RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 GAGE10A6NGK3 116 aa13.03□□□□□ -0.32
LMX1B-201ENST00000355497 ZNF735P0CB33 412 aa13.03□□□□□ -0.32
LMX1B-201ENST00000355497 TRIP6Q15654 476 aaKnown RBP13.03□□□□□ -0.32
LMX1B-201ENST00000355497 HES3Q5TGS1 186 aa13.03□□□□□ -0.32
LMX1B-201ENST00000355497 RHBDD2Q6NTF9 364 aa13.03□□□□□ -0.32
LMX1B-201ENST00000355497 ZNF519Q8TB69 540 aa13.03□□□□□ -0.32
LMX1B-201ENST00000355497 ADAMTS17Q8TE56 1095 aa13.03□□□□□ -0.32
LMX1B-201ENST00000355497 COL25A1Q9BXS0 654 aaPredicted RBP13.03□□□□□ -0.32
LMX1B-201ENST00000355497 FLRT3Q9NZU0 649 aa13.03□□□□□ -0.32
LMX1B-201ENST00000355497 CROCCQ5TZA2 2017 aa13.03□□□□□ -0.32
LMX1B-201ENST00000355497 LINC00862A6NCI5 91 aa13.03□□□□□ -0.32
LMX1B-201ENST00000355497 J3QR06 171 aa13.03□□□□□ -0.32
LMX1B-201ENST00000355497 CISD3P0C7P0 127 aa13.03□□□□□ -0.32
LMX1B-201ENST00000355497 PTPMT1Q8WUK0 201 aaPredicted RBP13.03□□□□□ -0.32
LMX1B-201ENST00000355497 P2RX4Q99571 388 aa13.03□□□□□ -0.32
LMX1B-201ENST00000355497 AURKAIP1Q9NWT8 199 aaPredicted RBP13.03□□□□□ -0.32
LMX1B-201ENST00000355497 CTGFP29279 349 aa13.03□□□□□ -0.32
LMX1B-201ENST00000355497 LGALSLQ3ZCW2 172 aaPredicted RBP13.03□□□□□ -0.32
LMX1B-201ENST00000355497 SOSTQ9BQB4 213 aa13.03□□□□□ -0.32
LMX1B-201ENST00000355497 IL19Q9UHD0 177 aa13.03□□□□□ -0.32
LMX1B-201ENST00000355497 ZNF345Q14585 488 aa13.03□□□□□ -0.32
LMX1B-201ENST00000355497 MRAP2Q96G30 205 aa13.03□□□□□ -0.32
LMX1B-201ENST00000355497 RASL10BQ96S79 203 aa13.03□□□□□ -0.32
LMX1B-201ENST00000355497 IGHV3-21A0A0B4J1V1 117 aa13.02□□□□□ -0.32
LMX1B-201ENST00000355497 IGHV1OR15-9A0A0B4J2B8 117 aa13.02□□□□□ -0.32
LMX1B-201ENST00000355497 CA11O75493 328 aa13.02□□□□□ -0.32
LMX1B-201ENST00000355497 EML2O95834 649 aa13.02□□□□□ -0.32
LMX1B-201ENST00000355497 GHITMQ9H3K2 345 aa13.02□□□□□ -0.32
LMX1B-201ENST00000355497 CLN8Q9UBY8 286 aa13.02□□□□□ -0.32
LMX1B-201ENST00000355497 CELA2BP08218 269 aaPredicted RBP13.02□□□□□ -0.32
LMX1B-201ENST00000355497 MAS1LP35410 378 aa13.02□□□□□ -0.32
LMX1B-201ENST00000355497 C9orf50Q5SZB4 431 aa13.02□□□□□ -0.32
LMX1B-201ENST00000355497 REC114Q7Z4M0 266 aa13.02□□□□□ -0.32
LMX1B-201ENST00000355497 SYT8Q8NBV8 401 aa13.02□□□□□ -0.32
LMX1B-201ENST00000355497 MIXL1Q9H2W2 232 aa13.02□□□□□ -0.32
LMX1B-201ENST00000355497 TSPAN13O95857 204 aa13.02□□□□□ -0.33
LMX1B-201ENST00000355497 LRRC3BQ96PB8 259 aa13.02□□□□□ -0.33
LMX1B-201ENST00000355497 BTF3P20290 206 aaKnown RBP13.02□□□□□ -0.33
LMX1B-201ENST00000355497 ATP6V0CP27449 155 aa13.02□□□□□ -0.33
LMX1B-201ENST00000355497 MMDQ15546 238 aa13.02□□□□□ -0.33
LMX1B-201ENST00000355497 RBM38Q9H0Z9 239 aaKnown RBP13.02□□□□□ -0.33
LMX1B-201ENST00000355497 HYPMO75409 117 aa13.01□□□□□ -0.33
LMX1B-201ENST00000355497 HERPUD1Q15011 391 aa13.01□□□□□ -0.33
LMX1B-201ENST00000355497 CCDC144NLQ6NUI1 221 aa13.01□□□□□ -0.33
LMX1B-201ENST00000355497 PNLIPP16233 465 aa13.01□□□□□ -0.33
LMX1B-201ENST00000355497 LOXL3P58215 753 aa13.01□□□□□ -0.33
LMX1B-201ENST00000355497 HMGCLL1Q8TB92 370 aa13.01□□□□□ -0.33
LMX1B-201ENST00000355497 MOB4Q9Y3A3 225 aa13.01□□□□□ -0.33
LMX1B-201ENST00000355497 AESQ08117 197 aa13.01□□□□□ -0.33
LMX1B-201ENST00000355497 NSUN5P2Q63ZY6 315 aa13.01□□□□□ -0.33
LMX1B-201ENST00000355497 H1FOOQ8IZA3 346 aaPredicted RBP13.01□□□□□ -0.33
LMX1B-201ENST00000355497 PGLYRP3Q96LB9 341 aa13.01□□□□□ -0.33
LMX1B-201ENST00000355497 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.01□□□□□ -0.33
LMX1B-201ENST00000355497 TNFSF14O43557 240 aa13.01□□□□□ -0.33
LMX1B-201ENST00000355497 HIKESHIQ53FT3 197 aa13.01□□□□□ -0.33
LMX1B-201ENST00000355497 RNFT1Q5M7Z0 435 aa13.01□□□□□ -0.33
LMX1B-201ENST00000355497 ZNF784Q8NCA9 323 aaPredicted RBP13.01□□□□□ -0.33
LMX1B-201ENST00000355497 ASB5Q8WWX0 329 aa13.01□□□□□ -0.33
LMX1B-201ENST00000355497 COL10A1Q03692 680 aa13.01□□□□□ -0.33
LMX1B-201ENST00000355497 TEX30Q5JUR7 227 aa13.01□□□□□ -0.33
LMX1B-201ENST00000355497 CALHM1Q8IU99 346 aa13.01□□□□□ -0.33
LMX1B-201ENST00000355497 SPOCK3Q9BQ16 436 aa13.01□□□□□ -0.33
LMX1B-201ENST00000355497 FER1L6Q2WGJ9 1857 aa13□□□□□ -0.33
LMX1B-201ENST00000355497 COL9A1P20849 921 aa13□□□□□ -0.33
LMX1B-201ENST00000355497 CD300CQ08708 224 aa13□□□□□ -0.33
LMX1B-201ENST00000355497 SPATA45Q537H7 98 aa13□□□□□ -0.33
LMX1B-201ENST00000355497 C1QL3Q5VWW1 255 aa13□□□□□ -0.33
LMX1B-201ENST00000355497 EBLN2Q6P2I7 272 aa13□□□□□ -0.33
LMX1B-201ENST00000355497 HOGA1Q86XE5 327 aa13□□□□□ -0.33
LMX1B-201ENST00000355497 OR2Y1Q8NGV0 311 aa13□□□□□ -0.33
LMX1B-201ENST00000355497 BCL2P10415 239 aa13□□□□□ -0.33
LMX1B-201ENST00000355497 ZNF250P15622 560 aa13□□□□□ -0.33
LMX1B-201ENST00000355497 CLPPQ16740 277 aaPredicted RBP13□□□□□ -0.33
LMX1B-201ENST00000355497 ZNF738Q8NE65 137 aa13□□□□□ -0.33
LMX1B-201ENST00000355497 COX14Q96I36 57 aa13□□□□□ -0.33
LMX1B-201ENST00000355497 CHST5Q9GZS9 411 aa13□□□□□ -0.33
LMX1B-201ENST00000355497 SLC25A10Q9UBX3 287 aaPredicted RBP13□□□□□ -0.33
LMX1B-201ENST00000355497 BGLAPP02818 100 aa13□□□□□ -0.33
LMX1B-201ENST00000355497 VSIG8P0DPA2 414 aa13□□□□□ -0.33
LMX1B-201ENST00000355497 OR10J6PQ8NGY7 276 aa13□□□□□ -0.33
LMX1B-201ENST00000355497 MS4A7Q9GZW8 240 aaPredicted RBP13□□□□□ -0.33
LMX1B-201ENST00000355497 MS4A5Q9H3V2 200 aa13□□□□□ -0.33
LMX1B-201ENST00000355497 KBTBD11O94819 623 aa13□□□□□ -0.33
LMX1B-201ENST00000355497 HPRT1P00492 218 aa13□□□□□ -0.33
LMX1B-201ENST00000355497 INO80CQ6PI98 192 aaPredicted RBP13□□□□□ -0.33
LMX1B-201ENST00000355497 TMEM92Q6UXU6 159 aa13□□□□□ -0.33
LMX1B-201ENST00000355497 TNFSF18Q9UNG2 199 aa13□□□□□ -0.33
LMX1B-201ENST00000355497 RGPD1P0DJD0 1748 aa13□□□□□ -0.33
LMX1B-201ENST00000355497 MFAP2P55001 183 aa13□□□□□ -0.33
LMX1B-201ENST00000355497 C1orf210Q8IVY1 113 aa13□□□□□ -0.33
LMX1B-201ENST00000355497 OR4C45A6NMZ5 311 aa12.99□□□□□ -0.33
LMX1B-201ENST00000355497 NPIPB6E9PJ23 425 aa12.99□□□□□ -0.33
LMX1B-201ENST00000355497 TMEM78Q5T7P6 136 aa12.99□□□□□ -0.33
LMX1B-201ENST00000355497 SGMS2Q8NHU3 365 aa12.99□□□□□ -0.33
LMX1B-201ENST00000355497 RNF133Q8WVZ7 376 aa12.99□□□□□ -0.33
LMX1B-201ENST00000355497 FAM60AQ9NP50 221 aa12.99□□□□□ -0.33
LMX1B-201ENST00000355497 MRPS16Q9Y3D3 137 aaKnown RBP12.99□□□□□ -0.33
LMX1B-201ENST00000355497 TRAV39A0A0B4J263 110 aa12.99□□□□□ -0.33
LMX1B-201ENST00000355497 SS18L1O75177 396 aaPredicted RBP12.99□□□□□ -0.33
LMX1B-201ENST00000355497 CYB5R3P00387 301 aaPredicted RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms