RNA–Protein interactions for RNA: ENST00000376061.8

PDPN-203, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-203ENST00000376061 CR1LQ2VPA4 569 aa8.66□□□□□ -1.02
PDPN-203ENST00000376061 LRRC10Q5BKY1 277 aa8.66□□□□□ -1.02
PDPN-203ENST00000376061 AADACL3Q5VUY0 350 aa8.66□□□□□ -1.02
PDPN-203ENST00000376061 HIST2H2BCQ6DN03 193 aa8.66□□□□□ -1.02
PDPN-203ENST00000376061 ZNF554Q86TJ5 538 aa8.66□□□□□ -1.02
PDPN-203ENST00000376061 TMEM17Q86X19 198 aa8.66□□□□□ -1.02
PDPN-203ENST00000376061 PRR18Q8N4B5 295 aa8.66□□□□□ -1.02
PDPN-203ENST00000376061 SPICQ8N5J4 248 aa8.66□□□□□ -1.02
PDPN-203ENST00000376061 OR1L1Q8NH94 360 aa8.66□□□□□ -1.02
PDPN-203ENST00000376061 LURAP1Q96LR2 239 aa8.66□□□□□ -1.02
PDPN-203ENST00000376061 SLC25A21Q9BQT8 299 aaPredicted RBP8.66□□□□□ -1.02
PDPN-203ENST00000376061 ZNF2Q9BSG1 426 aaPredicted RBP8.66□□□□□ -1.02
PDPN-203ENST00000376061 FXYD6Q9H0Q3 95 aa8.66□□□□□ -1.02
PDPN-203ENST00000376061 C19orf12Q9NSK7 152 aa8.66□□□□□ -1.02
PDPN-203ENST00000376061 KCNIP1Q9NZI2 227 aa8.66□□□□□ -1.02
PDPN-203ENST00000376061 OR6C3Q9NZP0 311 aa8.66□□□□□ -1.02
PDPN-203ENST00000376061 DOCK11Q5JSL3 2073 aa8.66□□□□□ -1.02
PDPN-203ENST00000376061 ARID1AO14497 2285 aa8.65□□□□□ -1.02
PDPN-203ENST00000376061 TRBV6-7A0A0A0MS04 114 aa8.65□□□□□ -1.02
PDPN-203ENST00000376061 OR5H14A6NHG9 310 aa8.65□□□□□ -1.02
PDPN-203ENST00000376061 F5H0A9 414 aaPredicted RBP8.65□□□□□ -1.02
PDPN-203ENST00000376061 INMT-MINDY4F8WBC2 141 aa8.65□□□□□ -1.02
PDPN-203ENST00000376061 TUSC2O75896 110 aa8.65□□□□□ -1.02
PDPN-203ENST00000376061 DIRAS3O95661 229 aa8.65□□□□□ -1.02
PDPN-203ENST00000376061 SCGB1D2O95969 90 aa8.65□□□□□ -1.02
PDPN-203ENST00000376061 HBZP02008 142 aa8.65□□□□□ -1.02
PDPN-203ENST00000376061 CTXN2P0C2S0 81 aa8.65□□□□□ -1.02
PDPN-203ENST00000376061 H2AFB2P0C5Z0 115 aa8.65□□□□□ -1.02
PDPN-203ENST00000376061 PAX1P15863 534 aa8.65□□□□□ -1.02
PDPN-203ENST00000376061 AADACP22760 399 aa8.65□□□□□ -1.02
PDPN-203ENST00000376061 NFYAP23511 347 aaPredicted RBP8.65□□□□□ -1.02
PDPN-203ENST00000376061 FCGR2CP31995 323 aa8.65□□□□□ -1.02
PDPN-203ENST00000376061 NPY4RP50391 375 aa8.65□□□□□ -1.02
PDPN-203ENST00000376061 ATP5J2P56134 94 aa8.65□□□□□ -1.02
PDPN-203ENST00000376061 DHRS11Q6UWP2 260 aa8.65□□□□□ -1.02
PDPN-203ENST00000376061 ZNF841Q6ZN19 808 aa8.65□□□□□ -1.02
PDPN-203ENST00000376061 OR8B3Q8NGG8 313 aa8.65□□□□□ -1.02
PDPN-203ENST00000376061 OR6F1Q8NGZ6 308 aa8.65□□□□□ -1.02
PDPN-203ENST00000376061 TERB2Q8NHR7 220 aa8.65□□□□□ -1.02
PDPN-203ENST00000376061 MARCH1Q8TCQ1 289 aa8.65□□□□□ -1.02
PDPN-203ENST00000376061 IL1F10Q8WWZ1 152 aa8.65□□□□□ -1.02
PDPN-203ENST00000376061 H1FXQ92522 213 aaKnown RBP8.65□□□□□ -1.02
PDPN-203ENST00000376061 NEIL1Q96FI4 390 aaPredicted RBP8.65□□□□□ -1.02
PDPN-203ENST00000376061 OR8B2Q96RD0 313 aa8.65□□□□□ -1.02
PDPN-203ENST00000376061 TMPRSS13Q9BYE2 586 aa8.65□□□□□ -1.02
PDPN-203ENST00000376061 BARX1Q9HBU1 254 aaPredicted RBP8.65□□□□□ -1.02
PDPN-203ENST00000376061 OR1A1Q9P1Q5 309 aa8.65□□□□□ -1.02
PDPN-203ENST00000376061 MIOXQ9UGB7 285 aa8.65□□□□□ -1.02
PDPN-203ENST00000376061 PCDHB10Q9UN67 800 aa8.65□□□□□ -1.02
PDPN-203ENST00000376061 VSIG4Q9Y279 399 aa8.65□□□□□ -1.02
PDPN-203ENST00000376061 POLQO75417 2590 aa8.65□□□□□ -1.03
PDPN-203ENST00000376061 TRGV10A0A0A0MS01 117 aa8.64□□□□□ -1.03
PDPN-203ENST00000376061 hADV38S2A0JD32 116 aa8.64□□□□□ -1.03
PDPN-203ENST00000376061 SPINT2O43291 252 aa8.64□□□□□ -1.03
PDPN-203ENST00000376061 PPYP01298 95 aa8.64□□□□□ -1.03
PDPN-203ENST00000376061 CGB3P0DN86 165 aa8.64□□□□□ -1.03
PDPN-203ENST00000376061 CGB7P0DN87 165 aa8.64□□□□□ -1.03
PDPN-203ENST00000376061 ANXA7P20073 488 aaKnown RBP8.64□□□□□ -1.03
PDPN-203ENST00000376061 FPR2P25090 351 aa8.64□□□□□ -1.03
PDPN-203ENST00000376061 IL2RGP31785 369 aa8.64□□□□□ -1.03
PDPN-203ENST00000376061 PDLIM4P50479 330 aa8.64□□□□□ -1.03
PDPN-203ENST00000376061 MECP2P51608 486 aaKnown RBP8.64□□□□□ -1.03
PDPN-203ENST00000376061 RAG2P55895 527 aa8.64□□□□□ -1.03
PDPN-203ENST00000376061 HERV-K104P61576 105 aa8.64□□□□□ -1.03
PDPN-203ENST00000376061 RPL31P62899 125 aaKnown RBP8.64□□□□□ -1.03
PDPN-203ENST00000376061 MEF2CQ06413 473 aaPredicted RBP8.64□□□□□ -1.03
PDPN-203ENST00000376061 ZNF273Q14593 569 aa8.64□□□□□ -1.03
PDPN-203ENST00000376061 GNMTQ14749 295 aa8.64□□□□□ -1.03
PDPN-203ENST00000376061 TATDN3Q17R31 274 aa8.64□□□□□ -1.03
PDPN-203ENST00000376061 C17orf58Q2M2W7 97 aa8.64□□□□□ -1.03
PDPN-203ENST00000376061 NLRC3Q7RTR2 1065 aa8.64□□□□□ -1.03
PDPN-203ENST00000376061 H1FOOQ8IZA3 346 aaPredicted RBP8.64□□□□□ -1.03
PDPN-203ENST00000376061 ZDHHC22Q8N966 263 aa8.64□□□□□ -1.03
PDPN-203ENST00000376061 ZNF565Q8N9K5 539 aa8.64□□□□□ -1.03
PDPN-203ENST00000376061 OR10J5Q8NHC4 309 aa8.64□□□□□ -1.03
PDPN-203ENST00000376061 GIMAP1Q8WWP7 306 aa8.64□□□□□ -1.03
PDPN-203ENST00000376061 CORO2AQ92828 525 aa8.64□□□□□ -1.03
PDPN-203ENST00000376061 ARL11Q969Q4 196 aa8.64□□□□□ -1.03
PDPN-203ENST00000376061 MOB3AQ96BX8 217 aa8.64□□□□□ -1.03
PDPN-203ENST00000376061 PERPQ96FX8 193 aa8.64□□□□□ -1.03
PDPN-203ENST00000376061 GSX2Q9BZM3 304 aa8.64□□□□□ -1.03
PDPN-203ENST00000376061 BPESC1Q9GZL8 116 aa8.64□□□□□ -1.03
PDPN-203ENST00000376061 NARFLQ9H6Q4 476 aa8.64□□□□□ -1.03
PDPN-203ENST00000376061 CALYQ9NYX4 217 aa8.64□□□□□ -1.03
PDPN-203ENST00000376061 LPAR3Q9UBY5 353 aa8.64□□□□□ -1.03
PDPN-203ENST00000376061 ZNF69Q9UC07 566 aa8.64□□□□□ -1.03
PDPN-203ENST00000376061 SLC23A1Q9UHI7 598 aa8.64□□□□□ -1.03
PDPN-203ENST00000376061 OPN4Q9UHM6 478 aa8.64□□□□□ -1.03
PDPN-203ENST00000376061 LINC00312Q9Y6C7 94 aa8.64□□□□□ -1.03
PDPN-203ENST00000376061 APCP25054 2843 aa8.64□□□□□ -1.03
PDPN-203ENST00000376061 FASNP49327 2511 aaKnown RBP8.63□□□□□ -1.03
PDPN-203ENST00000376061 TRBV23-1A0A0A0MS06 115 aa8.63□□□□□ -1.03
PDPN-203ENST00000376061 ZNF729A6NN14 1252 aaPredicted RBP8.63□□□□□ -1.03
PDPN-203ENST00000376061 F2RL2O00254 374 aa8.63□□□□□ -1.03
PDPN-203ENST00000376061 RLN1P04808 185 aa8.63□□□□□ -1.03
PDPN-203ENST00000376061 WNT2P09544 360 aa8.63□□□□□ -1.03
PDPN-203ENST00000376061 VSIG10L2P0DP72 767 aa8.63□□□□□ -1.03
PDPN-203ENST00000376061 GZMHP20718 246 aa8.63□□□□□ -1.03
PDPN-203ENST00000376061 FXYD4P59646 89 aa8.63□□□□□ -1.03
PDPN-203ENST00000376061 BAMBIQ13145 260 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms