RNA–Protein interactions for RNA: ENST00000378307.9

RAB4B-202, Transcript of RAB4B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB4B, Length 890 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4B-202ENST00000378307 HTR2CP28335 458 aa12.28□□□□□ -0.44
RAB4B-202ENST00000378307 RPS27AP62979 156 aaKnown RBP12.28□□□□□ -0.44
RAB4B-202ENST00000378307 TBCEQ15813 527 aaPredicted RBP12.28□□□□□ -0.44
RAB4B-202ENST00000378307 SLC16A12Q6ZSM3 486 aa12.28□□□□□ -0.44
RAB4B-202ENST00000378307 LYG1Q8N1E2 194 aa12.28□□□□□ -0.44
RAB4B-202ENST00000378307 OR52M1Q8NGK5 317 aa12.28□□□□□ -0.44
RAB4B-202ENST00000378307 TOMM40LQ969M1 308 aa12.28□□□□□ -0.44
RAB4B-202ENST00000378307 RPEQ96AT9 228 aa12.28□□□□□ -0.44
RAB4B-202ENST00000378307 CREB3L1Q96BA8 519 aa12.28□□□□□ -0.44
RAB4B-202ENST00000378307 SULT4A1Q9BR01 284 aa12.28□□□□□ -0.44
RAB4B-202ENST00000378307 SLC25A33Q9BSK2 321 aa12.28□□□□□ -0.44
RAB4B-202ENST00000378307 PRSS22Q9GZN4 317 aa12.28□□□□□ -0.44
RAB4B-202ENST00000378307 WNT10AQ9GZT5 417 aa12.28□□□□□ -0.44
RAB4B-202ENST00000378307 ACOT13Q9NPJ3 140 aa12.28□□□□□ -0.44
RAB4B-202ENST00000378307 GFOD1Q9NXC2 390 aa12.28□□□□□ -0.44
RAB4B-202ENST00000378307 TRAPPC2LQ9UL33 140 aa12.28□□□□□ -0.44
RAB4B-202ENST00000378307 OOSP1A8MZH6 123 aa12.27□□□□□ -0.45
RAB4B-202ENST00000378307 UBBP0CG47 229 aa12.27□□□□□ -0.45
RAB4B-202ENST00000378307 CD28P10747 220 aa12.27□□□□□ -0.45
RAB4B-202ENST00000378307 CHATP28329 748 aa12.27□□□□□ -0.45
RAB4B-202ENST00000378307 ZNF134P52741 427 aa12.27□□□□□ -0.45
RAB4B-202ENST00000378307 EMX1Q04741 257 aaPredicted RBP12.27□□□□□ -0.45
RAB4B-202ENST00000378307 MADCAM1Q13477 382 aa12.27□□□□□ -0.45
RAB4B-202ENST00000378307 P2RY14Q15391 338 aa12.27□□□□□ -0.45
RAB4B-202ENST00000378307 NKAPLQ5M9Q1 402 aa12.27□□□□□ -0.45
RAB4B-202ENST00000378307 Q6ZPA2 131 aa12.27□□□□□ -0.45
RAB4B-202ENST00000378307 C6orf201Q7Z4U5 140 aa12.27□□□□□ -0.45
RAB4B-202ENST00000378307 PRR18Q8N4B5 295 aa12.27□□□□□ -0.45
RAB4B-202ENST00000378307 DRAM1Q8N682 238 aa12.27□□□□□ -0.45
RAB4B-202ENST00000378307 OR56B4Q8NH76 319 aa12.27□□□□□ -0.45
RAB4B-202ENST00000378307 FAM110DQ8TAY7 271 aaPredicted RBP12.27□□□□□ -0.45
RAB4B-202ENST00000378307 MRPL30Q8TCC3 161 aaKnown RBP12.27□□□□□ -0.45
RAB4B-202ENST00000378307 CAPSLQ8WWF8 208 aa12.27□□□□□ -0.45
RAB4B-202ENST00000378307 RBM14Q96PK6 669 aaKnown RBP12.27□□□□□ -0.45
RAB4B-202ENST00000378307 FAAP24Q9BTP7 215 aa12.27□□□□□ -0.45
RAB4B-202ENST00000378307 CST11Q9H112 138 aa12.27□□□□□ -0.45
RAB4B-202ENST00000378307 LIN7BQ9HAP6 207 aa12.27□□□□□ -0.45
RAB4B-202ENST00000378307 AMMECR1Q9Y4X0 333 aaPredicted RBP12.27□□□□□ -0.45
RAB4B-202ENST00000378307 SHISA3A0PJX4 238 aa12.26□□□□□ -0.45
RAB4B-202ENST00000378307 DENRO43583 198 aaKnown RBP12.26□□□□□ -0.45
RAB4B-202ENST00000378307 OR2F2O95006 317 aa12.26□□□□□ -0.45
RAB4B-202ENST00000378307 HBZP02008 142 aa12.26□□□□□ -0.45
RAB4B-202ENST00000378307 GLAP06280 429 aa12.26□□□□□ -0.45
RAB4B-202ENST00000378307 SNRNP70P08621 437 aaKnown RBP12.26□□□□□ -0.45
RAB4B-202ENST00000378307 CALRP27797 417 aaKnown RBP12.26□□□□□ -0.45
RAB4B-202ENST00000378307 MNDAP41218 407 aa12.26□□□□□ -0.45
RAB4B-202ENST00000378307 REG1BP48304 166 aa12.26□□□□□ -0.45
RAB4B-202ENST00000378307 CLDN12P56749 244 aa12.26□□□□□ -0.45
RAB4B-202ENST00000378307 PLA2G7Q13093 441 aa12.26□□□□□ -0.45
RAB4B-202ENST00000378307 ABCA11PQ4W5N1 156 aa12.26□□□□□ -0.45
RAB4B-202ENST00000378307 C11orf88Q6PI97 169 aa12.26□□□□□ -0.45
RAB4B-202ENST00000378307 Q6ZTK2 550 aa12.26□□□□□ -0.45
RAB4B-202ENST00000378307 ZNF367Q7RTV3 350 aa12.26□□□□□ -0.45
RAB4B-202ENST00000378307 LINC00311Q8N616 119 aa12.26□□□□□ -0.45
RAB4B-202ENST00000378307 ZNF439Q8NDP4 499 aa12.26□□□□□ -0.45
RAB4B-202ENST00000378307 OR10V1Q8NGI7 309 aa12.26□□□□□ -0.45
RAB4B-202ENST00000378307 OR6M1Q8NGM8 313 aa12.26□□□□□ -0.45
RAB4B-202ENST00000378307 OR10X1Q8NGY0 326 aa12.26□□□□□ -0.45
RAB4B-202ENST00000378307 TM2D1Q9BX74 207 aa12.26□□□□□ -0.45
RAB4B-202ENST00000378307 TMEM59Q9BXS4 323 aa12.26□□□□□ -0.45
RAB4B-202ENST00000378307 LPAR5Q9H1C0 372 aa12.26□□□□□ -0.45
RAB4B-202ENST00000378307 MMP27Q9H306 513 aa12.26□□□□□ -0.45
RAB4B-202ENST00000378307 TAF9BQ9HBM6 251 aa12.26□□□□□ -0.45
RAB4B-202ENST00000378307 MBNL3Q9NUK0 354 aaKnown RBP12.26□□□□□ -0.45
RAB4B-202ENST00000378307 SLC17A2O00624 439 aa12.25□□□□□ -0.45
RAB4B-202ENST00000378307 BPNT1O95861 308 aa12.25□□□□□ -0.45
RAB4B-202ENST00000378307 PSMA1P25786 263 aaKnown RBP12.25□□□□□ -0.45
RAB4B-202ENST00000378307 GNMTQ14749 295 aa12.25□□□□□ -0.45
RAB4B-202ENST00000378307 TRAM1Q15629 374 aa12.25□□□□□ -0.45
RAB4B-202ENST00000378307 CT45A1Q5HYN5 189 aa12.25□□□□□ -0.45
RAB4B-202ENST00000378307 CCDC144NLQ6NUI1 221 aa12.25□□□□□ -0.45
RAB4B-202ENST00000378307 C16orf82Q7Z2V1 217 aa12.25□□□□□ -0.45
RAB4B-202ENST00000378307 THNSL2Q86YJ6 484 aa12.25□□□□□ -0.45
RAB4B-202ENST00000378307 CT45A3Q8NHU0 189 aa12.25□□□□□ -0.45
RAB4B-202ENST00000378307 KCNG3Q8TAE7 436 aa12.25□□□□□ -0.45
RAB4B-202ENST00000378307 ST6GALNAC6Q969X2 333 aa12.25□□□□□ -0.45
RAB4B-202ENST00000378307 IGHV3-72A0A0B4J1Y9 119 aa12.24□□□□□ -0.45
RAB4B-202ENST00000378307 IGHV1-3A0A0C4DH29 117 aa12.24□□□□□ -0.45
RAB4B-202ENST00000378307 ADARB2-AS1A8MUL3 147 aa12.24□□□□□ -0.45
RAB4B-202ENST00000378307 CCRL2O00421 344 aa12.24□□□□□ -0.45
RAB4B-202ENST00000378307 HSD17B6O14756 317 aa12.24□□□□□ -0.45
RAB4B-202ENST00000378307 SOCS1O15524 211 aa12.24□□□□□ -0.45
RAB4B-202ENST00000378307 SPINT2O43291 252 aa12.24□□□□□ -0.45
RAB4B-202ENST00000378307 KCNAB3O43448 404 aa12.24□□□□□ -0.45
RAB4B-202ENST00000378307 CA11O75493 328 aa12.24□□□□□ -0.45
RAB4B-202ENST00000378307 ARL6IP5O75915 188 aa12.24□□□□□ -0.45
RAB4B-202ENST00000378307 LPLP06858 475 aa12.24□□□□□ -0.45
RAB4B-202ENST00000378307 VDAC2P45880 294 aaPredicted RBP12.24□□□□□ -0.45
RAB4B-202ENST00000378307 ARHGDIBP52566 201 aa12.24□□□□□ -0.45
RAB4B-202ENST00000378307 ZNF816Q0VGE8 651 aaPredicted RBP12.24□□□□□ -0.45
RAB4B-202ENST00000378307 HNF4GQ14541 408 aa12.24□□□□□ -0.45
RAB4B-202ENST00000378307 C6orf183Q5T699 404 aa12.24□□□□□ -0.45
RAB4B-202ENST00000378307 C10orf99Q6UWK7 81 aa12.24□□□□□ -0.45
RAB4B-202ENST00000378307 SPARTQ8N0X7 666 aa12.24□□□□□ -0.45
RAB4B-202ENST00000378307 C8orf31Q8N9H6 132 aa12.24□□□□□ -0.45
RAB4B-202ENST00000378307 OR51D1Q8NGF3 324 aa12.24□□□□□ -0.45
RAB4B-202ENST00000378307 OR52L2PQ8NGH6 319 aa12.24□□□□□ -0.45
RAB4B-202ENST00000378307 PLGRKTQ9HBL7 147 aa12.24□□□□□ -0.45
RAB4B-202ENST00000378307 BLOC1S6Q9UL45 172 aa12.24□□□□□ -0.45
RAB4B-202ENST00000378307 NOTCH1P46531 2555 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms