RNA–Protein interactions for RNA: ENST00000356948.10

PTBP1-203, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTBP1, Length 3,598 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-203ENST00000356948 SGCZQ96LD1 299 aa13.03□□□□□ -0.32
PTBP1-203ENST00000356948 SLC35B3Q9H1N7 401 aa13.03□□□□□ -0.32
PTBP1-203ENST00000356948 ARV1Q9H2C2 271 aa13.03□□□□□ -0.32
PTBP1-203ENST00000356948 DOCK11Q5JSL3 2073 aa13.03□□□□□ -0.32
PTBP1-203ENST00000356948 RAB11AP62491 216 aa13.02□□□□□ -0.32
PTBP1-203ENST00000356948 HMGN3Q15651 99 aa13.02□□□□□ -0.32
PTBP1-203ENST00000356948 OR2C3Q8N628 320 aa13.02□□□□□ -0.32
PTBP1-203ENST00000356948 RBMXL1Q96E39 390 aaKnown RBP13.02□□□□□ -0.32
PTBP1-203ENST00000356948 GINS3Q9BRX5 216 aa13.02□□□□□ -0.32
PTBP1-203ENST00000356948 LOXL2Q9Y4K0 774 aa13.02□□□□□ -0.32
PTBP1-203ENST00000356948 RP1L1Q8IWN7 2480 aaPredicted RBP13.02□□□□□ -0.32
PTBP1-203ENST00000356948 PKIAP61925 76 aa13.02□□□□□ -0.32
PTBP1-203ENST00000356948 VAMP2P63027 116 aa13.02□□□□□ -0.32
PTBP1-203ENST00000356948 NUFIP2Q7Z417 695 aaKnown RBP13.02□□□□□ -0.32
PTBP1-203ENST00000356948 SELENOHQ8IZQ5 122 aaKnown RBP13.02□□□□□ -0.32
PTBP1-203ENST00000356948 OR2G3Q8NGZ4 309 aa13.02□□□□□ -0.32
PTBP1-203ENST00000356948 NIPSNAP3BQ9BS92 247 aa13.02□□□□□ -0.32
PTBP1-203ENST00000356948 PLEKHA2Q9HB19 425 aa13.02□□□□□ -0.32
PTBP1-203ENST00000356948 ZFP92A6NM28 416 aa13.02□□□□□ -0.33
PTBP1-203ENST00000356948 GJE1A6NN92 205 aa13.02□□□□□ -0.33
PTBP1-203ENST00000356948 HIST1H1BP16401 226 aaKnown RBP13.02□□□□□ -0.33
PTBP1-203ENST00000356948 Q6ZRM9 215 aa13.02□□□□□ -0.33
PTBP1-203ENST00000356948 ZNF695Q8IW36 515 aa13.02□□□□□ -0.33
PTBP1-203ENST00000356948 C1QTNF5Q9BXJ0 243 aa13.02□□□□□ -0.33
PTBP1-203ENST00000356948 TMEM222Q9H0R3 208 aa13.02□□□□□ -0.33
PTBP1-203ENST00000356948 OR1A1Q9P1Q5 309 aa13.02□□□□□ -0.33
PTBP1-203ENST00000356948 PRSS50Q9UI38 385 aa13.02□□□□□ -0.33
PTBP1-203ENST00000356948 SEC14L6B5MCN3 397 aa13.01□□□□□ -0.33
PTBP1-203ENST00000356948 SOD3P08294 240 aa13.01□□□□□ -0.33
PTBP1-203ENST00000356948 MMP9P14780 707 aa13.01□□□□□ -0.33
PTBP1-203ENST00000356948 HOXA5P20719 270 aa13.01□□□□□ -0.33
PTBP1-203ENST00000356948 DYNLT3P51808 116 aa13.01□□□□□ -0.33
PTBP1-203ENST00000356948 ZNF880Q6PDB4 577 aa13.01□□□□□ -0.33
PTBP1-203ENST00000356948 CBLN4Q9NTU7 201 aa13.01□□□□□ -0.33
PTBP1-203ENST00000356948 LIPGQ9Y5X9 500 aa13.01□□□□□ -0.33
PTBP1-203ENST00000356948 CACNA1GO43497 2377 aa13.01□□□□□ -0.33
PTBP1-203ENST00000356948 CHST1O43916 411 aa13.01□□□□□ -0.33
PTBP1-203ENST00000356948 ARL6IP1Q15041 203 aa13.01□□□□□ -0.33
PTBP1-203ENST00000356948 GPR157Q5UAW9 335 aa13.01□□□□□ -0.33
PTBP1-203ENST00000356948 PLPPR1Q8TBJ4 325 aa13.01□□□□□ -0.33
PTBP1-203ENST00000356948 TNRC6BQ9UPQ9 1833 aaKnown RBP13.01□□□□□ -0.33
PTBP1-203ENST00000356948 TRDCB7Z8K6 153 aa13.01□□□□□ -0.33
PTBP1-203ENST00000356948 PGA5P0DJD9 388 aa13.01□□□□□ -0.33
PTBP1-203ENST00000356948 NKX2-1P43699 371 aaPredicted RBP13.01□□□□□ -0.33
PTBP1-203ENST00000356948 LHX2P50458 406 aa13.01□□□□□ -0.33
PTBP1-203ENST00000356948 RPS23P62266 143 aaKnown RBP13.01□□□□□ -0.33
PTBP1-203ENST00000356948 TMEM267Q0VDI3 215 aaPredicted RBP13.01□□□□□ -0.33
PTBP1-203ENST00000356948 TMEM252Q8N6L7 170 aa13.01□□□□□ -0.33
PTBP1-203ENST00000356948 REPIN1Q9BWE0 567 aaKnown RBP13.01□□□□□ -0.33
PTBP1-203ENST00000356948 Q9N2K0 584 aa13.01□□□□□ -0.33
PTBP1-203ENST00000356948 SIRT7Q9NRC8 400 aa13.01□□□□□ -0.33
PTBP1-203ENST00000356948 RPL36A-HNRNPH2H7BZ11 118 aa13□□□□□ -0.33
PTBP1-203ENST00000356948 TDGF1P13385 188 aa13□□□□□ -0.33
PTBP1-203ENST00000356948 PAX6P26367 422 aa13□□□□□ -0.33
PTBP1-203ENST00000356948 ERVS71-1P61550 626 aa13□□□□□ -0.33
PTBP1-203ENST00000356948 RAB1AP62820 205 aa13□□□□□ -0.33
PTBP1-203ENST00000356948 C11orf1Q9H5F2 150 aa13□□□□□ -0.33
PTBP1-203ENST00000356948 TUBG2Q9NRH3 451 aa13□□□□□ -0.33
PTBP1-203ENST00000356948 POMT1Q9Y6A1 747 aa13□□□□□ -0.33
PTBP1-203ENST00000356948 RELNP78509 3460 aa13□□□□□ -0.33
PTBP1-203ENST00000356948 ICE1Q9Y2F5 2266 aa13□□□□□ -0.33
PTBP1-203ENST00000356948 H3BQ15 152 aa13□□□□□ -0.33
PTBP1-203ENST00000356948 APLNRP35414 380 aa13□□□□□ -0.33
PTBP1-203ENST00000356948 LRTM2Q8N967 370 aa13□□□□□ -0.33
PTBP1-203ENST00000356948 CPNE4Q96A23 557 aaPredicted RBP13□□□□□ -0.33
PTBP1-203ENST00000356948 RAB39BQ96DA2 213 aa13□□□□□ -0.33
PTBP1-203ENST00000356948 C9orf172C9J069 976 aa13□□□□□ -0.33
PTBP1-203ENST00000356948 K7N7A8 449 aa13□□□□□ -0.33
PTBP1-203ENST00000356948 CELA3BP08861 270 aa13□□□□□ -0.33
PTBP1-203ENST00000356948 SEC11BP0C7V7 166 aa13□□□□□ -0.33
PTBP1-203ENST00000356948 RPS16P62249 146 aaKnown RBP13□□□□□ -0.33
PTBP1-203ENST00000356948 DLK1P80370 383 aa13□□□□□ -0.33
PTBP1-203ENST00000356948 DCAF12Q5T6F0 453 aa13□□□□□ -0.33
PTBP1-203ENST00000356948 RTL6Q6ICC9 239 aa13□□□□□ -0.33
PTBP1-203ENST00000356948 ETFRF1Q6IPR1 90 aa13□□□□□ -0.33
PTBP1-203ENST00000356948 SPSB3Q6PJ21 355 aa13□□□□□ -0.33
PTBP1-203ENST00000356948 ZNF295-AS1Q8N0V1 137 aa13□□□□□ -0.33
PTBP1-203ENST00000356948 OR1K1Q8NGR3 316 aa13□□□□□ -0.33
PTBP1-203ENST00000356948 DTD1Q8TEA8 209 aa13□□□□□ -0.33
PTBP1-203ENST00000356948 TMEM37Q8WXS4 190 aa13□□□□□ -0.33
PTBP1-203ENST00000356948 VSIRQ9H7M9 311 aa13□□□□□ -0.33
PTBP1-203ENST00000356948 USF3Q68DE3 2245 aa12.99□□□□□ -0.33
PTBP1-203ENST00000356948 TRGC1P0CF51 173 aa12.99□□□□□ -0.33
PTBP1-203ENST00000356948 CA6P23280 308 aa12.99□□□□□ -0.33
PTBP1-203ENST00000356948 WNT5AP41221 380 aa12.99□□□□□ -0.33
PTBP1-203ENST00000356948 CEBPDP49716 269 aaPredicted RBP12.99□□□□□ -0.33
PTBP1-203ENST00000356948 CLDN18P56856 261 aa12.99□□□□□ -0.33
PTBP1-203ENST00000356948 SPCS3P61009 180 aa12.99□□□□□ -0.33
PTBP1-203ENST00000356948 GNMTQ14749 295 aa12.99□□□□□ -0.33
PTBP1-203ENST00000356948 ALKBH6Q3KRA9 238 aa12.99□□□□□ -0.33
PTBP1-203ENST00000356948 KCNE4Q8WWG9 221 aa12.99□□□□□ -0.33
PTBP1-203ENST00000356948 SYT3Q9BQG1 590 aa12.99□□□□□ -0.33
PTBP1-203ENST00000356948 TAAR3PQ9P1P4 343 aa12.99□□□□□ -0.33
PTBP1-203ENST00000356948 OR14J1Q9UGF5 321 aa12.99□□□□□ -0.33
PTBP1-203ENST00000356948 CBY1Q9Y3M2 126 aa12.99□□□□□ -0.33
PTBP1-203ENST00000356948 IGHV2-5P01817 119 aa12.99□□□□□ -0.33
PTBP1-203ENST00000356948 ECI1P42126 302 aa12.99□□□□□ -0.33
PTBP1-203ENST00000356948 TMEM211Q6ICI0 200 aa12.99□□□□□ -0.33
PTBP1-203ENST00000356948 PCSK4Q6UW60 755 aa12.99□□□□□ -0.33
PTBP1-203ENST00000356948 MRPL21Q7Z2W9 205 aaKnown RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 122.3 ms