RNA–Protein interactions for RNA: ENST00000368309.3

UBQLN4-201, Transcript of ubiquilin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN4, Length 3,576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-201ENST00000368309 ZNF766Q5HY98 468 aa15.37■□□□□ 0.05
UBQLN4-201ENST00000368309 PLA2G2CQ5R387 149 aa15.37■□□□□ 0.05
UBQLN4-201ENST00000368309 OR5D13Q8NGL4 314 aa15.37■□□□□ 0.05
UBQLN4-201ENST00000368309 GPR146Q96CH1 333 aa15.36■□□□□ 0.05
UBQLN4-201ENST00000368309 RBM7Q9Y580 266 aaKnown RBP15.36■□□□□ 0.05
UBQLN4-201ENST00000368309 CDIPTO14735 213 aa15.36■□□□□ 0.05
UBQLN4-201ENST00000368309 Q6P435 159 aa15.36■□□□□ 0.05
UBQLN4-201ENST00000368309 H1FOOQ8IZA3 346 aaPredicted RBP15.36■□□□□ 0.05
UBQLN4-201ENST00000368309 RNASE11Q8TAA1 199 aaKnown RBP15.36■□□□□ 0.05
UBQLN4-201ENST00000368309 ESRP2Q9H6T0 727 aaKnown RBP15.36■□□□□ 0.05
UBQLN4-201ENST00000368309 KCNJ16Q9NPI9 418 aa15.36■□□□□ 0.05
UBQLN4-201ENST00000368309 HSPA12AO43301 675 aa15.36■□□□□ 0.05
UBQLN4-201ENST00000368309 LYZL6O75951 148 aa15.36■□□□□ 0.05
UBQLN4-201ENST00000368309 WISP2O76076 250 aa15.36■□□□□ 0.05
UBQLN4-201ENST00000368309 ZNF16P17020 682 aaPredicted RBP15.36■□□□□ 0.05
UBQLN4-201ENST00000368309 PAX9P55771 341 aa15.36■□□□□ 0.05
UBQLN4-201ENST00000368309 Q6ZRM9 215 aa15.36■□□□□ 0.05
UBQLN4-201ENST00000368309 SCCPDHQ8NBX0 429 aa15.36■□□□□ 0.05
UBQLN4-201ENST00000368309 GTF3AQ92664 365 aaKnown RBP15.36■□□□□ 0.05
UBQLN4-201ENST00000368309 GP6Q9HCN6 339 aa15.36■□□□□ 0.05
UBQLN4-201ENST00000368309 ARHGAP21Q5T5U3 1957 aa15.36■□□□□ 0.05
UBQLN4-201ENST00000368309 CACNA1HO95180 2353 aa15.36■□□□□ 0.05
UBQLN4-201ENST00000368309 DIDO1Q9BTC0 2240 aaKnown RBP15.35■□□□□ 0.05
UBQLN4-201ENST00000368309 HOXA4Q00056 320 aaPredicted RBP15.35■□□□□ 0.05
UBQLN4-201ENST00000368309 NANOS1Q8WY41 292 aaKnown RBP15.35■□□□□ 0.05
UBQLN4-201ENST00000368309 TRAPPC2LQ9UL33 140 aa15.35■□□□□ 0.05
UBQLN4-201ENST00000368309 CLEC18AA5D8T8 446 aa15.35■□□□□ 0.05
UBQLN4-201ENST00000368309 J3QT63 122 aa15.35■□□□□ 0.05
UBQLN4-201ENST00000368309 LMO1P25800 156 aa15.35■□□□□ 0.05
UBQLN4-201ENST00000368309 HMGN3Q15651 99 aa15.35■□□□□ 0.05
UBQLN4-201ENST00000368309 TBC1D28Q2M2D7 210 aa15.35■□□□□ 0.05
UBQLN4-201ENST00000368309 LINC00596Q86U02 117 aa15.35■□□□□ 0.05
UBQLN4-201ENST00000368309 CLEC18CQ8NCF0 446 aa15.35■□□□□ 0.05
UBQLN4-201ENST00000368309 PBDC1Q9BVG4 233 aa15.35■□□□□ 0.05
UBQLN4-201ENST00000368309 SLC35B3Q9H1N7 401 aa15.35■□□□□ 0.05
UBQLN4-201ENST00000368309 RNF115Q9Y4L5 304 aa15.35■□□□□ 0.05
UBQLN4-201ENST00000368309 GTF3C1Q12789 2109 aa15.35■□□□□ 0.05
UBQLN4-201ENST00000368309 ZFHX4Q86UP3 3567 aa15.35■□□□□ 0.05
UBQLN4-201ENST00000368309 OR2H2O95918 312 aa15.35■□□□□ 0.05
UBQLN4-201ENST00000368309 GRPP07492 148 aa15.35■□□□□ 0.05
UBQLN4-201ENST00000368309 S100GP29377 79 aa15.35■□□□□ 0.05
UBQLN4-201ENST00000368309 CEBPGP53567 150 aa15.35■□□□□ 0.05
UBQLN4-201ENST00000368309 OR10V1Q8NGI7 309 aa15.35■□□□□ 0.05
UBQLN4-201ENST00000368309 PKIBQ9C010 78 aa15.35■□□□□ 0.05
UBQLN4-201ENST00000368309 TTC28Q96AY4 2481 aa15.34■□□□□ 0.05
UBQLN4-201ENST00000368309 ARG1P05089 322 aa15.34■□□□□ 0.05
UBQLN4-201ENST00000368309 KRBOX4Q5JUW0 171 aa15.34■□□□□ 0.05
UBQLN4-201ENST00000368309 ZNF880Q6PDB4 577 aa15.34■□□□□ 0.05
UBQLN4-201ENST00000368309 BIN3Q9NQY0 253 aa15.34■□□□□ 0.05
UBQLN4-201ENST00000368309 TRBV6-6A0A0A6YYG2 114 aa15.34■□□□□ 0.05
UBQLN4-201ENST00000368309 PPP1CBP62140 327 aa15.34■□□□□ 0.05
UBQLN4-201ENST00000368309 RTL8AQ9BWD3 113 aa15.34■□□□□ 0.05
UBQLN4-201ENST00000368309 KCNS2Q9ULS6 477 aa15.34■□□□□ 0.05
UBQLN4-201ENST00000368309 PUS1Q9Y606 427 aaKnown RBP eCLIP15.34■□□□□ 0.05
UBQLN4-201ENST00000368309 DUXBA0A1W2PPF3 345 aa15.33■□□□□ 0.04
UBQLN4-201ENST00000368309 IGLV2-14P01704 120 aa15.33■□□□□ 0.04
UBQLN4-201ENST00000368309 CEBPDP49716 269 aaPredicted RBP15.33■□□□□ 0.04
UBQLN4-201ENST00000368309 TMEM267Q0VDI3 215 aaPredicted RBP15.33■□□□□ 0.04
UBQLN4-201ENST00000368309 TESK1Q15569 626 aa15.33■□□□□ 0.04
UBQLN4-201ENST00000368309 HAGHQ16775 308 aa15.33■□□□□ 0.04
UBQLN4-201ENST00000368309 HIST1H2BAQ96A08 127 aa15.33■□□□□ 0.04
UBQLN4-201ENST00000368309 BCL2L14Q9BZR8 327 aa15.33■□□□□ 0.04
UBQLN4-201ENST00000368309 SPENQ96T58 3664 aaKnown RBP15.33■□□□□ 0.04
UBQLN4-201ENST00000368309 H0YL77 283 aa15.33■□□□□ 0.04
UBQLN4-201ENST00000368309 WDR1O75083 606 aa15.33■□□□□ 0.04
UBQLN4-201ENST00000368309 ZNF14P17017 642 aaPredicted RBP15.33■□□□□ 0.04
UBQLN4-201ENST00000368309 SPSB3Q6PJ21 355 aa15.33■□□□□ 0.04
UBQLN4-201ENST00000368309 CXorf67Q86X51 503 aaPredicted RBP15.33■□□□□ 0.04
UBQLN4-201ENST00000368309 OR14J1Q9UGF5 321 aa15.33■□□□□ 0.04
UBQLN4-201ENST00000368309 SMPD2O60906 423 aa15.33■□□□□ 0.04
UBQLN4-201ENST00000368309 NXPH2O95156 264 aa15.33■□□□□ 0.04
UBQLN4-201ENST00000368309 CNOT4O95628 575 aaKnown RBP15.33■□□□□ 0.04
UBQLN4-201ENST00000368309 IGKV1-39P01597 117 aa15.33■□□□□ 0.04
UBQLN4-201ENST00000368309 IGKV1D-39P04432 117 aa15.33■□□□□ 0.04
UBQLN4-201ENST00000368309 UBE2NP61088 152 aaKnown RBP15.33■□□□□ 0.04
UBQLN4-201ENST00000368309 CDH20Q9HBT6 801 aa15.33■□□□□ 0.04
UBQLN4-201ENST00000368309 A0A1W2PPH5 198 aa15.32■□□□□ 0.04
UBQLN4-201ENST00000368309 A6NLC8 198 aa15.32■□□□□ 0.04
UBQLN4-201ENST00000368309 IGHV1-2P23083 117 aa15.32■□□□□ 0.04
UBQLN4-201ENST00000368309 SRSF6Q13247 344 aaKnown RBP15.32■□□□□ 0.04
UBQLN4-201ENST00000368309 HABP2Q14520 560 aaPredicted RBP15.32■□□□□ 0.04
UBQLN4-201ENST00000368309 C15orf54Q8N8G6 183 aa15.32■□□□□ 0.04
UBQLN4-201ENST00000368309 SLC25A40Q8TBP6 338 aa15.32■□□□□ 0.04
UBQLN4-201ENST00000368309 SFT2D1Q8WV19 159 aa15.32■□□□□ 0.04
UBQLN4-201ENST00000368309 CACNG5Q9UF02 275 aa15.32■□□□□ 0.04
UBQLN4-201ENST00000368309 KLF2Q9Y5W3 355 aaPredicted RBP15.32■□□□□ 0.04
UBQLN4-201ENST00000368309 BOD1L1Q8NFC6 3051 aa15.32■□□□□ 0.04
UBQLN4-201ENST00000368309 IAPPP10997 89 aa15.32■□□□□ 0.04
UBQLN4-201ENST00000368309 CABLES2Q9BTV7 478 aa15.32■□□□□ 0.04
UBQLN4-201ENST00000368309 SVILO95425 2214 aa15.32■□□□□ 0.04
UBQLN4-201ENST00000368309 FBP1P09467 338 aa15.31■□□□□ 0.04
UBQLN4-201ENST00000368309 SOHLH1Q5JUK2 328 aa15.31■□□□□ 0.04
UBQLN4-201ENST00000368309 ZNF295-AS1Q8N0V1 137 aa15.31■□□□□ 0.04
UBQLN4-201ENST00000368309 IL22RA2Q969J5 263 aa15.31■□□□□ 0.04
UBQLN4-201ENST00000368309 ABHD14BQ96IU4 210 aa15.31■□□□□ 0.04
UBQLN4-201ENST00000368309 RBFOX3A6NFN3 312 aa15.31■□□□□ 0.04
UBQLN4-201ENST00000368309 FAM53AQ6NSI3 398 aaPredicted RBP15.31■□□□□ 0.04
UBQLN4-201ENST00000368309 THNSL2Q86YJ6 484 aa15.31■□□□□ 0.04
UBQLN4-201ENST00000368309 OR1J1Q8NGS3 322 aa15.31■□□□□ 0.04
UBQLN4-201ENST00000368309 A0A1W2PPE2 198 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms