RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 M0R2Z0 102 aa13.98□□□□□ -0.17
COL2A1-202ENST00000380518 HLA-DQB1P01920 261 aa13.98□□□□□ -0.17
COL2A1-202ENST00000380518 OR4X1Q8NH49 305 aa13.98□□□□□ -0.17
COL2A1-202ENST00000380518 Q8WTZ3 238 aa13.98□□□□□ -0.17
COL2A1-202ENST00000380518 OR2J1Q9GZK6 312 aa13.98□□□□□ -0.17
COL2A1-202ENST00000380518 KCNK7Q9Y2U2 307 aa13.98□□□□□ -0.17
COL2A1-202ENST00000380518 CDX4O14627 284 aaPredicted RBP13.98□□□□□ -0.17
COL2A1-202ENST00000380518 RPL30P62888 115 aaKnown RBP13.98□□□□□ -0.17
COL2A1-202ENST00000380518 ROM1Q03395 351 aa13.98□□□□□ -0.17
COL2A1-202ENST00000380518 AESQ08117 197 aa13.98□□□□□ -0.17
COL2A1-202ENST00000380518 ADAMTS7Q9UKP4 1686 aa13.98□□□□□ -0.17
COL2A1-202ENST00000380518 TSPAN2O60636 221 aa13.98□□□□□ -0.17
COL2A1-202ENST00000380518 CXorf1O96002 111 aa13.98□□□□□ -0.17
COL2A1-202ENST00000380518 CSN3P07498 182 aa13.98□□□□□ -0.17
COL2A1-202ENST00000380518 C1orf174Q8IYL3 243 aa13.98□□□□□ -0.17
COL2A1-202ENST00000380518 MRPL30Q8TCC3 161 aaKnown RBP13.98□□□□□ -0.17
COL2A1-202ENST00000380518 GHITMQ9H3K2 345 aa13.98□□□□□ -0.17
COL2A1-202ENST00000380518 TRBV5-5A0A0J9YX44 114 aa13.98□□□□□ -0.17
COL2A1-202ENST00000380518 HELTA6NFD8 242 aa13.98□□□□□ -0.17
COL2A1-202ENST00000380518 C16orf97H3BN30 126 aa13.98□□□□□ -0.17
COL2A1-202ENST00000380518 OR8I2Q8N0Y5 310 aa13.98□□□□□ -0.17
COL2A1-202ENST00000380518 RFLNBQ8N5W9 214 aa13.98□□□□□ -0.17
COL2A1-202ENST00000380518 SNX22Q96L94 193 aa13.98□□□□□ -0.17
COL2A1-202ENST00000380518 NUDT16L1Q9BRJ7 211 aaKnown RBP13.98□□□□□ -0.17
COL2A1-202ENST00000380518 TTTY12Q9BZ98 90 aa13.98□□□□□ -0.17
COL2A1-202ENST00000380518 BET1LQ9NYM9 111 aa13.98□□□□□ -0.17
COL2A1-202ENST00000380518 PRSS1P07477 247 aa13.97□□□□□ -0.17
COL2A1-202ENST00000380518 RIGQ13278 110 aa13.97□□□□□ -0.17
COL2A1-202ENST00000380518 C10orf113Q5VZT2 155 aa13.97□□□□□ -0.17
COL2A1-202ENST00000380518 DPF1Q92782 380 aa13.97□□□□□ -0.17
COL2A1-202ENST00000380518 SCN3AQ9NY46 2000 aa13.97□□□□□ -0.17
COL2A1-202ENST00000380518 M0R143 59 aa13.97□□□□□ -0.17
COL2A1-202ENST00000380518 IFI6P09912 130 aa13.97□□□□□ -0.17
COL2A1-202ENST00000380518 KHDC3LQ587J8 217 aa13.97□□□□□ -0.17
COL2A1-202ENST00000380518 DPPA3Q6W0C5 159 aa13.97□□□□□ -0.17
COL2A1-202ENST00000380518 NPAS1Q99742 590 aa13.97□□□□□ -0.17
COL2A1-202ENST00000380518 SMDT1Q9H4I9 107 aa13.97□□□□□ -0.17
COL2A1-202ENST00000380518 ELF5Q9UKW6 265 aaPredicted RBP13.97□□□□□ -0.17
COL2A1-202ENST00000380518 GCM2O75603 506 aaPredicted RBP13.97□□□□□ -0.17
COL2A1-202ENST00000380518 UFC1Q9Y3C8 167 aa13.97□□□□□ -0.17
COL2A1-202ENST00000380518 PTBP3O95758 552 aaKnown RBP13.97□□□□□ -0.17
COL2A1-202ENST00000380518 PSG4Q00888 419 aa13.97□□□□□ -0.17
COL2A1-202ENST00000380518 RTP5Q14D33 572 aa13.97□□□□□ -0.17
COL2A1-202ENST00000380518 ZNF880Q6PDB4 577 aa13.97□□□□□ -0.17
COL2A1-202ENST00000380518 LAMB2P55268 1798 aa13.96□□□□□ -0.17
COL2A1-202ENST00000380518 J3QR06 171 aa13.96□□□□□ -0.17
COL2A1-202ENST00000380518 PITX3O75364 302 aa13.96□□□□□ -0.17
COL2A1-202ENST00000380518 VSIG10L2P0DP72 767 aa13.96□□□□□ -0.17
COL2A1-202ENST00000380518 FUT5Q11128 374 aa13.96□□□□□ -0.17
COL2A1-202ENST00000380518 TMUB1Q9BVT8 246 aa13.96□□□□□ -0.17
COL2A1-202ENST00000380518 ASXL3Q9C0F0 2248 aa13.96□□□□□ -0.17
COL2A1-202ENST00000380518 SVILO95425 2214 aa13.96□□□□□ -0.17
COL2A1-202ENST00000380518 PPP1CCP36873 323 aaKnown RBP13.96□□□□□ -0.17
COL2A1-202ENST00000380518 CEACAM21Q3KPI0 293 aa13.96□□□□□ -0.17
COL2A1-202ENST00000380518 TMEM255AQ5JRV8 349 aa13.96□□□□□ -0.17
COL2A1-202ENST00000380518 VWA1Q6PCB0 445 aa13.96□□□□□ -0.17
COL2A1-202ENST00000380518 SSX8Q7RTT4 187 aa13.96□□□□□ -0.17
COL2A1-202ENST00000380518 DOLPP1Q86YN1 238 aa13.96□□□□□ -0.17
COL2A1-202ENST00000380518 TMEM116Q8NCL8 245 aa13.96□□□□□ -0.17
COL2A1-202ENST00000380518 OR5R1Q8NH85 324 aa13.96□□□□□ -0.17
COL2A1-202ENST00000380518 PACRGQ96M98 296 aaPredicted RBP13.96□□□□□ -0.17
COL2A1-202ENST00000380518 NPTNQ9Y639 398 aa13.96□□□□□ -0.17
COL2A1-202ENST00000380518 SERF2P84101 59 aa13.96□□□□□ -0.17
COL2A1-202ENST00000380518 OR1K1Q8NGR3 316 aa13.96□□□□□ -0.17
COL2A1-202ENST00000380518 CLN8Q9UBY8 286 aa13.96□□□□□ -0.17
COL2A1-202ENST00000380518 SMIM6P0DI80 62 aa13.96□□□□□ -0.18
COL2A1-202ENST00000380518 DGAT2L7PQ6IED9 249 aa13.96□□□□□ -0.18
COL2A1-202ENST00000380518 ASCL3Q9NQ33 180 aa13.96□□□□□ -0.18
COL2A1-202ENST00000380518 WIPI2Q9Y4P8 454 aa13.96□□□□□ -0.18
COL2A1-202ENST00000380518 SRSF10O75494 262 aaKnown RBP13.95□□□□□ -0.18
COL2A1-202ENST00000380518 DEDDO75618 318 aa13.95□□□□□ -0.18
COL2A1-202ENST00000380518 PMS2CLQ68D20 193 aa13.95□□□□□ -0.18
COL2A1-202ENST00000380518 FDX2Q6P4F2 183 aa13.95□□□□□ -0.18
COL2A1-202ENST00000380518 H1FOOQ8IZA3 346 aaPredicted RBP13.95□□□□□ -0.18
COL2A1-202ENST00000380518 FBLIM1Q8WUP2 373 aa13.95□□□□□ -0.18
COL2A1-202ENST00000380518 DSPPQ9NZW4 1301 aa13.95□□□□□ -0.18
COL2A1-202ENST00000380518 PRDX2P32119 198 aa13.95□□□□□ -0.18
COL2A1-202ENST00000380518 FGF12P61328 243 aa13.95□□□□□ -0.18
COL2A1-202ENST00000380518 RPL31P62899 125 aaKnown RBP13.95□□□□□ -0.18
COL2A1-202ENST00000380518 MRPL54Q6P161 138 aaKnown RBP13.95□□□□□ -0.18
COL2A1-202ENST00000380518 SLC22A18ASQ8N1D0 253 aa13.95□□□□□ -0.18
COL2A1-202ENST00000380518 FUT9Q9Y231 359 aa13.95□□□□□ -0.18
COL2A1-202ENST00000380518 GAPDHP04406 335 aaKnown RBP13.95□□□□□ -0.18
COL2A1-202ENST00000380518 OR1L6Q8NGR2 347 aa13.95□□□□□ -0.18
COL2A1-202ENST00000380518 ZNF488Q96MN9 340 aa13.95□□□□□ -0.18
COL2A1-202ENST00000380518 SPAARA0A1B0GVQ0 90 aa13.95□□□□□ -0.18
COL2A1-202ENST00000380518 GREM1O60565 184 aa13.95□□□□□ -0.18
COL2A1-202ENST00000380518 SMPD2O60906 423 aa13.95□□□□□ -0.18
COL2A1-202ENST00000380518 LYRM7Q5U5X0 104 aa13.95□□□□□ -0.18
COL2A1-202ENST00000380518 CD200R1LQ6Q8B3 271 aa13.95□□□□□ -0.18
COL2A1-202ENST00000380518 Q6ZN92 141 aa13.95□□□□□ -0.18
COL2A1-202ENST00000380518 LILRB1Q8NHL6 650 aaPredicted RBP13.95□□□□□ -0.18
COL2A1-202ENST00000380518 MGST3O14880 152 aa13.94□□□□□ -0.18
COL2A1-202ENST00000380518 IL11P20809 199 aa13.94□□□□□ -0.18
COL2A1-202ENST00000380518 HOXA6P31267 233 aa13.94□□□□□ -0.18
COL2A1-202ENST00000380518 FOXL2P58012 376 aa13.94□□□□□ -0.18
COL2A1-202ENST00000380518 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.94□□□□□ -0.18
COL2A1-202ENST00000380518 ADAMTS17Q8TE56 1095 aa13.94□□□□□ -0.18
COL2A1-202ENST00000380518 MARS2Q96GW9 593 aaKnown RBP13.94□□□□□ -0.18
COL2A1-202ENST00000380518 UNC13CQ8NB66 2214 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms