RNA–Protein interactions for RNA: ENST00000376659.9

TRIM39-202, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM39, Length 3,535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-202ENST00000376659 IGKV1-5P01602 117 aa8.11□□□□□ -1.11
TRIM39-202ENST00000376659 MBP02144 154 aa8.11□□□□□ -1.11
TRIM39-202ENST00000376659 JMJD7P0C870 316 aa8.11□□□□□ -1.11
TRIM39-202ENST00000376659 WT1P19544 449 aaPredicted RBP8.11□□□□□ -1.11
TRIM39-202ENST00000376659 OR2B11Q5JQS5 317 aa8.11□□□□□ -1.11
TRIM39-202ENST00000376659 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.11□□□□□ -1.11
TRIM39-202ENST00000376659 MKXQ8IYA7 352 aa8.11□□□□□ -1.11
TRIM39-202ENST00000376659 C17orf78Q8N4C9 275 aa8.11□□□□□ -1.11
TRIM39-202ENST00000376659 COMMD1Q8N668 190 aa8.11□□□□□ -1.11
TRIM39-202ENST00000376659 RNASE11Q8TAA1 199 aaKnown RBP8.11□□□□□ -1.11
TRIM39-202ENST00000376659 KIRREL1Q96J84 757 aa8.11□□□□□ -1.11
TRIM39-202ENST00000376659 PARP12Q9H0J9 701 aaKnown RBP8.11□□□□□ -1.11
TRIM39-202ENST00000376659 OR2S2Q9NQN1 319 aa8.11□□□□□ -1.11
TRIM39-202ENST00000376659 OR1A1Q9P1Q5 309 aa8.11□□□□□ -1.11
TRIM39-202ENST00000376659 KLF13Q9Y2Y9 288 aaPredicted RBP8.11□□□□□ -1.11
TRIM39-202ENST00000376659 IGKV3-15P01624 115 aa8.11□□□□□ -1.11
TRIM39-202ENST00000376659 PVALBP20472 110 aaPredicted RBP8.11□□□□□ -1.11
TRIM39-202ENST00000376659 SRPXP78539 464 aa8.11□□□□□ -1.11
TRIM39-202ENST00000376659 MIDNQ504T8 468 aa8.11□□□□□ -1.11
TRIM39-202ENST00000376659 LINC00696Q6ZRV3 163 aa8.11□□□□□ -1.11
TRIM39-202ENST00000376659 CCDC71LQ8N9Z2 235 aa8.11□□□□□ -1.11
TRIM39-202ENST00000376659 RXFP4Q8TDU9 374 aa8.11□□□□□ -1.11
TRIM39-202ENST00000376659 ABHD14AQ9BUJ0 271 aa8.11□□□□□ -1.11
TRIM39-202ENST00000376659 PLK3Q9H4B4 646 aa8.11□□□□□ -1.11
TRIM39-202ENST00000376659 ASCL3Q9NQ33 180 aa8.11□□□□□ -1.11
TRIM39-202ENST00000376659 FAM186AA6NE01 2351 aa8.1□□□□□ -1.11
TRIM39-202ENST00000376659 J3QT63 122 aa8.1□□□□□ -1.11
TRIM39-202ENST00000376659 TCAPO15273 167 aa8.1□□□□□ -1.11
TRIM39-202ENST00000376659 MLNRO43193 412 aa8.1□□□□□ -1.11
TRIM39-202ENST00000376659 IFNA21P01568 189 aa8.1□□□□□ -1.11
TRIM39-202ENST00000376659 EIF2S3P41091 472 aaKnown RBP8.1□□□□□ -1.11
TRIM39-202ENST00000376659 TNFSF10P50591 281 aa8.1□□□□□ -1.11
TRIM39-202ENST00000376659 ERVS71-1P61550 626 aa8.1□□□□□ -1.11
TRIM39-202ENST00000376659 SNRPEP62304 92 aaKnown RBP8.1□□□□□ -1.11
TRIM39-202ENST00000376659 BLOC1S1P78537 153 aa8.1□□□□□ -1.11
TRIM39-202ENST00000376659 HABP2Q14520 560 aaPredicted RBP8.1□□□□□ -1.11
TRIM39-202ENST00000376659 ALKBH6Q3KRA9 238 aa8.1□□□□□ -1.11
TRIM39-202ENST00000376659 C16orf54Q6UWD8 224 aa8.1□□□□□ -1.11
TRIM39-202ENST00000376659 MEGF10Q96KG7 1140 aa8.1□□□□□ -1.11
TRIM39-202ENST00000376659 SMIM3Q9BZL3 60 aa8.1□□□□□ -1.11
TRIM39-202ENST00000376659 KCNIP3Q9Y2W7 256 aa8.1□□□□□ -1.11
TRIM39-202ENST00000376659 LRP5LA4QPB2 252 aa8.1□□□□□ -1.11
TRIM39-202ENST00000376659 ST8SIA3O43173 380 aa8.1□□□□□ -1.11
TRIM39-202ENST00000376659 ADAM20O43506 726 aa8.1□□□□□ -1.11
TRIM39-202ENST00000376659 S100A8P05109 93 aa8.1□□□□□ -1.11
TRIM39-202ENST00000376659 GLI4P10075 376 aa8.1□□□□□ -1.11
TRIM39-202ENST00000376659 PPP1CCP36873 323 aaKnown RBP8.1□□□□□ -1.11
TRIM39-202ENST00000376659 CCL20P78556 96 aa8.1□□□□□ -1.11
TRIM39-202ENST00000376659 SRSF6Q13247 344 aaKnown RBP8.1□□□□□ -1.11
TRIM39-202ENST00000376659 MRPL21Q7Z2W9 205 aaKnown RBP8.1□□□□□ -1.11
TRIM39-202ENST00000376659 FOXRED2Q8IWF2 684 aa8.1□□□□□ -1.11
TRIM39-202ENST00000376659 OR2C3Q8N628 320 aa8.1□□□□□ -1.11
TRIM39-202ENST00000376659 WDR31Q8NA23 367 aa8.1□□□□□ -1.11
TRIM39-202ENST00000376659 IP6K3Q96PC2 410 aa8.1□□□□□ -1.11
TRIM39-202ENST00000376659 ZNF442Q9H7R0 627 aa8.1□□□□□ -1.11
TRIM39-202ENST00000376659 C19orf12Q9NSK7 152 aa8.1□□□□□ -1.11
TRIM39-202ENST00000376659 TANC2Q9HCD6 1990 aa8.1□□□□□ -1.11
TRIM39-202ENST00000376659 DEGS1O15121 323 aa8.09□□□□□ -1.11
TRIM39-202ENST00000376659 SLC31A2O15432 143 aa8.09□□□□□ -1.11
TRIM39-202ENST00000376659 SYNGR4O95473 234 aa8.09□□□□□ -1.11
TRIM39-202ENST00000376659 SPINK2P20155 84 aa8.09□□□□□ -1.11
TRIM39-202ENST00000376659 GNG10P50151 68 aa8.09□□□□□ -1.11
TRIM39-202ENST00000376659 AARDQ4LEZ3 155 aa8.09□□□□□ -1.11
TRIM39-202ENST00000376659 ABCA11PQ4W5N1 156 aa8.09□□□□□ -1.11
TRIM39-202ENST00000376659 HAGHLQ6PII5 290 aaPredicted RBP8.09□□□□□ -1.11
TRIM39-202ENST00000376659 SUMF1Q8NBK3 374 aa8.09□□□□□ -1.11
TRIM39-202ENST00000376659 SCCPDHQ8NBX0 429 aa8.09□□□□□ -1.11
TRIM39-202ENST00000376659 SECTM1Q8WVN6 248 aa8.09□□□□□ -1.11
TRIM39-202ENST00000376659 OR2W1Q9Y3N9 320 aa8.09□□□□□ -1.11
TRIM39-202ENST00000376659 CGAP01215 116 aa8.09□□□□□ -1.11
TRIM39-202ENST00000376659 FBP1P09467 338 aa8.09□□□□□ -1.11
TRIM39-202ENST00000376659 F2RP25116 425 aa8.09□□□□□ -1.11
TRIM39-202ENST00000376659 GNG3P63215 75 aa8.09□□□□□ -1.11
TRIM39-202ENST00000376659 EIF5AP63241 154 aaKnown RBP8.09□□□□□ -1.11
TRIM39-202ENST00000376659 GABRA6Q16445 453 aa8.09□□□□□ -1.11
TRIM39-202ENST00000376659 EIF2S3LQ2VIR3 472 aaKnown RBP8.09□□□□□ -1.11
TRIM39-202ENST00000376659 IGF2-ASQ6U949 168 aa8.09□□□□□ -1.11
TRIM39-202ENST00000376659 FAM58AQ8N1B3 248 aa8.09□□□□□ -1.11
TRIM39-202ENST00000376659 TMEM252Q8N6L7 170 aa8.09□□□□□ -1.11
TRIM39-202ENST00000376659 GMPPAQ96IJ6 420 aaPredicted RBP8.09□□□□□ -1.11
TRIM39-202ENST00000376659 PARD6GQ9BYG4 376 aaPredicted RBP8.09□□□□□ -1.11
TRIM39-202ENST00000376659 TUBA4BQ9H853 241 aa8.09□□□□□ -1.11
TRIM39-202ENST00000376659 ZFP57Q9NU63 452 aa8.09□□□□□ -1.11
TRIM39-202ENST00000376659 FAM24AA6NFZ4 105 aa8.09□□□□□ -1.11
TRIM39-202ENST00000376659 IGLV1-44P01699 117 aa8.09□□□□□ -1.11
TRIM39-202ENST00000376659 MDKP21741 143 aaPredicted RBP8.09□□□□□ -1.11
TRIM39-202ENST00000376659 CLN3Q13286 438 aa8.09□□□□□ -1.11
TRIM39-202ENST00000376659 DHRS13Q6UX07 377 aa8.09□□□□□ -1.11
TRIM39-202ENST00000376659 SSX7Q7RTT5 188 aa8.09□□□□□ -1.11
TRIM39-202ENST00000376659 RIMS4Q9H426 269 aaPredicted RBP8.09□□□□□ -1.11
TRIM39-202ENST00000376659 FAM86C1Q9NVL1 165 aa8.09□□□□□ -1.11
TRIM39-202ENST00000376659 STRAPQ9Y3F4 350 aaKnown RBP8.09□□□□□ -1.11
TRIM39-202ENST00000376659 KIR2DS1A0A191URI9 304 aa8.08□□□□□ -1.12
TRIM39-202ENST00000376659 TNFSF15O95150 251 aa8.08□□□□□ -1.12
TRIM39-202ENST00000376659 OR2H2O95918 312 aa8.08□□□□□ -1.12
TRIM39-202ENST00000376659 SCGB1D2O95969 90 aa8.08□□□□□ -1.12
TRIM39-202ENST00000376659 VDAC1P21796 283 aa8.08□□□□□ -1.12
TRIM39-202ENST00000376659 ITGA3P26006 1051 aa8.08□□□□□ -1.12
TRIM39-202ENST00000376659 KIR2DS4P43632 304 aa8.08□□□□□ -1.12
TRIM39-202ENST00000376659 RAB5CP51148 216 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms