RNA–Protein interactions for RNA: ENST00000375023.3

NOTCH4-201, Transcript of notch 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH4, Length 6,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4-201ENST00000375023 NPAS1Q99742 590 aa12.85□□□□□ -0.35
NOTCH4-201ENST00000375023 SELENOKQ9Y6D0 94 aa12.85□□□□□ -0.35
NOTCH4-201ENST00000375023 DLK1P80370 383 aa12.85□□□□□ -0.35
NOTCH4-201ENST00000375023 OR51B2Q9Y5P1 312 aa12.85□□□□□ -0.35
NOTCH4-201ENST00000375023 RP1L1Q8IWN7 2480 aaPredicted RBP12.85□□□□□ -0.35
NOTCH4-201ENST00000375023 UPK3AO75631 287 aa12.85□□□□□ -0.35
NOTCH4-201ENST00000375023 F12P00748 615 aaPredicted RBP12.85□□□□□ -0.35
NOTCH4-201ENST00000375023 REG1AP05451 166 aa12.85□□□□□ -0.35
NOTCH4-201ENST00000375023 SRSF9Q13242 221 aaKnown RBP eCLIP12.85□□□□□ -0.35
NOTCH4-201ENST00000375023 DCAF10Q5QP82 559 aa12.85□□□□□ -0.35
NOTCH4-201ENST00000375023 CBLN2Q8IUK8 224 aa12.85□□□□□ -0.35
NOTCH4-201ENST00000375023 OR1L1Q8NH94 360 aa12.85□□□□□ -0.35
NOTCH4-201ENST00000375023 CACNA1GO43497 2377 aa12.85□□□□□ -0.35
NOTCH4-201ENST00000375023 TDRD6O60522 2096 aaKnown RBP12.84□□□□□ -0.35
NOTCH4-201ENST00000375023 GP1BAP07359 652 aa12.84□□□□□ -0.35
NOTCH4-201ENST00000375023 IL13RA2Q14627 380 aa12.84□□□□□ -0.35
NOTCH4-201ENST00000375023 SCMH1Q96GD3 660 aa12.84□□□□□ -0.35
NOTCH4-201ENST00000375023 ZNF253O75346 499 aa12.84□□□□□ -0.35
NOTCH4-201ENST00000375023 KLRB1Q12918 225 aa12.84□□□□□ -0.35
NOTCH4-201ENST00000375023 JMJD6Q6NYC1 403 aaPredicted RBP12.84□□□□□ -0.35
NOTCH4-201ENST00000375023 OR4B1Q8NGF8 309 aa12.84□□□□□ -0.35
NOTCH4-201ENST00000375023 TBX15Q96SF7 602 aa12.84□□□□□ -0.35
NOTCH4-201ENST00000375023 KLHDC2Q9Y2U9 406 aa12.84□□□□□ -0.35
NOTCH4-201ENST00000375023 MPC1Q9Y5U8 109 aa12.84□□□□□ -0.35
NOTCH4-201ENST00000375023 PPYP01298 95 aa12.84□□□□□ -0.35
NOTCH4-201ENST00000375023 IGHV3-48P01763 117 aa12.84□□□□□ -0.35
NOTCH4-201ENST00000375023 PRSS54Q6PEW0 395 aa12.84□□□□□ -0.35
NOTCH4-201ENST00000375023 ADAMTSL1Q8N6G6 1762 aa12.84□□□□□ -0.35
NOTCH4-201ENST00000375023 TMEM255AQ5JRV8 349 aa12.84□□□□□ -0.35
NOTCH4-201ENST00000375023 SPANXN1Q5VSR9 72 aa12.84□□□□□ -0.35
NOTCH4-201ENST00000375023 WDR74Q6RFH5 385 aaPredicted RBP12.84□□□□□ -0.35
NOTCH4-201ENST00000375023 TJP1Q07157 1748 aa12.84□□□□□ -0.35
NOTCH4-201ENST00000375023 TMEM183BQ1AE95 376 aa12.84□□□□□ -0.35
NOTCH4-201ENST00000375023 AWAT1Q58HT5 328 aa12.84□□□□□ -0.35
NOTCH4-201ENST00000375023 SLC25A53Q5H9E4 307 aa12.84□□□□□ -0.35
NOTCH4-201ENST00000375023 LPAR3Q9UBY5 353 aa12.84□□□□□ -0.35
NOTCH4-201ENST00000375023 ZNF831Q5JPB2 1677 aa12.84□□□□□ -0.35
NOTCH4-201ENST00000375023 CD160O95971 181 aa12.84□□□□□ -0.35
NOTCH4-201ENST00000375023 CYB5R3P00387 301 aaPredicted RBP12.84□□□□□ -0.35
NOTCH4-201ENST00000375023 AREGP15514 252 aa12.84□□□□□ -0.35
NOTCH4-201ENST00000375023 HLA-DRB3P79483 266 aa12.84□□□□□ -0.35
NOTCH4-201ENST00000375023 PCOLCEQ15113 449 aa12.84□□□□□ -0.35
NOTCH4-201ENST00000375023 PTX4Q96A99 478 aa12.84□□□□□ -0.35
NOTCH4-201ENST00000375023 CACFD1Q9UGQ2 172 aa12.84□□□□□ -0.35
NOTCH4-201ENST00000375023 PRSS50Q9UI38 385 aa12.84□□□□□ -0.35
NOTCH4-201ENST00000375023 H3BTX0 84 aa12.83□□□□□ -0.36
NOTCH4-201ENST00000375023 BTF3P20290 206 aaKnown RBP12.83□□□□□ -0.36
NOTCH4-201ENST00000375023 RNF212Q495C1 297 aa12.83□□□□□ -0.36
NOTCH4-201ENST00000375023 ZNF426Q9BUY5 554 aa12.83□□□□□ -0.36
NOTCH4-201ENST00000375023 RPL31P62899 125 aaKnown RBP12.83□□□□□ -0.36
NOTCH4-201ENST00000375023 HLA-DRB5Q30154 266 aa12.83□□□□□ -0.36
NOTCH4-201ENST00000375023 DOLPP1Q86YN1 238 aa12.83□□□□□ -0.36
NOTCH4-201ENST00000375023 LRRC3BQ96PB8 259 aa12.83□□□□□ -0.36
NOTCH4-201ENST00000375023 CCDC88CQ9P219 2028 aa12.83□□□□□ -0.36
NOTCH4-201ENST00000375023 CRISP2P16562 243 aa12.83□□□□□ -0.36
NOTCH4-201ENST00000375023 MIA3Q5JRA6 1907 aa12.83□□□□□ -0.36
NOTCH4-201ENST00000375023 IGHV3-35A0A0C4DH35 117 aa12.83□□□□□ -0.36
NOTCH4-201ENST00000375023 M0R3E3 92 aa12.83□□□□□ -0.36
NOTCH4-201ENST00000375023 ADAM11O75078 769 aa12.83□□□□□ -0.36
NOTCH4-201ENST00000375023 DPPA3Q6W0C5 159 aa12.83□□□□□ -0.36
NOTCH4-201ENST00000375023 SSX8Q7RTT4 187 aa12.83□□□□□ -0.36
NOTCH4-201ENST00000375023 HMGCLL1Q8TB92 370 aa12.83□□□□□ -0.36
NOTCH4-201ENST00000375023 HELTA6NFD8 242 aa12.83□□□□□ -0.36
NOTCH4-201ENST00000375023 PRSS42Q7Z5A4 293 aa12.83□□□□□ -0.36
NOTCH4-201ENST00000375023 SGK494Q96LW2 274 aa12.83□□□□□ -0.36
NOTCH4-201ENST00000375023 ELOVL1Q9BW60 279 aa12.83□□□□□ -0.36
NOTCH4-201ENST00000375023 PLAC1Q9HBJ0 212 aa12.83□□□□□ -0.36
NOTCH4-201ENST00000375023 TMEM38BQ9NVV0 291 aa12.83□□□□□ -0.36
NOTCH4-201ENST00000375023 IGKV1D-16P01601 117 aa12.82□□□□□ -0.36
NOTCH4-201ENST00000375023 MMP9P14780 707 aa12.82□□□□□ -0.36
NOTCH4-201ENST00000375023 TMEM50BP56557 158 aa12.82□□□□□ -0.36
NOTCH4-201ENST00000375023 OR10G8Q8NGN5 311 aa12.82□□□□□ -0.36
NOTCH4-201ENST00000375023 ST6GAL2Q96JF0 529 aa12.82□□□□□ -0.36
NOTCH4-201ENST00000375023 KIAA1217Q5T5P2 1943 aa12.82□□□□□ -0.36
NOTCH4-201ENST00000375023 LCN2P80188 198 aa12.82□□□□□ -0.36
NOTCH4-201ENST00000375023 PAPPA2Q9BXP8 1791 aa12.82□□□□□ -0.36
NOTCH4-201ENST00000375023 CST2P09228 141 aa12.82□□□□□ -0.36
NOTCH4-201ENST00000375023 MAP1LC3CQ9BXW4 147 aa12.82□□□□□ -0.36
NOTCH4-201ENST00000375023 RNF122Q9H9V4 155 aa12.82□□□□□ -0.36
NOTCH4-201ENST00000375023 SLC17A5Q9NRA2 495 aa12.82□□□□□ -0.36
NOTCH4-201ENST00000375023 NMUP48645 174 aa12.82□□□□□ -0.36
NOTCH4-201ENST00000375023 IGSF11Q5DX21 431 aa12.82□□□□□ -0.36
NOTCH4-201ENST00000375023 BVESQ8NE79 360 aa12.82□□□□□ -0.36
NOTCH4-201ENST00000375023 ZNF502Q8TBZ5 544 aa12.82□□□□□ -0.36
NOTCH4-201ENST00000375023 A0A1W2PPV9 198 aa12.82□□□□□ -0.36
NOTCH4-201ENST00000375023 J3QR06 171 aa12.82□□□□□ -0.36
NOTCH4-201ENST00000375023 NUBP1P53384 320 aa12.82□□□□□ -0.36
NOTCH4-201ENST00000375023 ANKRD55Q3KP44 614 aa12.82□□□□□ -0.36
NOTCH4-201ENST00000375023 SMRP1Q8NCR6 262 aa12.82□□□□□ -0.36
NOTCH4-201ENST00000375023 OR2V2Q96R30 315 aa12.82□□□□□ -0.36
NOTCH4-201ENST00000375023 PCED1AQ9H1Q7 454 aa12.82□□□□□ -0.36
NOTCH4-201ENST00000375023 BSXQ3C1V8 233 aa12.81□□□□□ -0.36
NOTCH4-201ENST00000375023 TGFAP01135 160 aa12.81□□□□□ -0.36
NOTCH4-201ENST00000375023 IGHV3-23P01764 117 aa12.81□□□□□ -0.36
NOTCH4-201ENST00000375023 EWSR1Q01844 656 aaKnown RBP eCLIP12.81□□□□□ -0.36
NOTCH4-201ENST00000375023 C1orf162Q8NEQ5 155 aaPredicted RBP12.81□□□□□ -0.36
NOTCH4-201ENST00000375023 DIRC2Q96SL1 478 aa12.81□□□□□ -0.36
NOTCH4-201ENST00000375023 RNF24Q9Y225 148 aa12.81□□□□□ -0.36
NOTCH4-201ENST00000375023 A0A0B4J293 547 aa12.81□□□□□ -0.36
NOTCH4-201ENST00000375023 UQCRFS1P47985 274 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms