RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 ANAPC16Q96DE5 110 aa6.57□□□□□ -1.36
BRCA1-201ENST00000352993 RNF150Q9ULK6 438 aa6.57□□□□□ -1.36
BRCA1-201ENST00000352993 TRAV1-1A0A0B4J248 108 aa6.57□□□□□ -1.36
BRCA1-201ENST00000352993 PAGE4O60829 102 aa6.57□□□□□ -1.36
BRCA1-201ENST00000352993 CRYAAP02489 173 aa6.57□□□□□ -1.36
BRCA1-201ENST00000352993 TCN2P20062 427 aa6.57□□□□□ -1.36
BRCA1-201ENST00000352993 IL3RAP26951 378 aa6.57□□□□□ -1.36
BRCA1-201ENST00000352993 RANP62826 216 aaKnown RBP6.57□□□□□ -1.36
BRCA1-201ENST00000352993 C17orf67Q0P5P2 114 aa6.57□□□□□ -1.36
BRCA1-201ENST00000352993 LEMD1Q68G75 181 aa6.57□□□□□ -1.36
BRCA1-201ENST00000352993 GJC3Q8NFK1 279 aa6.57□□□□□ -1.36
BRCA1-201ENST00000352993 TECTBQ96PL2 329 aa6.57□□□□□ -1.36
BRCA1-201ENST00000352993 TMEM106BQ9NUM4 274 aa6.57□□□□□ -1.36
BRCA1-201ENST00000352993 VCANP13611 3396 aa6.57□□□□□ -1.36
BRCA1-201ENST00000352993 TCRBV21S2A2A0A5A6 115 aa6.57□□□□□ -1.36
BRCA1-201ENST00000352993 LILRA1O75019 489 aa6.57□□□□□ -1.36
BRCA1-201ENST00000352993 TNFSF13O75888 250 aa6.57□□□□□ -1.36
BRCA1-201ENST00000352993 ID3Q02535 119 aa6.57□□□□□ -1.36
BRCA1-201ENST00000352993 CNN3Q15417 329 aaKnown RBP6.57□□□□□ -1.36
BRCA1-201ENST00000352993 NUFIP2Q7Z417 695 aaKnown RBP6.57□□□□□ -1.36
BRCA1-201ENST00000352993 MCEMP1Q8IX19 187 aa6.57□□□□□ -1.36
BRCA1-201ENST00000352993 CPEB3Q8NE35 698 aaKnown RBP6.57□□□□□ -1.36
BRCA1-201ENST00000352993 IMMP2LQ96T52 175 aa6.57□□□□□ -1.36
BRCA1-201ENST00000352993 WNT5BQ9H1J7 359 aa6.57□□□□□ -1.36
BRCA1-201ENST00000352993 RNF24Q9Y225 148 aa6.57□□□□□ -1.36
BRCA1-201ENST00000352993 ZFP30Q9Y2G7 519 aa6.57□□□□□ -1.36
BRCA1-201ENST00000352993 LNP1A1A4G5 178 aa6.56□□□□□ -1.36
BRCA1-201ENST00000352993 IGKV3-11P04433 115 aa6.56□□□□□ -1.36
BRCA1-201ENST00000352993 UMODP07911 640 aa6.56□□□□□ -1.36
BRCA1-201ENST00000352993 COL9A1P20849 921 aa6.56□□□□□ -1.36
BRCA1-201ENST00000352993 S100A7P31151 101 aa6.56□□□□□ -1.36
BRCA1-201ENST00000352993 PDLIM4P50479 330 aa6.56□□□□□ -1.36
BRCA1-201ENST00000352993 SNAI3Q3KNW1 292 aa6.56□□□□□ -1.36
BRCA1-201ENST00000352993 Q6ZN92 141 aa6.56□□□□□ -1.36
BRCA1-201ENST00000352993 SPPL3Q8TCT6 385 aa6.56□□□□□ -1.36
BRCA1-201ENST00000352993 IL1F10Q8WWZ1 152 aa6.56□□□□□ -1.36
BRCA1-201ENST00000352993 DNASE2BQ8WZ79 361 aa6.56□□□□□ -1.36
BRCA1-201ENST00000352993 ST8SIA1Q92185 356 aa6.56□□□□□ -1.36
BRCA1-201ENST00000352993 SPTSSAQ969W0 71 aa6.56□□□□□ -1.36
BRCA1-201ENST00000352993 SLC35E1Q96K37 410 aa6.56□□□□□ -1.36
BRCA1-201ENST00000352993 MRGPRX4Q96LA9 322 aa6.56□□□□□ -1.36
BRCA1-201ENST00000352993 SGCZQ96LD1 299 aa6.56□□□□□ -1.36
BRCA1-201ENST00000352993 VPS25Q9BRG1 176 aa6.56□□□□□ -1.36
BRCA1-201ENST00000352993 RPP25Q9BUL9 199 aaKnown RBP6.56□□□□□ -1.36
BRCA1-201ENST00000352993 METTL7AQ9H8H3 244 aa6.56□□□□□ -1.36
BRCA1-201ENST00000352993 B3GAT1Q9P2W7 334 aa6.56□□□□□ -1.36
BRCA1-201ENST00000352993 CACNG5Q9UF02 275 aa6.56□□□□□ -1.36
BRCA1-201ENST00000352993 ZNF407Q9C0G0 2248 aa6.56□□□□□ -1.36
BRCA1-201ENST00000352993 SCTP09683 121 aa6.56□□□□□ -1.36
BRCA1-201ENST00000352993 OR5G3P0C626 314 aa6.56□□□□□ -1.36
BRCA1-201ENST00000352993 MSR1P21757 451 aa6.56□□□□□ -1.36
BRCA1-201ENST00000352993 CDKN1AP38936 164 aa6.56□□□□□ -1.36
BRCA1-201ENST00000352993 HNRNPA3P51991 378 aaKnown RBP6.56□□□□□ -1.36
BRCA1-201ENST00000352993 SUMO1P63165 101 aaKnown RBP6.56□□□□□ -1.36
BRCA1-201ENST00000352993 EIF3IQ13347 325 aaKnown RBP6.56□□□□□ -1.36
BRCA1-201ENST00000352993 ZNF468Q5VIY5 522 aaPredicted RBP6.56□□□□□ -1.36
BRCA1-201ENST00000352993 PLCXD3Q63HM9 321 aa6.56□□□□□ -1.36
BRCA1-201ENST00000352993 DTX1Q86Y01 620 aa6.56□□□□□ -1.36
BRCA1-201ENST00000352993 ODF3L1Q8IXM7 274 aa6.56□□□□□ -1.36
BRCA1-201ENST00000352993 OR5AU1Q8NGC0 362 aa6.56□□□□□ -1.36
BRCA1-201ENST00000352993 OR10V1Q8NGI7 309 aa6.56□□□□□ -1.36
BRCA1-201ENST00000352993 SGMS2Q8NHU3 365 aa6.56□□□□□ -1.36
BRCA1-201ENST00000352993 OIT3Q8WWZ8 545 aa6.56□□□□□ -1.36
BRCA1-201ENST00000352993 GUCD1Q96NT3 240 aa6.56□□□□□ -1.36
BRCA1-201ENST00000352993 OR4C12Q96R67 309 aa6.56□□□□□ -1.36
BRCA1-201ENST00000352993 PYGO2Q9BRQ0 406 aa6.56□□□□□ -1.36
BRCA1-201ENST00000352993 MRPL13Q9BYD1 178 aaKnown RBP6.56□□□□□ -1.36
BRCA1-201ENST00000352993 IGFLR1Q9H665 355 aa6.56□□□□□ -1.36
BRCA1-201ENST00000352993 ADAMTS9Q9P2N4 1935 aa6.56□□□□□ -1.36
BRCA1-201ENST00000352993 IGHV5-51A0A0C4DH38 117 aa6.56□□□□□ -1.36
BRCA1-201ENST00000352993 C1QTNF9BB2RNN3 333 aa6.56□□□□□ -1.36
BRCA1-201ENST00000352993 ETV2O00321 342 aaPredicted RBP6.56□□□□□ -1.36
BRCA1-201ENST00000352993 PDCD6O75340 191 aa6.56□□□□□ -1.36
BRCA1-201ENST00000352993 CLDN1O95832 211 aa6.56□□□□□ -1.36
BRCA1-201ENST00000352993 SERPINA7P05543 415 aa6.56□□□□□ -1.36
BRCA1-201ENST00000352993 CCL1P22362 96 aa6.56□□□□□ -1.36
BRCA1-201ENST00000352993 SRP14P37108 136 aaKnown RBP6.56□□□□□ -1.36
BRCA1-201ENST00000352993 FAM69BQ5VUD6 431 aa6.56□□□□□ -1.36
BRCA1-201ENST00000352993 Q6ZVH6 145 aa6.56□□□□□ -1.36
BRCA1-201ENST00000352993 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.56□□□□□ -1.36
BRCA1-201ENST00000352993 PLPPR1Q8TBJ4 325 aa6.56□□□□□ -1.36
BRCA1-201ENST00000352993 MBD3L1Q8WWY6 194 aa6.56□□□□□ -1.36
BRCA1-201ENST00000352993 PINX1Q96BK5 328 aaKnown RBP6.56□□□□□ -1.36
BRCA1-201ENST00000352993 GPR146Q96CH1 333 aa6.56□□□□□ -1.36
BRCA1-201ENST00000352993 SIGLEC12Q96PQ1 595 aa6.56□□□□□ -1.36
BRCA1-201ENST00000352993 RAB40CQ96S21 281 aa6.56□□□□□ -1.36
BRCA1-201ENST00000352993 PLA2G2FQ9BZM2 168 aa6.56□□□□□ -1.36
BRCA1-201ENST00000352993 OR51B6Q9H340 312 aa6.56□□□□□ -1.36
BRCA1-201ENST00000352993 PNRC2Q9NPJ4 139 aaKnown RBP6.56□□□□□ -1.36
BRCA1-201ENST00000352993 TMEM131Q92545 1883 aa6.55□□□□□ -1.36
BRCA1-201ENST00000352993 IGHV3-15A0A0B4J1V0 119 aa6.55□□□□□ -1.36
BRCA1-201ENST00000352993 MDFIC2A0A1B0GVS7 189 aa6.55□□□□□ -1.36
BRCA1-201ENST00000352993 SYNGR2O43760 224 aa6.55□□□□□ -1.36
BRCA1-201ENST00000352993 RBMXL2O75526 392 aaKnown RBP6.55□□□□□ -1.36
BRCA1-201ENST00000352993 NRASP01111 189 aa6.55□□□□□ -1.36
BRCA1-201ENST00000352993 IL6RP08887 468 aaPredicted RBP6.55□□□□□ -1.36
BRCA1-201ENST00000352993 CRISP2P16562 243 aa6.55□□□□□ -1.36
BRCA1-201ENST00000352993 FBLP22087 321 aaKnown RBP6.55□□□□□ -1.36
BRCA1-201ENST00000352993 ADMP35318 185 aa6.55□□□□□ -1.36
BRCA1-201ENST00000352993 PAX9P55771 341 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms