RNA–Protein interactions for RNA: ENST00000360495.9

CCDC144A-203, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,545 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-203ENST00000360495 Q5BKY6 102 aa11.74□□□□□ -0.53
CCDC144A-203ENST00000360495 CALHM1Q8IU99 346 aa11.74□□□□□ -0.53
CCDC144A-203ENST00000360495 DNAJC4Q9NNZ3 241 aa11.74□□□□□ -0.53
CCDC144A-203ENST00000360495 MYO5AQ9Y4I1 1855 aaKnown RBP11.74□□□□□ -0.53
CCDC144A-203ENST00000360495 AGAP20933 346 aa11.74□□□□□ -0.53
CCDC144A-203ENST00000360495 KIR2DL1P43626 348 aaPredicted RBP11.74□□□□□ -0.53
CCDC144A-203ENST00000360495 KIR2DL2P43627 348 aaPredicted RBP11.74□□□□□ -0.53
CCDC144A-203ENST00000360495 GLIPR1P48060 266 aa11.74□□□□□ -0.53
CCDC144A-203ENST00000360495 GZMMP51124 257 aa11.74□□□□□ -0.53
CCDC144A-203ENST00000360495 NANOS3P60323 173 aaKnown RBP11.74□□□□□ -0.53
CCDC144A-203ENST00000360495 SOSTQ9BQB4 213 aa11.74□□□□□ -0.53
CCDC144A-203ENST00000360495 OR2J1Q9GZK6 312 aa11.74□□□□□ -0.53
CCDC144A-203ENST00000360495 PRNDQ9UKY0 176 aa11.74□□□□□ -0.53
CCDC144A-203ENST00000360495 MYO9BQ13459 2157 aa11.74□□□□□ -0.53
CCDC144A-203ENST00000360495 ZNF729A6NN14 1252 aaPredicted RBP11.74□□□□□ -0.53
CCDC144A-203ENST00000360495 J3KRW8 73 aa11.74□□□□□ -0.53
CCDC144A-203ENST00000360495 HLA-DRB1P01911 266 aa11.74□□□□□ -0.53
CCDC144A-203ENST00000360495 AMY1AP04745 511 aa11.74□□□□□ -0.53
CCDC144A-203ENST00000360495 SRIP30626 198 aa11.74□□□□□ -0.53
CCDC144A-203ENST00000360495 ISXQ2M1V0 245 aa11.74□□□□□ -0.53
CCDC144A-203ENST00000360495 ZNF788Q6ZQV5 615 aa11.74□□□□□ -0.53
CCDC144A-203ENST00000360495 PRNTQ86SH4 94 aa11.74□□□□□ -0.53
CCDC144A-203ENST00000360495 KCNK7Q9Y2U2 307 aa11.74□□□□□ -0.53
CCDC144A-203ENST00000360495 F11RQ9Y624 299 aaKnown RBP11.74□□□□□ -0.53
CCDC144A-203ENST00000360495 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.74□□□□□ -0.53
CCDC144A-203ENST00000360495 GRIFINA4D1Z8 144 aa11.74□□□□□ -0.53
CCDC144A-203ENST00000360495 C3orf80F5H4A9 247 aa11.74□□□□□ -0.53
CCDC144A-203ENST00000360495 METAP1P53582 386 aa11.74□□□□□ -0.53
CCDC144A-203ENST00000360495 FOXQ1Q9C009 403 aa11.74□□□□□ -0.53
CCDC144A-203ENST00000360495 LILRA5A6NI73 299 aa11.73□□□□□ -0.53
CCDC144A-203ENST00000360495 OR10D3Q8NH80 312 aa11.73□□□□□ -0.53
CCDC144A-203ENST00000360495 PGLYRP3Q96LB9 341 aa11.73□□□□□ -0.53
CCDC144A-203ENST00000360495 RASL11BQ9BPW5 248 aa11.73□□□□□ -0.53
CCDC144A-203ENST00000360495 PAXXQ9BUH6 204 aa11.73□□□□□ -0.53
CCDC144A-203ENST00000360495 DNPH1O43598 174 aa11.73□□□□□ -0.53
CCDC144A-203ENST00000360495 TGIF1Q15583 401 aa11.73□□□□□ -0.53
CCDC144A-203ENST00000360495 FBXO46Q6PJ61 603 aaPredicted RBP11.73□□□□□ -0.53
CCDC144A-203ENST00000360495 ZNF764Q96H86 408 aaPredicted RBP11.73□□□□□ -0.53
CCDC144A-203ENST00000360495 RPL36A-HNRNPH2H7BZ11 118 aa11.73□□□□□ -0.53
CCDC144A-203ENST00000360495 GNG7O60262 68 aa11.73□□□□□ -0.53
CCDC144A-203ENST00000360495 LSM6P62312 80 aaKnown RBP11.73□□□□□ -0.53
CCDC144A-203ENST00000360495 RNPS1Q15287 305 aaKnown RBP11.73□□□□□ -0.53
CCDC144A-203ENST00000360495 TXNDC17Q9BRA2 123 aa11.73□□□□□ -0.53
CCDC144A-203ENST00000360495 CXXC4Q9H2H0 198 aa11.73□□□□□ -0.53
CCDC144A-203ENST00000360495 CISD1Q9NZ45 108 aaKnown RBP11.73□□□□□ -0.53
CCDC144A-203ENST00000360495 NWD2Q9ULI1 1742 aa11.73□□□□□ -0.53
CCDC144A-203ENST00000360495 ZBTB34Q8NCN2 500 aa11.73□□□□□ -0.53
CCDC144A-203ENST00000360495 OR2Y1Q8NGV0 311 aa11.73□□□□□ -0.53
CCDC144A-203ENST00000360495 PXMP4Q9Y6I8 212 aa11.73□□□□□ -0.53
CCDC144A-203ENST00000360495 LAMA4Q16363 1823 aa11.73□□□□□ -0.53
CCDC144A-203ENST00000360495 SPAG17Q6Q759 2223 aa11.73□□□□□ -0.53
CCDC144A-203ENST00000360495 A0A1W2PPC4 97 aa11.73□□□□□ -0.53
CCDC144A-203ENST00000360495 LMX1BO60663 402 aa11.73□□□□□ -0.53
CCDC144A-203ENST00000360495 COX7A1P24310 79 aa11.73□□□□□ -0.53
CCDC144A-203ENST00000360495 TWIST1Q15672 202 aa11.73□□□□□ -0.53
CCDC144A-203ENST00000360495 APCDD1LQ8NCL9 501 aa11.73□□□□□ -0.53
CCDC144A-203ENST00000360495 ASCL3Q9NQ33 180 aa11.73□□□□□ -0.53
CCDC144A-203ENST00000360495 VN1R4Q7Z5H5 301 aa11.72□□□□□ -0.53
CCDC144A-203ENST00000360495 SHROOM3Q8TF72 1996 aa11.72□□□□□ -0.53
CCDC144A-203ENST00000360495 B4E171 279 aa11.72□□□□□ -0.53
CCDC144A-203ENST00000360495 ZNF324O75467 553 aaPredicted RBP11.72□□□□□ -0.53
CCDC144A-203ENST00000360495 CD1AP06126 327 aa11.72□□□□□ -0.53
CCDC144A-203ENST00000360495 GALNSP34059 522 aa11.72□□□□□ -0.53
CCDC144A-203ENST00000360495 PRRX1P54821 245 aa11.72□□□□□ -0.53
CCDC144A-203ENST00000360495 FAM222BQ8WU58 562 aa11.72□□□□□ -0.53
CCDC144A-203ENST00000360495 GABRG3Q99928 467 aa11.72□□□□□ -0.53
CCDC144A-203ENST00000360495 GPR132Q9UNW8 380 aa11.72□□□□□ -0.53
CCDC144A-203ENST00000360495 TRAV39A0A0B4J263 110 aa11.72□□□□□ -0.53
CCDC144A-203ENST00000360495 PNLIPP16233 465 aa11.72□□□□□ -0.53
CCDC144A-203ENST00000360495 P2RY4P51582 365 aa11.72□□□□□ -0.53
CCDC144A-203ENST00000360495 HERPUD1Q15011 391 aa11.72□□□□□ -0.53
CCDC144A-203ENST00000360495 ZIC1Q15915 447 aa11.72□□□□□ -0.53
CCDC144A-203ENST00000360495 SPANXN1Q5VSR9 72 aa11.72□□□□□ -0.53
CCDC144A-203ENST00000360495 WDR31Q8NA23 367 aa11.72□□□□□ -0.53
CCDC144A-203ENST00000360495 LSM10Q969L4 123 aaKnown RBP11.72□□□□□ -0.53
CCDC144A-203ENST00000360495 TMEM208Q9BTX3 173 aa11.72□□□□□ -0.53
CCDC144A-203ENST00000360495 CXorf51AA0A1B0GTR3 108 aa11.72□□□□□ -0.53
CCDC144A-203ENST00000360495 A0A1W2PPC1 479 aa11.72□□□□□ -0.53
CCDC144A-203ENST00000360495 DNASE2O00115 360 aaPredicted RBP11.72□□□□□ -0.53
CCDC144A-203ENST00000360495 KIR3DL2P43630 455 aa11.72□□□□□ -0.53
CCDC144A-203ENST00000360495 KIAA1644Q3SXP7 199 aa11.72□□□□□ -0.53
CCDC144A-203ENST00000360495 NIT1Q86X76 327 aa11.72□□□□□ -0.53
CCDC144A-203ENST00000360495 POU2F2P09086 479 aa11.71□□□□□ -0.53
CCDC144A-203ENST00000360495 ZNF83P51522 516 aa11.71□□□□□ -0.53
CCDC144A-203ENST00000360495 RBPMS2Q6ZRY4 209 aaKnown RBP11.71□□□□□ -0.53
CCDC144A-203ENST00000360495 ST6GALNAC3Q8NDV1 305 aa11.71□□□□□ -0.53
CCDC144A-203ENST00000360495 PMCHL2Q9BQD1 86 aa11.71□□□□□ -0.53
CCDC144A-203ENST00000360495 CHST5Q9GZS9 411 aa11.71□□□□□ -0.53
CCDC144A-203ENST00000360495 ZDHHC8Q9ULC8 765 aa11.71□□□□□ -0.53
CCDC144A-203ENST00000360495 MOSPD3O75425 235 aa11.71□□□□□ -0.53
CCDC144A-203ENST00000360495 FCGR3AP08637 254 aa11.71□□□□□ -0.53
CCDC144A-203ENST00000360495 HOXA4Q00056 320 aaPredicted RBP11.71□□□□□ -0.53
CCDC144A-203ENST00000360495 RFLNBQ8N5W9 214 aa11.71□□□□□ -0.53
CCDC144A-203ENST00000360495 VSTM2LQ96N03 204 aa11.71□□□□□ -0.53
CCDC144A-203ENST00000360495 TOPAZ1Q8N9V7 1692 aa11.71□□□□□ -0.53
CCDC144A-203ENST00000360495 GGTLC2Q14390 218 aa11.71□□□□□ -0.53
CCDC144A-203ENST00000360495 AMMECR1LQ6DCA0 310 aa11.71□□□□□ -0.53
CCDC144A-203ENST00000360495 FAM216AQ8WUB2 273 aa11.71□□□□□ -0.53
CCDC144A-203ENST00000360495 TM4SF19Q96DZ7 209 aa11.71□□□□□ -0.53
CCDC144A-203ENST00000360495 KLHDC2Q9Y2U9 406 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms