RNA–Protein interactions for RNA: ENST00000373222.3

CHD6-202, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 2,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-202ENST00000373222 SLC35G3Q8N808 338 aa5.45□□□□□ -1.54
CHD6-202ENST00000373222 HSD17B11Q8NBQ5 300 aa5.45□□□□□ -1.54
CHD6-202ENST00000373222 OCC1Q8TAD7 63 aa5.45□□□□□ -1.54
CHD6-202ENST00000373222 ARL11Q969Q4 196 aa5.45□□□□□ -1.54
CHD6-202ENST00000373222 SPSB1Q96BD6 273 aa5.45□□□□□ -1.54
CHD6-202ENST00000373222 ABHD14AQ9BUJ0 271 aa5.45□□□□□ -1.54
CHD6-202ENST00000373222 SF3B5Q9BWJ5 86 aaKnown RBP5.45□□□□□ -1.54
CHD6-202ENST00000373222 MAGT1Q9H0U3 335 aa5.45□□□□□ -1.54
CHD6-202ENST00000373222 SAV1Q9H4B6 383 aaPredicted RBP5.45□□□□□ -1.54
CHD6-202ENST00000373222 MTCH1Q9NZJ7 389 aa5.45□□□□□ -1.54
CHD6-202ENST00000373222 TIMM10BQ9Y5J6 103 aa5.45□□□□□ -1.54
CHD6-202ENST00000373222 CEP295Q9C0D2 2601 aa5.45□□□□□ -1.54
CHD6-202ENST00000373222 MEX3AA1L020 520 aaKnown RBP5.45□□□□□ -1.54
CHD6-202ENST00000373222 PCP4L1A6NKN8 68 aa5.45□□□□□ -1.54
CHD6-202ENST00000373222 MRPL33O75394 65 aaKnown RBP5.45□□□□□ -1.54
CHD6-202ENST00000373222 SFTA3P0C7M3 94 aa5.45□□□□□ -1.54
CHD6-202ENST00000373222 DAOP14920 347 aa5.45□□□□□ -1.54
CHD6-202ENST00000373222 OMGP23515 440 aa5.45□□□□□ -1.54
CHD6-202ENST00000373222 LHX2P50458 406 aa5.45□□□□□ -1.54
CHD6-202ENST00000373222 CLDN18P56856 261 aa5.45□□□□□ -1.54
CHD6-202ENST00000373222 MZT1Q08AG7 82 aa5.45□□□□□ -1.54
CHD6-202ENST00000373222 OR8B8Q15620 311 aa5.45□□□□□ -1.54
CHD6-202ENST00000373222 ABCA11PQ4W5N1 156 aa5.45□□□□□ -1.54
CHD6-202ENST00000373222 HIKESHIQ53FT3 197 aa5.45□□□□□ -1.54
CHD6-202ENST00000373222 DHRS11Q6UWP2 260 aa5.45□□□□□ -1.54
CHD6-202ENST00000373222 NUFIP2Q7Z417 695 aaKnown RBP5.45□□□□□ -1.54
CHD6-202ENST00000373222 OR2M7Q8NG81 312 aa5.45□□□□□ -1.54
CHD6-202ENST00000373222 SECTM1Q8WVN6 248 aa5.45□□□□□ -1.54
CHD6-202ENST00000373222 MSI2Q96DH6 328 aaKnown RBP5.45□□□□□ -1.54
CHD6-202ENST00000373222 AKR1E2Q96JD6 320 aa5.45□□□□□ -1.54
CHD6-202ENST00000373222 SMIM8Q96KF7 97 aa5.45□□□□□ -1.54
CHD6-202ENST00000373222 MDFIQ99750 246 aa5.45□□□□□ -1.54
CHD6-202ENST00000373222 NRIP2Q9BQI9 281 aa5.45□□□□□ -1.54
CHD6-202ENST00000373222 C20orf24Q9BUV8 137 aa5.45□□□□□ -1.54
CHD6-202ENST00000373222 ESRP2Q9H6T0 727 aaKnown RBP5.45□□□□□ -1.54
CHD6-202ENST00000373222 ZNF703Q9H7S9 590 aaPredicted RBP5.45□□□□□ -1.54
CHD6-202ENST00000373222 NAA60Q9H7X0 242 aa5.45□□□□□ -1.54
CHD6-202ENST00000373222 NECAP2Q9NVZ3 263 aa5.45□□□□□ -1.54
CHD6-202ENST00000373222 PURGQ9UJV8 347 aaKnown RBP5.45□□□□□ -1.54
CHD6-202ENST00000373222 SLC45A2Q9UMX9 530 aa5.45□□□□□ -1.54
CHD6-202ENST00000373222 STARD10Q9Y365 291 aa5.45□□□□□ -1.54
CHD6-202ENST00000373222 IGKV1-6A0A0C4DH72 117 aa5.44□□□□□ -1.54
CHD6-202ENST00000373222 RAB19A4D1S5 217 aa5.44□□□□□ -1.54
CHD6-202ENST00000373222 NKX2-6A6NCS4 301 aa5.44□□□□□ -1.54
CHD6-202ENST00000373222 GJE1A6NN92 205 aa5.44□□□□□ -1.54
CHD6-202ENST00000373222 PAX4O43316 350 aa5.44□□□□□ -1.54
CHD6-202ENST00000373222 PDCD6O75340 191 aa5.44□□□□□ -1.54
CHD6-202ENST00000373222 COL8A1P27658 744 aa5.44□□□□□ -1.54
CHD6-202ENST00000373222 GNRHRP30968 328 aa5.44□□□□□ -1.54
CHD6-202ENST00000373222 NAAAQ02083 359 aa5.44□□□□□ -1.54
CHD6-202ENST00000373222 PJVKQ0ZLH3 352 aa5.44□□□□□ -1.54
CHD6-202ENST00000373222 PRDX4Q13162 271 aa5.44□□□□□ -1.54
CHD6-202ENST00000373222 CLINT1Q14677 625 aa5.44□□□□□ -1.54
CHD6-202ENST00000373222 HAGHLQ6PII5 290 aaPredicted RBP5.44□□□□□ -1.54
CHD6-202ENST00000373222 ZNF818PQ6ZRF7 136 aa5.44□□□□□ -1.54
CHD6-202ENST00000373222 UBALD2Q8IYN6 164 aa5.44□□□□□ -1.54
CHD6-202ENST00000373222 DEFB123Q8N688 67 aa5.44□□□□□ -1.54
CHD6-202ENST00000373222 SCGB3A2Q96PL1 93 aa5.44□□□□□ -1.54
CHD6-202ENST00000373222 TRIB1Q96RU8 372 aa5.44□□□□□ -1.54
CHD6-202ENST00000373222 PLK3Q9H4B4 646 aa5.44□□□□□ -1.54
CHD6-202ENST00000373222 BCO1Q9HAY6 547 aa5.44□□□□□ -1.54
CHD6-202ENST00000373222 ASH1LQ9NR48 2969 aaKnown RBP5.44□□□□□ -1.54
CHD6-202ENST00000373222 MMP26Q9NRE1 261 aa5.44□□□□□ -1.54
CHD6-202ENST00000373222 RCC2Q9P258 522 aaKnown RBP5.44□□□□□ -1.54
CHD6-202ENST00000373222 ZNF816-ZNF321PA0A0X1KG74 233 aa5.43□□□□□ -1.54
CHD6-202ENST00000373222 FAM24AA6NFZ4 105 aa5.43□□□□□ -1.54
CHD6-202ENST00000373222 PRR33A8MZF0 331 aa5.43□□□□□ -1.54
CHD6-202ENST00000373222 FAM157AC9JC47 383 aa5.43□□□□□ -1.54
CHD6-202ENST00000373222 HSBP1L1C9JCN9 74 aa5.43□□□□□ -1.54
CHD6-202ENST00000373222 HS3ST1O14792 307 aa5.43□□□□□ -1.54
CHD6-202ENST00000373222 EIF3GO75821 320 aaKnown RBP eCLIP5.43□□□□□ -1.54
CHD6-202ENST00000373222 APOC1P02654 83 aa5.43□□□□□ -1.54
CHD6-202ENST00000373222 TFF1P04155 84 aa5.43□□□□□ -1.54
CHD6-202ENST00000373222 SERPINA7P05543 415 aa5.43□□□□□ -1.54
CHD6-202ENST00000373222 ITGA3P26006 1051 aa5.43□□□□□ -1.54
CHD6-202ENST00000373222 HOXA6P31267 233 aa5.43□□□□□ -1.54
CHD6-202ENST00000373222 PPT1P50897 306 aa5.43□□□□□ -1.54
CHD6-202ENST00000373222 POLR2GP62487 172 aaKnown RBP eCLIP5.43□□□□□ -1.54
CHD6-202ENST00000373222 ZNF616Q08AN1 781 aa5.43□□□□□ -1.54
CHD6-202ENST00000373222 SRSF6Q13247 344 aaKnown RBP5.43□□□□□ -1.54
CHD6-202ENST00000373222 SURF2Q15527 256 aaPredicted RBP5.43□□□□□ -1.54
CHD6-202ENST00000373222 CXorf66Q5JRM2 361 aaPredicted RBP5.43□□□□□ -1.54
CHD6-202ENST00000373222 SPIN3Q5JUX0 258 aa5.43□□□□□ -1.54
CHD6-202ENST00000373222 FAM53AQ6NSI3 398 aaPredicted RBP5.43□□□□□ -1.54
CHD6-202ENST00000373222 FAM122CQ6P4D5 195 aa5.43□□□□□ -1.54
CHD6-202ENST00000373222 ASCL4Q6XD76 172 aa5.43□□□□□ -1.54
CHD6-202ENST00000373222 SEM1Q6ZVN7 128 aa5.43□□□□□ -1.54
CHD6-202ENST00000373222 DMBX1Q8NFW5 382 aa5.43□□□□□ -1.54
CHD6-202ENST00000373222 RDH5Q92781 318 aa5.43□□□□□ -1.54
CHD6-202ENST00000373222 EXTL1Q92935 676 aa5.43□□□□□ -1.54
CHD6-202ENST00000373222 C1QTNF5Q9BXJ0 243 aa5.43□□□□□ -1.54
CHD6-202ENST00000373222 TTTY12Q9BZ98 90 aa5.43□□□□□ -1.54
CHD6-202ENST00000373222 GLS2Q9UI32 602 aa5.43□□□□□ -1.54
CHD6-202ENST00000373222 ARFGEF3Q5TH69 2177 aa5.43□□□□□ -1.54
CHD6-202ENST00000373222 ZNF732B4DXR9 585 aa5.43□□□□□ -1.54
CHD6-202ENST00000373222 RNASEK-C17orf49H0YIS7 233 aa5.43□□□□□ -1.54
CHD6-202ENST00000373222 HSD17B6O14756 317 aa5.43□□□□□ -1.54
CHD6-202ENST00000373222 TMEM50AO95807 157 aa5.43□□□□□ -1.54
CHD6-202ENST00000373222 PPYP01298 95 aa5.43□□□□□ -1.54
CHD6-202ENST00000373222 ACP1P24666 158 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms