RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 HIST1H2BMQ99879 126 aa9.12□□□□□ -0.95
TPM3-212ENST00000368533 NMES1Q9C002 83 aa9.12□□□□□ -0.95
TPM3-212ENST00000368533 RIMS4Q9H426 269 aaPredicted RBP9.12□□□□□ -0.95
TPM3-212ENST00000368533 SIRT7Q9NRC8 400 aa9.12□□□□□ -0.95
TPM3-212ENST00000368533 RALYQ9UKM9 306 aaKnown RBP9.12□□□□□ -0.95
TPM3-212ENST00000368533 LSM5Q9Y4Y9 91 aaKnown RBP9.12□□□□□ -0.95
TPM3-212ENST00000368533 KPTNQ9Y664 436 aa9.12□□□□□ -0.95
TPM3-212ENST00000368533 IGKV1-27A0A075B6S5 117 aa9.12□□□□□ -0.95
TPM3-212ENST00000368533 IGKV1D-8A0A087WSZ0 117 aa9.12□□□□□ -0.95
TPM3-212ENST00000368533 A6NNC1 897 aa9.12□□□□□ -0.95
TPM3-212ENST00000368533 TRGC2P03986 189 aa9.12□□□□□ -0.95
TPM3-212ENST00000368533 RTL6Q6ICC9 239 aa9.12□□□□□ -0.95
TPM3-212ENST00000368533 OR2T2Q6IF00 324 aa9.12□□□□□ -0.95
TPM3-212ENST00000368533 BTNL8Q6UX41 500 aa9.12□□□□□ -0.95
TPM3-212ENST00000368533 C5orf24Q7Z6I8 188 aa9.12□□□□□ -0.95
TPM3-212ENST00000368533 CXorf67Q86X51 503 aaPredicted RBP9.12□□□□□ -0.95
TPM3-212ENST00000368533 OR10AD1Q8NGE0 317 aa9.12□□□□□ -0.95
TPM3-212ENST00000368533 PP6455Q8WZ26 134 aa9.12□□□□□ -0.95
TPM3-212ENST00000368533 DYRK2Q92630 601 aa9.12□□□□□ -0.95
TPM3-212ENST00000368533 LINC00470Q9BZP3 86 aa9.12□□□□□ -0.95
TPM3-212ENST00000368533 TUBA4BQ9H853 241 aa9.12□□□□□ -0.95
TPM3-212ENST00000368533 RAB18Q9NP72 206 aa9.12□□□□□ -0.95
TPM3-212ENST00000368533 CACNA1BQ00975 2339 aa9.12□□□□□ -0.95
TPM3-212ENST00000368533 ZNF705GA8MUZ8 300 aaPredicted RBP9.11□□□□□ -0.95
TPM3-212ENST00000368533 TSPAN15O95858 294 aa9.11□□□□□ -0.95
TPM3-212ENST00000368533 PTGER4P35408 488 aa9.11□□□□□ -0.95
TPM3-212ENST00000368533 WNT5AP41221 380 aa9.11□□□□□ -0.95
TPM3-212ENST00000368533 SUPT4H1P63272 117 aaKnown RBP9.11□□□□□ -0.95
TPM3-212ENST00000368533 SP6Q3SY56 376 aa9.11□□□□□ -0.95
TPM3-212ENST00000368533 HEPN1Q6WQI6 88 aa9.11□□□□□ -0.95
TPM3-212ENST00000368533 Q8NA96 180 aa9.11□□□□□ -0.95
TPM3-212ENST00000368533 DTD1Q8TEA8 209 aa9.11□□□□□ -0.95
TPM3-212ENST00000368533 C2orf50Q96LR7 162 aa9.11□□□□□ -0.95
TPM3-212ENST00000368533 NUDT16L1Q9BRJ7 211 aaKnown RBP9.11□□□□□ -0.95
TPM3-212ENST00000368533 MEMO1Q9Y316 297 aa9.11□□□□□ -0.95
TPM3-212ENST00000368533 FAM215AQ9Y5M1 114 aa9.11□□□□□ -0.95
TPM3-212ENST00000368533 ABCA4P78363 2273 aa9.11□□□□□ -0.95
TPM3-212ENST00000368533 TGIF2-C20orf24A0A0A6YYL0 155 aa9.11□□□□□ -0.95
TPM3-212ENST00000368533 DHRS7CA6NNS2 312 aa9.11□□□□□ -0.95
TPM3-212ENST00000368533 K7ENP7 123 aa9.11□□□□□ -0.95
TPM3-212ENST00000368533 PPP1R2P9O14990 202 aa9.11□□□□□ -0.95
TPM3-212ENST00000368533 NPSP0C0P6 89 aa9.11□□□□□ -0.95
TPM3-212ENST00000368533 CCL1P22362 96 aa9.11□□□□□ -0.95
TPM3-212ENST00000368533 ABCA11PQ4W5N1 156 aa9.11□□□□□ -0.95
TPM3-212ENST00000368533 AADACL3Q5VUY0 350 aa9.11□□□□□ -0.95
TPM3-212ENST00000368533 INO80CQ6PI98 192 aaPredicted RBP9.11□□□□□ -0.95
TPM3-212ENST00000368533 MRPL21Q7Z2W9 205 aaKnown RBP9.11□□□□□ -0.95
TPM3-212ENST00000368533 SGPP2Q8IWX5 399 aa9.11□□□□□ -0.95
TPM3-212ENST00000368533 BCL2L2Q92843 193 aaPredicted RBP9.11□□□□□ -0.95
TPM3-212ENST00000368533 EMG1Q92979 244 aaKnown RBP9.11□□□□□ -0.95
TPM3-212ENST00000368533 BORCS8Q96FH0 119 aa9.11□□□□□ -0.95
TPM3-212ENST00000368533 METTL9Q9H1A3 318 aa9.11□□□□□ -0.95
TPM3-212ENST00000368533 SERPINE3A8MV23 424 aa9.11□□□□□ -0.95
TPM3-212ENST00000368533 NRASP01111 189 aa9.11□□□□□ -0.95
TPM3-212ENST00000368533 IFNA21P01568 189 aa9.11□□□□□ -0.95
TPM3-212ENST00000368533 PET100P0DJ07 73 aa9.11□□□□□ -0.95
TPM3-212ENST00000368533 CTSSP25774 331 aa9.11□□□□□ -0.95
TPM3-212ENST00000368533 IL2RGP31785 369 aa9.11□□□□□ -0.95
TPM3-212ENST00000368533 GNG10P50151 68 aa9.11□□□□□ -0.95
TPM3-212ENST00000368533 GUK1Q16774 197 aa9.11□□□□□ -0.95
TPM3-212ENST00000368533 ALKBH6Q3KRA9 238 aa9.11□□□□□ -0.95
TPM3-212ENST00000368533 ZNF664Q8N3J9 261 aa9.11□□□□□ -0.95
TPM3-212ENST00000368533 SNRNP40Q96DI7 357 aaKnown RBP9.11□□□□□ -0.95
TPM3-212ENST00000368533 RCL1Q9Y2P8 373 aaKnown RBP9.11□□□□□ -0.95
TPM3-212ENST00000368533 A0A0U1RQV5 110 aa9.1□□□□□ -0.95
TPM3-212ENST00000368533 NUDT19A8MXV4 375 aa9.1□□□□□ -0.95
TPM3-212ENST00000368533 HSPB6O14558 160 aa9.1□□□□□ -0.95
TPM3-212ENST00000368533 SS18L1O75177 396 aaPredicted RBP9.1□□□□□ -0.95
TPM3-212ENST00000368533 OR5H8P0DN80 308 aa9.1□□□□□ -0.95
TPM3-212ENST00000368533 GPM6AP51674 278 aa9.1□□□□□ -0.95
TPM3-212ENST00000368533 PRSS54Q6PEW0 395 aa9.1□□□□□ -0.95
TPM3-212ENST00000368533 CRIP3Q6Q6R5 217 aa9.1□□□□□ -0.95
TPM3-212ENST00000368533 IGFL3Q6UXB1 125 aa9.1□□□□□ -0.95
TPM3-212ENST00000368533 HIST3H2BBQ8N257 126 aa9.1□□□□□ -0.95
TPM3-212ENST00000368533 CBY1Q9Y3M2 126 aa9.1□□□□□ -0.95
TPM3-212ENST00000368533 OR5H1A6NKK0 313 aa9.1□□□□□ -0.95
TPM3-212ENST00000368533 TNFSF13O75888 250 aa9.1□□□□□ -0.95
TPM3-212ENST00000368533 DUSP1P28562 367 aa9.1□□□□□ -0.95
TPM3-212ENST00000368533 PHLDA2Q53GA4 152 aa9.1□□□□□ -0.95
TPM3-212ENST00000368533 CALHM1Q8IU99 346 aa9.1□□□□□ -0.95
TPM3-212ENST00000368533 OR10J5Q8NHC4 309 aa9.1□□□□□ -0.95
TPM3-212ENST00000368533 Q8WTZ3 238 aa9.1□□□□□ -0.95
TPM3-212ENST00000368533 STARD4Q96DR4 205 aa9.1□□□□□ -0.95
TPM3-212ENST00000368533 POM121L2Q96KW2 1035 aa9.1□□□□□ -0.95
TPM3-212ENST00000368533 ZNF488Q96MN9 340 aa9.1□□□□□ -0.95
TPM3-212ENST00000368533 OSGIN2Q9Y236 505 aa9.1□□□□□ -0.95
TPM3-212ENST00000368533 V9GYS6 101 aa9.1□□□□□ -0.95
TPM3-212ENST00000368533 hCG_38984A0A1B0GV85 526 aa9.09□□□□□ -0.95
TPM3-212ENST00000368533 SEC14L6B5MCN3 397 aa9.09□□□□□ -0.95
TPM3-212ENST00000368533 RPL36A-HNRNPH2H7BZ11 118 aa9.09□□□□□ -0.95
TPM3-212ENST00000368533 CYB5BO43169 146 aa9.09□□□□□ -0.95
TPM3-212ENST00000368533 WDR1O75083 606 aa9.09□□□□□ -0.95
TPM3-212ENST00000368533 VHLLQ6RSH7 139 aa9.09□□□□□ -0.95
TPM3-212ENST00000368533 GFRALQ6UXV0 394 aa9.09□□□□□ -0.95
TPM3-212ENST00000368533 FAM89BQ8N5H3 189 aa9.09□□□□□ -0.95
TPM3-212ENST00000368533 PACRGQ96M98 296 aaPredicted RBP9.09□□□□□ -0.95
TPM3-212ENST00000368533 RARRES2Q99969 163 aa9.09□□□□□ -0.95
TPM3-212ENST00000368533 OR2J1Q9GZK6 312 aa9.09□□□□□ -0.95
TPM3-212ENST00000368533 C1orf123Q9NWV4 160 aa9.09□□□□□ -0.95
TPM3-212ENST00000368533 PROCRQ9UNN8 238 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms