-201ENST00000381431 NCBP2LA6PVI3 153 aaKnown RBP14.85□□□□□ -0.03
SGCB-201ENST00000381431 TMEM14DPA8MWL7 114 aa14.85□□□□□ -0.03
SGCB-201ENST00000381431 M0R296 226 aa14.85□□□□□ -0.03
SGCB-201ENST00000381431 FGF5P12034 268 aa14.85□□□□□ -0.03
SGCB-201ENST00000381431 TCL1AP56279 114 aa14.85□□□□□ -0.03
SGCB-201ENST00000381431 NHLRC3Q5JS37 347 aa14.85□□□□□ -0.03
SGCB-201ENST00000381431 SSX7Q7RTT5 188 aa14.85□□□□□ -0.03
SGCB-201ENST00000381431 MYPOPQ86VE0 399 aaPredicted RBP14.85□□□□□ -0.03
SGCB-201ENST00000381431 OR2T10Q8NGZ9 312 aa14.85□□□□□ -0.03
SGCB-201ENST00000381431 RPEQ96AT9 228 aa14.85□□□□□ -0.03
SGCB-201ENST00000381431 IGHV3OR15-7A0A075B7D8 119 aa14.85□□□□□ -0.03
SGCB-201ENST00000381431 FAM90A27PA6NNH2 459 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms