RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 IL3RAP26951 378 aa13.46□□□□□ -0.25
HMGN4-201ENST00000377575 HTR2CP28335 458 aa13.46□□□□□ -0.25
HMGN4-201ENST00000377575 TBCEQ15813 527 aaPredicted RBP13.46□□□□□ -0.25
HMGN4-201ENST00000377575 Q3ZCU0 254 aa13.46□□□□□ -0.25
HMGN4-201ENST00000377575 C1orf100Q5SVJ3 147 aa13.46□□□□□ -0.25
HMGN4-201ENST00000377575 GAPTQ8N292 157 aa13.46□□□□□ -0.25
HMGN4-201ENST00000377575 C11orf44Q8N8P7 122 aa13.46□□□□□ -0.25
HMGN4-201ENST00000377575 C8orf31Q8N9H6 132 aa13.46□□□□□ -0.25
HMGN4-201ENST00000377575 OR6M1Q8NGM8 313 aa13.46□□□□□ -0.25
HMGN4-201ENST00000377575 TMEM59Q9BXS4 323 aa13.46□□□□□ -0.25
HMGN4-201ENST00000377575 KRTAP3-3Q9BYR6 98 aa13.46□□□□□ -0.25
HMGN4-201ENST00000377575 KRTAP3-2Q9BYR7 98 aa13.46□□□□□ -0.25
HMGN4-201ENST00000377575 GFOD1Q9NXC2 390 aa13.46□□□□□ -0.25
HMGN4-201ENST00000377575 A0A1W2PPI3 338 aa13.45□□□□□ -0.26
HMGN4-201ENST00000377575 C12orf77C9JDV5 145 aa13.45□□□□□ -0.26
HMGN4-201ENST00000377575 HSD17B6O14756 317 aa13.45□□□□□ -0.26
HMGN4-201ENST00000377575 SLC22A1O15245 554 aa13.45□□□□□ -0.26
HMGN4-201ENST00000377575 VSIG8P0DPA2 414 aa13.45□□□□□ -0.26
HMGN4-201ENST00000377575 VHLP40337 213 aa13.45□□□□□ -0.26
HMGN4-201ENST00000377575 RPS25P62851 125 aaKnown RBP13.45□□□□□ -0.26
HMGN4-201ENST00000377575 NKAPLQ5M9Q1 402 aa13.45□□□□□ -0.26
HMGN4-201ENST00000377575 SIGIRRQ6IA17 410 aa13.45□□□□□ -0.26
HMGN4-201ENST00000377575 ZNF367Q7RTV3 350 aa13.45□□□□□ -0.26
HMGN4-201ENST00000377575 THNSL2Q86YJ6 484 aa13.45□□□□□ -0.26
HMGN4-201ENST00000377575 LINC00311Q8N616 119 aa13.45□□□□□ -0.26
HMGN4-201ENST00000377575 OR4K15Q8NH41 348 aa13.45□□□□□ -0.26
HMGN4-201ENST00000377575 OR56B4Q8NH76 319 aa13.45□□□□□ -0.26
HMGN4-201ENST00000377575 KCNG3Q8TAE7 436 aa13.45□□□□□ -0.26
HMGN4-201ENST00000377575 UBALD1Q8TB05 177 aa13.45□□□□□ -0.26
HMGN4-201ENST00000377575 NEDD4LQ96PU5 975 aa13.45□□□□□ -0.26
HMGN4-201ENST00000377575 MGLLQ99685 303 aa13.45□□□□□ -0.26
HMGN4-201ENST00000377575 GNG12Q9UBI6 72 aa13.45□□□□□ -0.26
HMGN4-201ENST00000377575 MOB4Q9Y3A3 225 aa13.45□□□□□ -0.26
HMGN4-201ENST00000377575 IGHV3-43A0A0B4J1X8 118 aa13.44□□□□□ -0.26
HMGN4-201ENST00000377575 A0A1W2PPE3 182 aa13.44□□□□□ -0.26
HMGN4-201ENST00000377575 UBE2QL1A1L167 161 aa13.44□□□□□ -0.26
HMGN4-201ENST00000377575 BPNT1O95861 308 aa13.44□□□□□ -0.26
HMGN4-201ENST00000377575 SNRNP70P08621 437 aaKnown RBP13.44□□□□□ -0.26
HMGN4-201ENST00000377575 IGHV3-43DP0DP04 118 aa13.44□□□□□ -0.26
HMGN4-201ENST00000377575 RANBP1P43487 201 aa13.44□□□□□ -0.26
HMGN4-201ENST00000377575 MAP2K4P45985 399 aa13.44□□□□□ -0.26
HMGN4-201ENST00000377575 LOXL3P58215 753 aa13.44□□□□□ -0.26
HMGN4-201ENST00000377575 RPS27AP62979 156 aaKnown RBP13.44□□□□□ -0.26
HMGN4-201ENST00000377575 ZNF816Q0VGE8 651 aaPredicted RBP13.44□□□□□ -0.26
HMGN4-201ENST00000377575 HES1Q14469 280 aa13.44□□□□□ -0.26
HMGN4-201ENST00000377575 TMEM95Q3KNT9 176 aa13.44□□□□□ -0.26
HMGN4-201ENST00000377575 ABCA11PQ4W5N1 156 aa13.44□□□□□ -0.26
HMGN4-201ENST00000377575 TMEM91Q6ZNR0 172 aa13.44□□□□□ -0.26
HMGN4-201ENST00000377575 Q6ZS46 218 aa13.44□□□□□ -0.26
HMGN4-201ENST00000377575 ZNF554Q86TJ5 538 aa13.44□□□□□ -0.26
HMGN4-201ENST00000377575 PRR18Q8N4B5 295 aa13.44□□□□□ -0.26
HMGN4-201ENST00000377575 DRAM1Q8N682 238 aa13.44□□□□□ -0.26
HMGN4-201ENST00000377575 FAM110DQ8TAY7 271 aaPredicted RBP13.44□□□□□ -0.26
HMGN4-201ENST00000377575 OCSTAMPQ9BR26 566 aa13.44□□□□□ -0.26
HMGN4-201ENST00000377575 WNT10AQ9GZT5 417 aa13.44□□□□□ -0.26
HMGN4-201ENST00000377575 PLGRKTQ9HBL7 147 aa13.44□□□□□ -0.26
HMGN4-201ENST00000377575 KCNIP1Q9NZI2 227 aa13.44□□□□□ -0.26
HMGN4-201ENST00000377575 FAM90A9PA6NNJ1 464 aa13.43□□□□□ -0.26
HMGN4-201ENST00000377575 CCRL2O00421 344 aa13.43□□□□□ -0.26
HMGN4-201ENST00000377575 HBZP02008 142 aa13.43□□□□□ -0.26
HMGN4-201ENST00000377575 GAPDHP04406 335 aaKnown RBP13.43□□□□□ -0.26
HMGN4-201ENST00000377575 LPLP06858 475 aa13.43□□□□□ -0.26
HMGN4-201ENST00000377575 GABARAPL2P60520 117 aa13.43□□□□□ -0.26
HMGN4-201ENST00000377575 OR10K2Q6IF99 312 aa13.43□□□□□ -0.26
HMGN4-201ENST00000377575 TM2D1Q9BX74 207 aa13.43□□□□□ -0.26
HMGN4-201ENST00000377575 Q9H521 79 aa13.43□□□□□ -0.26
HMGN4-201ENST00000377575 ACOT13Q9NPJ3 140 aa13.43□□□□□ -0.26
HMGN4-201ENST00000377575 MBNL3Q9NUK0 354 aaKnown RBP13.43□□□□□ -0.26
HMGN4-201ENST00000377575 SLC17A2O00624 439 aa13.42□□□□□ -0.26
HMGN4-201ENST00000377575 CD28P10747 220 aa13.42□□□□□ -0.26
HMGN4-201ENST00000377575 CD37P11049 281 aa13.42□□□□□ -0.26
HMGN4-201ENST00000377575 TMEM11P17152 192 aa13.42□□□□□ -0.26
HMGN4-201ENST00000377575 RCC1P18754 421 aaPredicted RBP13.42□□□□□ -0.26
HMGN4-201ENST00000377575 CALRP27797 417 aaKnown RBP13.42□□□□□ -0.26
HMGN4-201ENST00000377575 CHATP28329 748 aa13.42□□□□□ -0.26
HMGN4-201ENST00000377575 UNC119Q13432 240 aa13.42□□□□□ -0.26
HMGN4-201ENST00000377575 DIAPH2-AS1Q14236 149 aa13.42□□□□□ -0.26
HMGN4-201ENST00000377575 FBLN7Q53RD9 439 aa13.42□□□□□ -0.26
HMGN4-201ENST00000377575 MRPL30Q8TCC3 161 aaKnown RBP13.42□□□□□ -0.26
HMGN4-201ENST00000377575 WIPF2Q8TF74 440 aaPredicted RBP13.42□□□□□ -0.26
HMGN4-201ENST00000377575 URM1Q9BTM9 101 aaKnown RBP13.42□□□□□ -0.26
HMGN4-201ENST00000377575 TAF9BQ9HBM6 251 aa13.42□□□□□ -0.26
HMGN4-201ENST00000377575 IGHV1-3A0A0C4DH29 117 aa13.41□□□□□ -0.26
HMGN4-201ENST00000377575 TMEM14DPA8MWL7 114 aa13.41□□□□□ -0.26
HMGN4-201ENST00000377575 TXNL1O43396 289 aa13.41□□□□□ -0.26
HMGN4-201ENST00000377575 MRPS14O60783 128 aaKnown RBP13.41□□□□□ -0.26
HMGN4-201ENST00000377575 IGKV1D-33P01593 117 aa13.41□□□□□ -0.26
HMGN4-201ENST00000377575 IGKV1-33P01594 117 aa13.41□□□□□ -0.26
HMGN4-201ENST00000377575 ARSBP15848 533 aa13.41□□□□□ -0.26
HMGN4-201ENST00000377575 FABP5Q01469 135 aa13.41□□□□□ -0.26
HMGN4-201ENST00000377575 RAB11BQ15907 218 aa13.41□□□□□ -0.26
HMGN4-201ENST00000377575 SLC25A48Q6ZT89 311 aaKnown RBP13.41□□□□□ -0.26
HMGN4-201ENST00000377575 OR2W3Q7Z3T1 314 aa13.41□□□□□ -0.26
HMGN4-201ENST00000377575 MOB3BQ86TA1 216 aa13.41□□□□□ -0.26
HMGN4-201ENST00000377575 NDUFA11Q86Y39 141 aa13.41□□□□□ -0.26
HMGN4-201ENST00000377575 OR10V1Q8NGI7 309 aa13.41□□□□□ -0.26
HMGN4-201ENST00000377575 OR1L1Q8NH94 360 aa13.41□□□□□ -0.26
HMGN4-201ENST00000377575 SULT4A1Q9BR01 284 aa13.41□□□□□ -0.26
HMGN4-201ENST00000377575 KCNK15Q9H427 330 aa13.41□□□□□ -0.26
HMGN4-201ENST00000377575 AK6Q9Y3D8 172 aaKnown RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms