RNA–Protein interactions for RNA: ENST00000369592.1

SMNDC1-201, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMNDC1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-201ENST00000369592 SYT6Q5T7P8 510 aaPredicted RBP16.42■□□□□ 0.22
SMNDC1-201ENST00000369592 FAM53AQ6NSI3 398 aaPredicted RBP16.42■□□□□ 0.22
SMNDC1-201ENST00000369592 CD200R1LQ6Q8B3 271 aa16.42■□□□□ 0.22
SMNDC1-201ENST00000369592 ZNF367Q7RTV3 350 aa16.42■□□□□ 0.22
SMNDC1-201ENST00000369592 THNSL2Q86YJ6 484 aa16.42■□□□□ 0.22
SMNDC1-201ENST00000369592 ARL11Q969Q4 196 aa16.42■□□□□ 0.22
SMNDC1-201ENST00000369592 LIN7BQ9HAP6 207 aa16.42■□□□□ 0.22
SMNDC1-201ENST00000369592 GFOD1Q9NXC2 390 aa16.42■□□□□ 0.22
SMNDC1-201ENST00000369592 NOTCH1P46531 2555 aa16.42■□□□□ 0.22
SMNDC1-201ENST00000369592 H3BUI4 141 aa16.41■□□□□ 0.22
SMNDC1-201ENST00000369592 SLC17A2O00624 439 aa16.41■□□□□ 0.22
SMNDC1-201ENST00000369592 MPIG6BO95866 241 aa16.41■□□□□ 0.22
SMNDC1-201ENST00000369592 HTR2CP28335 458 aa16.41■□□□□ 0.22
SMNDC1-201ENST00000369592 LTC4SQ16873 150 aa16.41■□□□□ 0.22
SMNDC1-201ENST00000369592 CCDC144NLQ6NUI1 221 aa16.41■□□□□ 0.22
SMNDC1-201ENST00000369592 KLHDC1Q8N7A1 406 aa16.41■□□□□ 0.22
SMNDC1-201ENST00000369592 ZNF439Q8NDP4 499 aa16.41■□□□□ 0.22
SMNDC1-201ENST00000369592 OR6M1Q8NGM8 313 aa16.41■□□□□ 0.22
SMNDC1-201ENST00000369592 KCNG3Q8TAE7 436 aa16.41■□□□□ 0.22
SMNDC1-201ENST00000369592 NEK7Q8TDX7 302 aa16.41■□□□□ 0.22
SMNDC1-201ENST00000369592 ST6GALNAC6Q969X2 333 aa16.41■□□□□ 0.22
SMNDC1-201ENST00000369592 RBM14Q96PK6 669 aaKnown RBP16.41■□□□□ 0.22
SMNDC1-201ENST00000369592 OCSTAMPQ9BR26 566 aa16.41■□□□□ 0.22
SMNDC1-201ENST00000369592 PRSS22Q9GZN4 317 aa16.41■□□□□ 0.22
SMNDC1-201ENST00000369592 KCNK15Q9H427 330 aa16.41■□□□□ 0.22
SMNDC1-201ENST00000369592 AMMECR1Q9Y4X0 333 aaPredicted RBP16.41■□□□□ 0.22
SMNDC1-201ENST00000369592 A0A0A6YYD4 124 aa16.4■□□□□ 0.22
SMNDC1-201ENST00000369592 M0QZ24 198 aa16.4■□□□□ 0.22
SMNDC1-201ENST00000369592 ARL6IP5O75915 188 aa16.4■□□□□ 0.22
SMNDC1-201ENST00000369592 OR2F2O95006 317 aa16.4■□□□□ 0.22
SMNDC1-201ENST00000369592 BPNT1O95861 308 aa16.4■□□□□ 0.22
SMNDC1-201ENST00000369592 RCC1P18754 421 aaPredicted RBP16.4■□□□□ 0.22
SMNDC1-201ENST00000369592 MADCAM1Q13477 382 aa16.4■□□□□ 0.22
SMNDC1-201ENST00000369592 ZNF554Q86TJ5 538 aa16.4■□□□□ 0.22
SMNDC1-201ENST00000369592 FAM89BQ8N5H3 189 aa16.4■□□□□ 0.22
SMNDC1-201ENST00000369592 UBALD1Q8TB05 177 aa16.4■□□□□ 0.22
SMNDC1-201ENST00000369592 MRPL30Q8TCC3 161 aaKnown RBP16.4■□□□□ 0.22
SMNDC1-201ENST00000369592 FOXI3A8MTJ6 420 aaPredicted RBP16.39■□□□□ 0.21
SMNDC1-201ENST00000369592 ARHGDIBP52566 201 aa16.39■□□□□ 0.21
SMNDC1-201ENST00000369592 ZNF816Q0VGE8 651 aaPredicted RBP16.39■□□□□ 0.21
SMNDC1-201ENST00000369592 TMEM30BQ3MIR4 351 aa16.39■□□□□ 0.21
SMNDC1-201ENST00000369592 Q6ZPA2 131 aa16.39■□□□□ 0.21
SMNDC1-201ENST00000369592 OR4K15Q8NH41 348 aa16.39■□□□□ 0.21
SMNDC1-201ENST00000369592 RPEQ96AT9 228 aa16.39■□□□□ 0.21
SMNDC1-201ENST00000369592 SULT4A1Q9BR01 284 aa16.39■□□□□ 0.21
SMNDC1-201ENST00000369592 NICN1Q9BSH3 213 aa16.39■□□□□ 0.21
SMNDC1-201ENST00000369592 TMEM59Q9BXS4 323 aa16.39■□□□□ 0.21
SMNDC1-201ENST00000369592 NDUFB11Q9NX14 153 aa16.39■□□□□ 0.21
SMNDC1-201ENST00000369592 A0A1W2PPE3 182 aa16.38■□□□□ 0.21
SMNDC1-201ENST00000369592 UBE2QL1A1L167 161 aa16.38■□□□□ 0.21
SMNDC1-201ENST00000369592 SDCBPO00560 298 aaPredicted RBP16.38■□□□□ 0.21
SMNDC1-201ENST00000369592 LDLRAD4O15165 306 aa16.38■□□□□ 0.21
SMNDC1-201ENST00000369592 HBZP02008 142 aa16.38■□□□□ 0.21
SMNDC1-201ENST00000369592 MNDAP41218 407 aa16.38■□□□□ 0.21
SMNDC1-201ENST00000369592 GNG10P50151 68 aa16.38■□□□□ 0.21
SMNDC1-201ENST00000369592 RAB7AP51149 207 aa16.38■□□□□ 0.21
SMNDC1-201ENST00000369592 ZNF137PP52743 207 aa16.38■□□□□ 0.21
SMNDC1-201ENST00000369592 C6orf183Q5T699 404 aa16.38■□□□□ 0.21
SMNDC1-201ENST00000369592 UBE2UQ5VVX9 321 aa16.38■□□□□ 0.21
SMNDC1-201ENST00000369592 TRAT1Q6PIZ9 186 aa16.38■□□□□ 0.21
SMNDC1-201ENST00000369592 OR2W3Q7Z3T1 314 aa16.38■□□□□ 0.21
SMNDC1-201ENST00000369592 OR8H3Q8N146 312 aa16.38■□□□□ 0.21
SMNDC1-201ENST00000369592 OR1L1Q8NH94 360 aa16.38■□□□□ 0.21
SMNDC1-201ENST00000369592 TOMM40LQ969M1 308 aa16.38■□□□□ 0.21
SMNDC1-201ENST00000369592 SLC25A33Q9BSK2 321 aa16.38■□□□□ 0.21
SMNDC1-201ENST00000369592 YTHDF1Q9BYJ9 559 aaKnown RBP16.38■□□□□ 0.21
SMNDC1-201ENST00000369592 LPAR5Q9H1C0 372 aa16.38■□□□□ 0.21
SMNDC1-201ENST00000369592 TRAPPC2LQ9UL33 140 aa16.38■□□□□ 0.21
SMNDC1-201ENST00000369592 AK6Q9Y3D8 172 aaKnown RBP16.38■□□□□ 0.21
SMNDC1-201ENST00000369592 SHISA3A0PJX4 238 aa16.37■□□□□ 0.21
SMNDC1-201ENST00000369592 TSPAN15O95858 294 aa16.37■□□□□ 0.21
SMNDC1-201ENST00000369592 NAPSAO96009 420 aa16.37■□□□□ 0.21
SMNDC1-201ENST00000369592 CALRP27797 417 aaKnown RBP16.37■□□□□ 0.21
SMNDC1-201ENST00000369592 ZNF134P52741 427 aa16.37■□□□□ 0.21
SMNDC1-201ENST00000369592 EBI3Q14213 229 aa16.37■□□□□ 0.21
SMNDC1-201ENST00000369592 SLC25A48Q6ZT89 311 aaKnown RBP16.37■□□□□ 0.21
SMNDC1-201ENST00000369592 SPARTQ8N0X7 666 aa16.37■□□□□ 0.21
SMNDC1-201ENST00000369592 DRAM1Q8N682 238 aa16.37■□□□□ 0.21
SMNDC1-201ENST00000369592 MMP27Q9H306 513 aa16.37■□□□□ 0.21
SMNDC1-201ENST00000369592 IGHV3-43A0A0B4J1X8 118 aa16.36■□□□□ 0.21
SMNDC1-201ENST00000369592 TRAV1-2A0A0B4J238 106 aa16.36■□□□□ 0.21
SMNDC1-201ENST00000369592 TRDV1A0A1B0GX56 115 aa16.36■□□□□ 0.21
SMNDC1-201ENST00000369592 SLC31A2O15432 143 aa16.36■□□□□ 0.21
SMNDC1-201ENST00000369592 SPINT2O43291 252 aa16.36■□□□□ 0.21
SMNDC1-201ENST00000369592 IGHV3-43DP0DP04 118 aa16.36■□□□□ 0.21
SMNDC1-201ENST00000369592 GALP22466 123 aa16.36■□□□□ 0.21
SMNDC1-201ENST00000369592 CT45A1Q5HYN5 189 aa16.36■□□□□ 0.21
SMNDC1-201ENST00000369592 STEAP3Q658P3 488 aa16.36■□□□□ 0.21
SMNDC1-201ENST00000369592 ZNF880Q6PDB4 577 aa16.36■□□□□ 0.21
SMNDC1-201ENST00000369592 Q6ZTK2 550 aa16.36■□□□□ 0.21
SMNDC1-201ENST00000369592 C6orf201Q7Z4U5 140 aa16.36■□□□□ 0.21
SMNDC1-201ENST00000369592 C5orf24Q7Z6I8 188 aa16.36■□□□□ 0.21
SMNDC1-201ENST00000369592 OR10X1Q8NGY0 326 aa16.36■□□□□ 0.21
SMNDC1-201ENST00000369592 CT45A3Q8NHU0 189 aa16.36■□□□□ 0.21
SMNDC1-201ENST00000369592 FAAP24Q9BTP7 215 aa16.36■□□□□ 0.21
SMNDC1-201ENST00000369592 TAF9BQ9HBM6 251 aa16.36■□□□□ 0.21
SMNDC1-201ENST00000369592 SNRNP70P08621 437 aaKnown RBP16.35■□□□□ 0.21
SMNDC1-201ENST00000369592 FAM106CPP0CH98 169 aa16.35■□□□□ 0.21
SMNDC1-201ENST00000369592 VSIG10L2P0DP72 767 aa16.35■□□□□ 0.21
SMNDC1-201ENST00000369592 P2RY14Q15391 338 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms