RNA–Protein interactions for RNA: ENST00000360238.6

CUEDC1-201, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CUEDC1, Length 2,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-201ENST00000360238 A0A1W2PR80 420 aa22.33■■□□□ 1.17
CUEDC1-201ENST00000360238 LYZL6O75951 148 aa22.33■■□□□ 1.17
CUEDC1-201ENST00000360238 ERVS71-1P61550 626 aa22.33■■□□□ 1.17
CUEDC1-201ENST00000360238 GCNT2Q8N0V5 402 aa22.33■■□□□ 1.17
CUEDC1-201ENST00000360238 OR5C1Q8NGR4 320 aa22.33■■□□□ 1.17
CUEDC1-201ENST00000360238 SNIP1Q8TAD8 396 aaKnown RBP22.33■■□□□ 1.17
CUEDC1-201ENST00000360238 HSPA12AO43301 675 aa22.33■■□□□ 1.16
CUEDC1-201ENST00000360238 TMEM50AO95807 157 aa22.33■■□□□ 1.16
CUEDC1-201ENST00000360238 NFYBP25208 207 aa22.33■■□□□ 1.16
CUEDC1-201ENST00000360238 ATP6V0CP27449 155 aa22.33■■□□□ 1.16
CUEDC1-201ENST00000360238 ODF3L1Q8IXM7 274 aa22.33■■□□□ 1.16
CUEDC1-201ENST00000360238 KDF1Q8NAX2 398 aaPredicted RBP22.33■■□□□ 1.16
CUEDC1-201ENST00000360238 OR51H1Q8NH63 302 aa22.33■■□□□ 1.16
CUEDC1-201ENST00000360238 TRIB1Q96RU8 372 aa22.33■■□□□ 1.16
CUEDC1-201ENST00000360238 PBDC1Q9BVG4 233 aa22.33■■□□□ 1.16
CUEDC1-201ENST00000360238 MBNL3Q9NUK0 354 aaKnown RBP22.33■■□□□ 1.16
CUEDC1-201ENST00000360238 A0A1B0GW64 132 aa22.32■■□□□ 1.16
CUEDC1-201ENST00000360238 NXPH2O95156 264 aa22.32■■□□□ 1.16
CUEDC1-201ENST00000360238 OMGP23515 440 aa22.32■■□□□ 1.16
CUEDC1-201ENST00000360238 TESK1Q15569 626 aa22.32■■□□□ 1.16
CUEDC1-201ENST00000360238 OR8G5Q8NG78 346 aa22.32■■□□□ 1.16
CUEDC1-201ENST00000360238 OR1J1Q8NGS3 322 aa22.32■■□□□ 1.16
CUEDC1-201ENST00000360238 TRAPPC2LQ9UL33 140 aa22.32■■□□□ 1.16
CUEDC1-201ENST00000360238 SH2D1BO14796 132 aa22.32■■□□□ 1.16
CUEDC1-201ENST00000360238 ACAA1P09110 424 aaPredicted RBP22.32■■□□□ 1.16
CUEDC1-201ENST00000360238 PSG2P11465 335 aa22.32■■□□□ 1.16
CUEDC1-201ENST00000360238 IGFL2Q6UWQ7 119 aa22.32■■□□□ 1.16
CUEDC1-201ENST00000360238 OR10Z1Q8NGY1 313 aa22.32■■□□□ 1.16
CUEDC1-201ENST00000360238 OR2G3Q8NGZ4 309 aa22.32■■□□□ 1.16
CUEDC1-201ENST00000360238 FAM213BQ8TBF2 198 aa22.32■■□□□ 1.16
CUEDC1-201ENST00000360238 WIPI2Q9Y4P8 454 aa22.32■■□□□ 1.16
CUEDC1-201ENST00000360238 CDIPTO14735 213 aa22.31■■□□□ 1.16
CUEDC1-201ENST00000360238 NKX2-8O15522 239 aa22.31■■□□□ 1.16
CUEDC1-201ENST00000360238 CHST1O43916 411 aa22.31■■□□□ 1.16
CUEDC1-201ENST00000360238 IGLV2-14P01704 120 aa22.31■■□□□ 1.16
CUEDC1-201ENST00000360238 FDCSPQ8NFU4 85 aa22.31■■□□□ 1.16
CUEDC1-201ENST00000360238 EIF5A2Q9GZV4 153 aaKnown RBP22.31■■□□□ 1.16
CUEDC1-201ENST00000360238 MLXQ9UH92 298 aa22.31■■□□□ 1.16
CUEDC1-201ENST00000360238 PAX6P26367 422 aa22.31■■□□□ 1.16
CUEDC1-201ENST00000360238 DYNLT3P51808 116 aa22.31■■□□□ 1.16
CUEDC1-201ENST00000360238 PSG7Q13046 419 aa22.31■■□□□ 1.16
CUEDC1-201ENST00000360238 ALKBH6Q3KRA9 238 aa22.31■■□□□ 1.16
CUEDC1-201ENST00000360238 LSM10Q969L4 123 aaKnown RBP22.31■■□□□ 1.16
CUEDC1-201ENST00000360238 GPR146Q96CH1 333 aa22.31■■□□□ 1.16
CUEDC1-201ENST00000360238 GNPNAT1Q96EK6 184 aaPredicted RBP22.31■■□□□ 1.16
CUEDC1-201ENST00000360238 A0A0G2JRQ6 117 aa22.3■■□□□ 1.16
CUEDC1-201ENST00000360238 AQP7O14520 342 aa22.3■■□□□ 1.16
CUEDC1-201ENST00000360238 COX5AP20674 150 aa22.3■■□□□ 1.16
CUEDC1-201ENST00000360238 CCL11P51671 97 aa22.3■■□□□ 1.16
CUEDC1-201ENST00000360238 FIP1L1Q6UN15 594 aaKnown RBP22.3■■□□□ 1.16
CUEDC1-201ENST00000360238 C1orf162Q8NEQ5 155 aaPredicted RBP22.3■■□□□ 1.16
CUEDC1-201ENST00000360238 CELSR3Q9NYQ7 3312 aa22.3■■□□□ 1.16
CUEDC1-201ENST00000360238 CBR1P16152 277 aa22.29■■□□□ 1.16
CUEDC1-201ENST00000360238 PAX9P55771 341 aa22.29■■□□□ 1.16
CUEDC1-201ENST00000360238 HES4Q9HCC6 221 aa22.29■■□□□ 1.16
CUEDC1-201ENST00000360238 SMCO4Q9NRQ5 59 aa22.29■■□□□ 1.16
CUEDC1-201ENST00000360238 LIN7CQ9NUP9 197 aaKnown RBP22.29■■□□□ 1.16
CUEDC1-201ENST00000360238 CST7O76096 145 aa22.29■■□□□ 1.16
CUEDC1-201ENST00000360238 RAB40CQ96S21 281 aa22.29■■□□□ 1.16
CUEDC1-201ENST00000360238 SMDT1Q9H4I9 107 aa22.29■■□□□ 1.16
CUEDC1-201ENST00000360238 CACNA1GO43497 2377 aa22.29■■□□□ 1.16
CUEDC1-201ENST00000360238 IGKV3-15P01624 115 aa22.28■■□□□ 1.16
CUEDC1-201ENST00000360238 EPHA1P21709 976 aa22.28■■□□□ 1.16
CUEDC1-201ENST00000360238 HOXC12P31275 282 aa22.28■■□□□ 1.16
CUEDC1-201ENST00000360238 STX12Q86Y82 276 aa22.28■■□□□ 1.16
CUEDC1-201ENST00000360238 KLF14Q8TD94 323 aaPredicted RBP22.28■■□□□ 1.16
CUEDC1-201ENST00000360238 ATP5SQ99766 215 aa22.28■■□□□ 1.16
CUEDC1-201ENST00000360238 ASCL3Q9NQ33 180 aa22.28■■□□□ 1.16
CUEDC1-201ENST00000360238 TRAV39A0A0B4J263 110 aa22.28■■□□□ 1.16
CUEDC1-201ENST00000360238 KIAA1324LA8MWY0 1029 aaPredicted RBP22.28■■□□□ 1.16
CUEDC1-201ENST00000360238 NXPH3O95157 252 aa22.28■■□□□ 1.16
CUEDC1-201ENST00000360238 FTH1P19P0C7X4 201 aa22.28■■□□□ 1.16
CUEDC1-201ENST00000360238 CEACAM1P13688 526 aa22.28■■□□□ 1.16
CUEDC1-201ENST00000360238 PPP1CCP36873 323 aaKnown RBP22.28■■□□□ 1.16
CUEDC1-201ENST00000360238 CD200P41217 278 aa22.28■■□□□ 1.16
CUEDC1-201ENST00000360238 RPL23AP62750 156 aaKnown RBP22.28■■□□□ 1.16
CUEDC1-201ENST00000360238 PRR18Q8N4B5 295 aa22.28■■□□□ 1.16
CUEDC1-201ENST00000360238 RNASE11Q8TAA1 199 aaKnown RBP22.28■■□□□ 1.16
CUEDC1-201ENST00000360238 TRAV17A0A0B4J275 112 aa22.27■■□□□ 1.16
CUEDC1-201ENST00000360238 BTBD17A6NE02 478 aa22.27■■□□□ 1.16
CUEDC1-201ENST00000360238 CNEP1R1Q8N9A8 125 aa22.27■■□□□ 1.16
CUEDC1-201ENST00000360238 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP22.26■■□□□ 1.15
CUEDC1-201ENST00000360238 NDUFA2O43678 99 aa22.26■■□□□ 1.15
CUEDC1-201ENST00000360238 HAND1O96004 215 aa22.26■■□□□ 1.15
CUEDC1-201ENST00000360238 IGKV1-39P01597 117 aa22.26■■□□□ 1.15
CUEDC1-201ENST00000360238 IGKV1D-39P04432 117 aa22.26■■□□□ 1.15
CUEDC1-201ENST00000360238 MPV17P39210 176 aa22.26■■□□□ 1.15
CUEDC1-201ENST00000360238 TMEM217Q8N7C4 229 aa22.26■■□□□ 1.15
CUEDC1-201ENST00000360238 SLC35B3Q9H1N7 401 aa22.26■■□□□ 1.15
CUEDC1-201ENST00000360238 DFFBO76075 338 aa22.26■■□□□ 1.15
CUEDC1-201ENST00000360238 GRPP07492 148 aa22.26■■□□□ 1.15
CUEDC1-201ENST00000360238 KIR2DL2P43627 348 aaPredicted RBP22.26■■□□□ 1.15
CUEDC1-201ENST00000360238 SRSF6Q13247 344 aaKnown RBP22.26■■□□□ 1.15
CUEDC1-201ENST00000360238 KCNS2Q9ULS6 477 aa22.26■■□□□ 1.15
CUEDC1-201ENST00000360238 RBM7Q9Y580 266 aaKnown RBP22.26■■□□□ 1.15
CUEDC1-201ENST00000360238 WSB1Q9Y6I7 421 aa22.26■■□□□ 1.15
CUEDC1-201ENST00000360238 H0YL77 283 aa22.25■■□□□ 1.15
CUEDC1-201ENST00000360238 TXNL1O43396 289 aa22.25■■□□□ 1.15
CUEDC1-201ENST00000360238 TUBG1P23258 451 aa22.25■■□□□ 1.15
CUEDC1-201ENST00000360238 SULT1A1P50225 295 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms