RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 DHHO43323 396 aa7.11□□□□□ -1.27
CDC42SE1-201ENST00000357235 IGHV3-9P01782 118 aa7.11□□□□□ -1.27
CDC42SE1-201ENST00000357235 B4GALT1P15291 398 aa7.11□□□□□ -1.27
CDC42SE1-201ENST00000357235 UCP3P55916 312 aa7.11□□□□□ -1.27
CDC42SE1-201ENST00000357235 RPS18P62269 152 aaKnown RBP7.11□□□□□ -1.27
CDC42SE1-201ENST00000357235 RPL23AP62750 156 aaKnown RBP7.11□□□□□ -1.27
CDC42SE1-201ENST00000357235 UBE2V1Q13404 147 aa7.11□□□□□ -1.27
CDC42SE1-201ENST00000357235 ZNF266Q14584 549 aa7.11□□□□□ -1.27
CDC42SE1-201ENST00000357235 SHBQ15464 509 aa7.11□□□□□ -1.27
CDC42SE1-201ENST00000357235 RSPO1Q2MKA7 263 aaPredicted RBP7.11□□□□□ -1.27
CDC42SE1-201ENST00000357235 OR2M3Q8NG83 312 aa7.11□□□□□ -1.27
CDC42SE1-201ENST00000357235 SSC4DQ8WTU2 575 aa7.11□□□□□ -1.27
CDC42SE1-201ENST00000357235 ORAOV1Q8WV07 137 aa7.11□□□□□ -1.27
CDC42SE1-201ENST00000357235 DNASE2BQ8WZ79 361 aa7.11□□□□□ -1.27
CDC42SE1-201ENST00000357235 RASL10BQ96S79 203 aa7.11□□□□□ -1.27
CDC42SE1-201ENST00000357235 C20orf144Q9BQM9 153 aa7.11□□□□□ -1.27
CDC42SE1-201ENST00000357235 TM2D1Q9BX74 207 aa7.11□□□□□ -1.27
CDC42SE1-201ENST00000357235 CSTL1Q9H114 145 aa7.11□□□□□ -1.27
CDC42SE1-201ENST00000357235 PLSCR2Q9NRY7 297 aa7.11□□□□□ -1.27
CDC42SE1-201ENST00000357235 GNG13Q9P2W3 67 aa7.11□□□□□ -1.27
CDC42SE1-201ENST00000357235 IGSF23A1L1A6 192 aa7.1□□□□□ -1.27
CDC42SE1-201ENST00000357235 FOXI3A8MTJ6 420 aaPredicted RBP7.1□□□□□ -1.27
CDC42SE1-201ENST00000357235 ADAM20O43506 726 aa7.1□□□□□ -1.27
CDC42SE1-201ENST00000357235 GDF9O60383 454 aa7.1□□□□□ -1.27
CDC42SE1-201ENST00000357235 PIAS2O75928 621 aa7.1□□□□□ -1.27
CDC42SE1-201ENST00000357235 NRASP01111 189 aa7.1□□□□□ -1.27
CDC42SE1-201ENST00000357235 HLA-HP01893 362 aa7.1□□□□□ -1.27
CDC42SE1-201ENST00000357235 BMI1P35226 326 aa7.1□□□□□ -1.27
CDC42SE1-201ENST00000357235 RAB11AP62491 216 aa7.1□□□□□ -1.27
CDC42SE1-201ENST00000357235 RANP62826 216 aaKnown RBP7.1□□□□□ -1.27
CDC42SE1-201ENST00000357235 IL13RA2Q14627 380 aa7.1□□□□□ -1.27
CDC42SE1-201ENST00000357235 TMEM241Q24JQ0 296 aa7.1□□□□□ -1.27
CDC42SE1-201ENST00000357235 PLCXD3Q63HM9 321 aa7.1□□□□□ -1.27
CDC42SE1-201ENST00000357235 NFAM1Q8NET5 270 aaPredicted RBP7.1□□□□□ -1.27
CDC42SE1-201ENST00000357235 TMEM171Q8WVE6 324 aa7.1□□□□□ -1.27
CDC42SE1-201ENST00000357235 MSI2Q96DH6 328 aaKnown RBP7.1□□□□□ -1.27
CDC42SE1-201ENST00000357235 SDSLQ96GA7 329 aa7.1□□□□□ -1.27
CDC42SE1-201ENST00000357235 BOD1Q96IK1 185 aa7.1□□□□□ -1.27
CDC42SE1-201ENST00000357235 ZNF576Q9H609 170 aa7.1□□□□□ -1.27
CDC42SE1-201ENST00000357235 RNF150Q9ULK6 438 aa7.1□□□□□ -1.27
CDC42SE1-201ENST00000357235 ZNF407Q9C0G0 2248 aa7.1□□□□□ -1.27
CDC42SE1-201ENST00000357235 C3orf85A0A1B0GTC6 90 aa7.1□□□□□ -1.27
CDC42SE1-201ENST00000357235 TNFSF11O14788 317 aa7.1□□□□□ -1.27
CDC42SE1-201ENST00000357235 TNFSF13O75888 250 aa7.1□□□□□ -1.27
CDC42SE1-201ENST00000357235 HSPB1P04792 205 aaKnown RBP7.1□□□□□ -1.27
CDC42SE1-201ENST00000357235 TDGF1P13385 188 aa7.1□□□□□ -1.27
CDC42SE1-201ENST00000357235 WNT5AP41221 380 aa7.1□□□□□ -1.27
CDC42SE1-201ENST00000357235 PDLIM4P50479 330 aa7.1□□□□□ -1.27
CDC42SE1-201ENST00000357235 HIST1H3AP68431 136 aa7.1□□□□□ -1.27
CDC42SE1-201ENST00000357235 MALLQ13021 153 aa7.1□□□□□ -1.27
CDC42SE1-201ENST00000357235 ZNF154Q13106 437 aa7.1□□□□□ -1.27
CDC42SE1-201ENST00000357235 CMTM1Q8IZ96 169 aa7.1□□□□□ -1.27
CDC42SE1-201ENST00000357235 OSR2Q8N2R0 312 aa7.1□□□□□ -1.27
CDC42SE1-201ENST00000357235 DEFB123Q8N688 67 aa7.1□□□□□ -1.27
CDC42SE1-201ENST00000357235 AGBL5Q8NDL9 886 aa7.1□□□□□ -1.27
CDC42SE1-201ENST00000357235 TMEM37Q8WXS4 190 aa7.1□□□□□ -1.27
CDC42SE1-201ENST00000357235 SPACA9Q96E40 222 aaPredicted RBP7.1□□□□□ -1.27
CDC42SE1-201ENST00000357235 MS4A10Q96PG2 267 aa7.1□□□□□ -1.27
CDC42SE1-201ENST00000357235 AURKAIP1Q9NWT8 199 aaPredicted RBP7.1□□□□□ -1.27
CDC42SE1-201ENST00000357235 KIAA1456Q9P272 454 aa7.1□□□□□ -1.27
CDC42SE1-201ENST00000357235 ADAMTS9Q9P2N4 1935 aa7.1□□□□□ -1.27
CDC42SE1-201ENST00000357235 IGKV1-12A0A0C4DH73 117 aa7.09□□□□□ -1.27
CDC42SE1-201ENST00000357235 A0A1W2PR77 199 aa7.09□□□□□ -1.27
CDC42SE1-201ENST00000357235 SHISA7A6NL88 538 aa7.09□□□□□ -1.27
CDC42SE1-201ENST00000357235 K7N7A8 449 aa7.09□□□□□ -1.27
CDC42SE1-201ENST00000357235 PPYP01298 95 aa7.09□□□□□ -1.27
CDC42SE1-201ENST00000357235 IGKV1D-12P01611 117 aa7.09□□□□□ -1.27
CDC42SE1-201ENST00000357235 TUBG1P23258 451 aa7.09□□□□□ -1.27
CDC42SE1-201ENST00000357235 PTGDSP41222 190 aa7.09□□□□□ -1.27
CDC42SE1-201ENST00000357235 DYNLT3P51808 116 aa7.09□□□□□ -1.27
CDC42SE1-201ENST00000357235 PNRC1Q12796 327 aaPredicted RBP7.09□□□□□ -1.27
CDC42SE1-201ENST00000357235 RAB30Q15771 203 aa7.09□□□□□ -1.27
CDC42SE1-201ENST00000357235 IZUMO4Q1ZYL8 232 aa7.09□□□□□ -1.27
CDC42SE1-201ENST00000357235 C9orf135Q5VTT2 229 aa7.09□□□□□ -1.27
CDC42SE1-201ENST00000357235 RHBDD2Q6NTF9 364 aa7.09□□□□□ -1.27
CDC42SE1-201ENST00000357235 KMT5CQ86Y97 462 aa7.09□□□□□ -1.27
CDC42SE1-201ENST00000357235 CCDC71LQ8N9Z2 235 aa7.09□□□□□ -1.27
CDC42SE1-201ENST00000357235 OR4C5Q8NGB2 326 aa7.09□□□□□ -1.27
CDC42SE1-201ENST00000357235 CIB3Q96Q77 187 aaPredicted RBP7.09□□□□□ -1.27
CDC42SE1-201ENST00000357235 SLC7A10Q9NS82 523 aa7.09□□□□□ -1.27
CDC42SE1-201ENST00000357235 A0A1B0GU03 582 aa7.09□□□□□ -1.27
CDC42SE1-201ENST00000357235 MPPED1O15442 326 aa7.09□□□□□ -1.27
CDC42SE1-201ENST00000357235 GLB1P16278 677 aa7.09□□□□□ -1.27
CDC42SE1-201ENST00000357235 TCN2P20062 427 aa7.09□□□□□ -1.27
CDC42SE1-201ENST00000357235 IGFBP4P22692 258 aa7.09□□□□□ -1.27
CDC42SE1-201ENST00000357235 RPL19P84098 196 aaKnown RBP7.09□□□□□ -1.27
CDC42SE1-201ENST00000357235 CNN3Q15417 329 aaKnown RBP7.09□□□□□ -1.27
CDC42SE1-201ENST00000357235 CLEC12BQ2HXU8 276 aa7.09□□□□□ -1.27
CDC42SE1-201ENST00000357235 MPV17LQ2QL34 196 aa7.09□□□□□ -1.27
CDC42SE1-201ENST00000357235 LCN15Q6UWW0 184 aa7.09□□□□□ -1.27
CDC42SE1-201ENST00000357235 TOMM20LQ6UXN7 152 aa7.09□□□□□ -1.27
CDC42SE1-201ENST00000357235 TMPRSS7Q7RTY8 843 aa7.09□□□□□ -1.27
CDC42SE1-201ENST00000357235 TBC1D26Q86UD7 250 aa7.09□□□□□ -1.27
CDC42SE1-201ENST00000357235 SLC25A45Q8N413 288 aa7.09□□□□□ -1.27
CDC42SE1-201ENST00000357235 TMEM252Q8N6L7 170 aa7.09□□□□□ -1.27
CDC42SE1-201ENST00000357235 C18orf12Q96KH6 178 aa7.09□□□□□ -1.27
CDC42SE1-201ENST00000357235 LAMP3Q9UQV4 416 aa7.09□□□□□ -1.27
CDC42SE1-201ENST00000357235 DIDO1Q9BTC0 2240 aaKnown RBP7.09□□□□□ -1.28
CDC42SE1-201ENST00000357235 OR5G3P0C626 314 aa7.09□□□□□ -1.28
CDC42SE1-201ENST00000357235 CD46P15529 392 aa7.09□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms