RNA–Protein interactions for RNA: ENST00000361246.6

CDC42BPB-201, Transcript of CDC42 binding protein kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPB, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-201ENST00000361246 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.64■□□□□ 0.41
CDC42BPB-201ENST00000361246 ZNF738Q8NE65 137 aa17.64■□□□□ 0.41
CDC42BPB-201ENST00000361246 STXBP6Q8NFX7 210 aa17.64■□□□□ 0.41
CDC42BPB-201ENST00000361246 NPAS1Q99742 590 aa17.64■□□□□ 0.41
CDC42BPB-201ENST00000361246 TLNRD1Q9H1K6 362 aa17.64■□□□□ 0.41
CDC42BPB-201ENST00000361246 AHRRA9YTQ3 701 aa17.64■□□□□ 0.41
CDC42BPB-201ENST00000361246 PDLIM4P50479 330 aa17.64■□□□□ 0.41
CDC42BPB-201ENST00000361246 TUBA4BQ9H853 241 aa17.64■□□□□ 0.41
CDC42BPB-201ENST00000361246 K7N7A8 449 aa17.64■□□□□ 0.41
CDC42BPB-201ENST00000361246 GP1BAP07359 652 aa17.64■□□□□ 0.41
CDC42BPB-201ENST00000361246 DTD1Q8TEA8 209 aa17.64■□□□□ 0.41
CDC42BPB-201ENST00000361246 REPIN1Q9BWE0 567 aaKnown RBP17.64■□□□□ 0.41
CDC42BPB-201ENST00000361246 TRAV34A0A0B4J273 112 aa17.64■□□□□ 0.41
CDC42BPB-201ENST00000361246 IGKV1-8A0A0C4DH67 115 aa17.64■□□□□ 0.41
CDC42BPB-201ENST00000361246 TMEM229AB2RXF0 380 aa17.64■□□□□ 0.41
CDC42BPB-201ENST00000361246 J3QR06 171 aa17.64■□□□□ 0.41
CDC42BPB-201ENST00000361246 ADTRPQ96IZ2 230 aa17.64■□□□□ 0.41
CDC42BPB-201ENST00000361246 CDRT15L2A8MXV6 281 aa17.64■□□□□ 0.41
CDC42BPB-201ENST00000361246 PCMT1P22061 227 aa17.64■□□□□ 0.41
CDC42BPB-201ENST00000361246 HOXC8P31273 242 aa17.64■□□□□ 0.41
CDC42BPB-201ENST00000361246 GUK1Q16774 197 aa17.64■□□□□ 0.41
CDC42BPB-201ENST00000361246 TCTE3Q8IZS6 198 aa17.64■□□□□ 0.41
CDC42BPB-201ENST00000361246 COL5A3P25940 1745 aaPredicted RBP17.63■□□□□ 0.41
CDC42BPB-201ENST00000361246 RNASE1P07998 156 aaKnown RBP17.63■□□□□ 0.41
CDC42BPB-201ENST00000361246 SSX1Q16384 188 aa17.63■□□□□ 0.41
CDC42BPB-201ENST00000361246 S4R3C0 116 aa17.63■□□□□ 0.41
CDC42BPB-201ENST00000361246 J3QT63 122 aa17.63■□□□□ 0.41
CDC42BPB-201ENST00000361246 GZMHP20718 246 aa17.63■□□□□ 0.41
CDC42BPB-201ENST00000361246 XAF1Q6GPH4 301 aa17.63■□□□□ 0.41
CDC42BPB-201ENST00000361246 OR2C3Q8N628 320 aa17.63■□□□□ 0.41
CDC42BPB-201ENST00000361246 ZDHHC22Q8N966 263 aa17.63■□□□□ 0.41
CDC42BPB-201ENST00000361246 LOC105371242A0A075B767 164 aa17.63■□□□□ 0.41
CDC42BPB-201ENST00000361246 PRSS1P07477 247 aa17.63■□□□□ 0.41
CDC42BPB-201ENST00000361246 COX6A1P12074 109 aa17.63■□□□□ 0.41
CDC42BPB-201ENST00000361246 RPS4Y1P22090 263 aaKnown RBP17.63■□□□□ 0.41
CDC42BPB-201ENST00000361246 TMEM105Q8N8V8 129 aa17.63■□□□□ 0.41
CDC42BPB-201ENST00000361246 SLC2A9Q9NRM0 540 aa17.63■□□□□ 0.41
CDC42BPB-201ENST00000361246 HS3ST3B1Q9Y662 390 aa17.63■□□□□ 0.41
CDC42BPB-201ENST00000361246 TMEM210A6NLX4 147 aa17.63■□□□□ 0.41
CDC42BPB-201ENST00000361246 EBLN2Q6P2I7 272 aa17.63■□□□□ 0.41
CDC42BPB-201ENST00000361246 SIGLEC12Q96PQ1 595 aa17.63■□□□□ 0.41
CDC42BPB-201ENST00000361246 GHITMQ9H3K2 345 aa17.63■□□□□ 0.41
CDC42BPB-201ENST00000361246 FCN1O00602 326 aa17.62■□□□□ 0.41
CDC42BPB-201ENST00000361246 RANP62826 216 aaKnown RBP17.62■□□□□ 0.41
CDC42BPB-201ENST00000361246 SNAI3Q3KNW1 292 aa17.62■□□□□ 0.41
CDC42BPB-201ENST00000361246 HSD17B13Q7Z5P4 300 aaPredicted RBP17.62■□□□□ 0.41
CDC42BPB-201ENST00000361246 DOLPP1Q86YN1 238 aa17.62■□□□□ 0.41
CDC42BPB-201ENST00000361246 ANXA10Q9UJ72 324 aa17.62■□□□□ 0.41
CDC42BPB-201ENST00000361246 FAM27E3Q08E93 113 aa17.62■□□□□ 0.41
CDC42BPB-201ENST00000361246 DCAF12L2Q5VW00 463 aa17.62■□□□□ 0.41
CDC42BPB-201ENST00000361246 NIT2Q9NQR4 276 aa17.62■□□□□ 0.41
CDC42BPB-201ENST00000361246 DLEC1Q9Y238 1755 aa17.62■□□□□ 0.41
CDC42BPB-201ENST00000361246 VWA1Q6PCB0 445 aa17.62■□□□□ 0.41
CDC42BPB-201ENST00000361246 RFLNBQ8N5W9 214 aa17.62■□□□□ 0.41
CDC42BPB-201ENST00000361246 OR8G5Q8NG78 346 aa17.62■□□□□ 0.41
CDC42BPB-201ENST00000361246 OR5A2Q8NGI9 324 aa17.62■□□□□ 0.41
CDC42BPB-201ENST00000361246 FAM216AQ8WUB2 273 aa17.62■□□□□ 0.41
CDC42BPB-201ENST00000361246 PPIAL4CA0A0B4J2A2 164 aa17.61■□□□□ 0.41
CDC42BPB-201ENST00000361246 PPIAL4GP0DN37 164 aa17.61■□□□□ 0.41
CDC42BPB-201ENST00000361246 CCDC144NLQ6NUI1 221 aa17.61■□□□□ 0.41
CDC42BPB-201ENST00000361246 U3KQ87 197 aa17.61■□□□□ 0.41
CDC42BPB-201ENST00000361246 TO15178 435 aa17.61■□□□□ 0.41
CDC42BPB-201ENST00000361246 CELA3AP09093 270 aa17.61■□□□□ 0.41
CDC42BPB-201ENST00000361246 NKX2-6A6NCS4 301 aa17.61■□□□□ 0.41
CDC42BPB-201ENST00000361246 DAOP14920 347 aa17.61■□□□□ 0.41
CDC42BPB-201ENST00000361246 SULT1A1P50225 295 aa17.61■□□□□ 0.41
CDC42BPB-201ENST00000361246 TWIST1Q15672 202 aa17.61■□□□□ 0.41
CDC42BPB-201ENST00000361246 C10orf111Q8N326 155 aa17.61■□□□□ 0.41
CDC42BPB-201ENST00000361246 DEGS2Q6QHC5 323 aa17.61■□□□□ 0.41
CDC42BPB-201ENST00000361246 METTL26Q96S19 204 aa17.61■□□□□ 0.41
CDC42BPB-201ENST00000361246 PPYP01298 95 aa17.61■□□□□ 0.41
CDC42BPB-201ENST00000361246 MPV17LQ2QL34 196 aa17.61■□□□□ 0.41
CDC42BPB-201ENST00000361246 C11orf44Q8N8P7 122 aa17.61■□□□□ 0.41
CDC42BPB-201ENST00000361246 ZNF596Q8TC21 504 aa17.61■□□□□ 0.41
CDC42BPB-201ENST00000361246 TRAV8-7A0A075B6U6 113 aa17.61■□□□□ 0.41
CDC42BPB-201ENST00000361246 PSMB2P49721 201 aa17.61■□□□□ 0.41
CDC42BPB-201ENST00000361246 LGALSLQ3ZCW2 172 aaPredicted RBP17.61■□□□□ 0.41
CDC42BPB-201ENST00000361246 ZNF66Q6ZN08 573 aa17.61■□□□□ 0.41
CDC42BPB-201ENST00000361246 SNX22Q96L94 193 aa17.61■□□□□ 0.41
CDC42BPB-201ENST00000361246 PLAC1Q9HBJ0 212 aa17.61■□□□□ 0.41
CDC42BPB-201ENST00000361246 YTHDF2Q9Y5A9 579 aaKnown RBP17.61■□□□□ 0.41
CDC42BPB-201ENST00000361246 FGF5P12034 268 aa17.6■□□□□ 0.41
CDC42BPB-201ENST00000361246 VAMP3Q15836 100 aa17.6■□□□□ 0.41
CDC42BPB-201ENST00000361246 FBXL17Q9UF56 701 aa17.6■□□□□ 0.41
CDC42BPB-201ENST00000361246 ZDHHC8Q9ULC8 765 aa17.6■□□□□ 0.41
CDC42BPB-201ENST00000361246 TBX19O60806 448 aa17.6■□□□□ 0.41
CDC42BPB-201ENST00000361246 NDUFB6O95139 128 aa17.6■□□□□ 0.41
CDC42BPB-201ENST00000361246 COL8A1P27658 744 aa17.6■□□□□ 0.41
CDC42BPB-201ENST00000361246 LYZL2Q7Z4W2 148 aa17.6■□□□□ 0.41
CDC42BPB-201ENST00000361246 ARL6IP6Q8N6S5 226 aa17.6■□□□□ 0.41
CDC42BPB-201ENST00000361246 IGHV3OR16-13A0A075B7E8 117 aa17.6■□□□□ 0.41
CDC42BPB-201ENST00000361246 IGHV3-74A0A0B4J1X5 117 aa17.6■□□□□ 0.41
CDC42BPB-201ENST00000361246 LMX1BO60663 402 aa17.6■□□□□ 0.41
CDC42BPB-201ENST00000361246 VSIG10L2P0DP72 767 aa17.6■□□□□ 0.41
CDC42BPB-201ENST00000361246 SPANXN1Q5VSR9 72 aa17.6■□□□□ 0.41
CDC42BPB-201ENST00000361246 MMP24Q9Y5R2 645 aa17.6■□□□□ 0.41
CDC42BPB-201ENST00000361246 ZIC3O60481 467 aa17.6■□□□□ 0.41
CDC42BPB-201ENST00000361246 HBZP02008 142 aa17.6■□□□□ 0.41
CDC42BPB-201ENST00000361246 IGSF11Q5DX21 431 aa17.6■□□□□ 0.41
CDC42BPB-201ENST00000361246 MTFP1Q9UDX5 166 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 136.5 ms