RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 RSPO1Q2MKA7 263 aaPredicted RBP9.87□□□□□ -0.83
USF1-201ENST00000368019 CARD17Q5XLA6 110 aa9.87□□□□□ -0.83
USF1-201ENST00000368019 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.87□□□□□ -0.83
USF1-201ENST00000368019 RPS19BP1Q86WX3 136 aaKnown RBP9.87□□□□□ -0.83
USF1-201ENST00000368019 DOLPP1Q86YN1 238 aa9.87□□□□□ -0.83
USF1-201ENST00000368019 OSR2Q8N2R0 312 aa9.87□□□□□ -0.83
USF1-201ENST00000368019 GPR137CQ8N3F9 429 aa9.87□□□□□ -0.83
USF1-201ENST00000368019 ZNF610Q8N9Z0 462 aa9.87□□□□□ -0.83
USF1-201ENST00000368019 OR5D18Q8NGL1 313 aa9.87□□□□□ -0.83
USF1-201ENST00000368019 FAM213BQ8TBF2 198 aa9.87□□□□□ -0.83
USF1-201ENST00000368019 CD300LFQ8TDQ1 290 aa9.87□□□□□ -0.83
USF1-201ENST00000368019 EDARADDQ8WWZ3 215 aa9.87□□□□□ -0.83
USF1-201ENST00000368019 PIGTQ969N2 578 aa9.87□□□□□ -0.83
USF1-201ENST00000368019 ISOC2Q96AB3 205 aa9.87□□□□□ -0.83
USF1-201ENST00000368019 SGK3Q96BR1 496 aa9.87□□□□□ -0.83
USF1-201ENST00000368019 BSCL2Q96G97 398 aaPredicted RBP9.87□□□□□ -0.83
USF1-201ENST00000368019 SPOCK3Q9BQ16 436 aa9.87□□□□□ -0.83
USF1-201ENST00000368019 GGACTQ9BVM4 153 aa9.87□□□□□ -0.83
USF1-201ENST00000368019 PAPOLGQ9BWT3 736 aaKnown RBP9.87□□□□□ -0.83
USF1-201ENST00000368019 TMEM222Q9H0R3 208 aa9.87□□□□□ -0.83
USF1-201ENST00000368019 LIME1Q9H400 295 aa9.87□□□□□ -0.83
USF1-201ENST00000368019 GAR1Q9NY12 217 aaKnown RBP9.87□□□□□ -0.83
USF1-201ENST00000368019 LRFN1Q9P244 771 aa9.87□□□□□ -0.83
USF1-201ENST00000368019 FBXO7Q9Y3I1 522 aa9.87□□□□□ -0.83
USF1-201ENST00000368019 ZFHX3Q15911 3703 aa9.86□□□□□ -0.83
USF1-201ENST00000368019 A0A1W2PNR3 127 aa9.86□□□□□ -0.83
USF1-201ENST00000368019 C2orf72A6NCS6 295 aa9.86□□□□□ -0.83
USF1-201ENST00000368019 ZNF814B7Z6K7 855 aa9.86□□□□□ -0.83
USF1-201ENST00000368019 HSD17B6O14756 317 aa9.86□□□□□ -0.83
USF1-201ENST00000368019 TXNL1O43396 289 aa9.86□□□□□ -0.83
USF1-201ENST00000368019 DFFBO76075 338 aa9.86□□□□□ -0.83
USF1-201ENST00000368019 CTXN2P0C2S0 81 aa9.86□□□□□ -0.83
USF1-201ENST00000368019 ANOS1P23352 680 aa9.86□□□□□ -0.83
USF1-201ENST00000368019 UCP1P25874 307 aa9.86□□□□□ -0.83
USF1-201ENST00000368019 PPP1CCP36873 323 aaKnown RBP9.86□□□□□ -0.83
USF1-201ENST00000368019 AKR1C3P42330 323 aa9.86□□□□□ -0.83
USF1-201ENST00000368019 FUT6P51993 359 aa9.86□□□□□ -0.83
USF1-201ENST00000368019 MLF1P58340 268 aa9.86□□□□□ -0.83
USF1-201ENST00000368019 TLE4Q04727 773 aa9.86□□□□□ -0.83
USF1-201ENST00000368019 MALLQ13021 153 aa9.86□□□□□ -0.83
USF1-201ENST00000368019 PMS2P11Q13670 270 aa9.86□□□□□ -0.83
USF1-201ENST00000368019 RNPS1Q15287 305 aaKnown RBP9.86□□□□□ -0.83
USF1-201ENST00000368019 AKIRIN2Q53H80 203 aa9.86□□□□□ -0.83
USF1-201ENST00000368019 TMEM182Q6ZP80 229 aaPredicted RBP9.86□□□□□ -0.83
USF1-201ENST00000368019 C20orf196Q8IYI0 205 aa9.86□□□□□ -0.83
USF1-201ENST00000368019 SAXO1Q8IYX7 474 aa9.86□□□□□ -0.83
USF1-201ENST00000368019 OR52M1Q8NGK5 317 aa9.86□□□□□ -0.83
USF1-201ENST00000368019 OR2G3Q8NGZ4 309 aa9.86□□□□□ -0.83
USF1-201ENST00000368019 BORCS8Q96FH0 119 aa9.86□□□□□ -0.83
USF1-201ENST00000368019 VKORC1Q9BQB6 163 aa9.86□□□□□ -0.83
USF1-201ENST00000368019 ELL3Q9HB65 397 aaPredicted RBP9.86□□□□□ -0.83
USF1-201ENST00000368019 RNF150Q9ULK6 438 aa9.86□□□□□ -0.83
USF1-201ENST00000368019 C3orf85A0A1B0GTC6 90 aa9.85□□□□□ -0.83
USF1-201ENST00000368019 F5H5K5 113 aa9.85□□□□□ -0.83
USF1-201ENST00000368019 H3BQ15 152 aa9.85□□□□□ -0.83
USF1-201ENST00000368019 MPPED1O15442 326 aa9.85□□□□□ -0.83
USF1-201ENST00000368019 PHF1O43189 567 aaPredicted RBP9.85□□□□□ -0.83
USF1-201ENST00000368019 XRCC2O43543 280 aa9.85□□□□□ -0.83
USF1-201ENST00000368019 SYNGR3O43761 229 aa9.85□□□□□ -0.83
USF1-201ENST00000368019 SCAF4O95104 1147 aaKnown RBP9.85□□□□□ -0.83
USF1-201ENST00000368019 DIRAS3O95661 229 aa9.85□□□□□ -0.83
USF1-201ENST00000368019 PPYP01298 95 aa9.85□□□□□ -0.83
USF1-201ENST00000368019 ARG1P05089 322 aa9.85□□□□□ -0.83
USF1-201ENST00000368019 GLIPR1P48060 266 aa9.85□□□□□ -0.83
USF1-201ENST00000368019 CLDN15P56746 228 aa9.85□□□□□ -0.83
USF1-201ENST00000368019 UBE2KP61086 200 aa9.85□□□□□ -0.83
USF1-201ENST00000368019 ID3Q02535 119 aa9.85□□□□□ -0.83
USF1-201ENST00000368019 NHLH2Q02577 135 aa9.85□□□□□ -0.83
USF1-201ENST00000368019 ELOBQ15370 118 aa9.85□□□□□ -0.83
USF1-201ENST00000368019 IGSF11Q5DX21 431 aa9.85□□□□□ -0.83
USF1-201ENST00000368019 OR2B11Q5JQS5 317 aa9.85□□□□□ -0.83
USF1-201ENST00000368019 SLC22A25Q6T423 547 aa9.85□□□□□ -0.83
USF1-201ENST00000368019 SPNS3Q6ZMD2 512 aa9.85□□□□□ -0.83
USF1-201ENST00000368019 ZNF600Q6ZNG1 722 aa9.85□□□□□ -0.83
USF1-201ENST00000368019 C16orf47Q6ZP98 133 aaPredicted RBP9.85□□□□□ -0.83
USF1-201ENST00000368019 DPPA2Q7Z7J5 298 aa9.85□□□□□ -0.83
USF1-201ENST00000368019 TMEM252Q8N6L7 170 aa9.85□□□□□ -0.83
USF1-201ENST00000368019 SLC35G3Q8N808 338 aa9.85□□□□□ -0.83
USF1-201ENST00000368019 HSD17B11Q8NBQ5 300 aa9.85□□□□□ -0.83
USF1-201ENST00000368019 TOMM40LQ969M1 308 aa9.85□□□□□ -0.83
USF1-201ENST00000368019 RAB39BQ96DA2 213 aa9.85□□□□□ -0.83
USF1-201ENST00000368019 RCC1LQ96I51 464 aaKnown RBP9.85□□□□□ -0.83
USF1-201ENST00000368019 HDHD3Q9BSH5 251 aaPredicted RBP9.85□□□□□ -0.83
USF1-201ENST00000368019 FAAP24Q9BTP7 215 aa9.85□□□□□ -0.83
USF1-201ENST00000368019 SH3BGRL3Q9H299 93 aa9.85□□□□□ -0.83
USF1-201ENST00000368019 GPR173Q9NS66 373 aa9.85□□□□□ -0.83
USF1-201ENST00000368019 PLEK2Q9NYT0 353 aa9.85□□□□□ -0.83
USF1-201ENST00000368019 NIPBLQ6KC79 2804 aaeCLIP9.84□□□□□ -0.83
USF1-201ENST00000368019 IGSF23A1L1A6 192 aa9.84□□□□□ -0.83
USF1-201ENST00000368019 LRP5LA4QPB2 252 aa9.84□□□□□ -0.83
USF1-201ENST00000368019 C5orf63A6NC05 138 aa9.84□□□□□ -0.83
USF1-201ENST00000368019 GJE1A6NN92 205 aa9.84□□□□□ -0.83
USF1-201ENST00000368019 SHISA8B8ZZ34 492 aa9.84□□□□□ -0.83
USF1-201ENST00000368019 ZNF587BE7ETH6 402 aa9.84□□□□□ -0.83
USF1-201ENST00000368019 NPIPA2E9PIF3 369 aa9.84□□□□□ -0.83
USF1-201ENST00000368019 NPIPA3F8WFD2 350 aa9.84□□□□□ -0.83
USF1-201ENST00000368019 RAMP1O60894 148 aa9.84□□□□□ -0.83
USF1-201ENST00000368019 PTBP3O95758 552 aaKnown RBP9.84□□□□□ -0.83
USF1-201ENST00000368019 OR13C7P0DN81 318 aa9.84□□□□□ -0.83
USF1-201ENST00000368019 DAOP14920 347 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms