RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 LRRC10Q5BKY1 277 aa9.18□□□□□ -0.94
CAPN3-203ENST00000349748 RAET1LQ5VY80 246 aa9.18□□□□□ -0.94
CAPN3-203ENST00000349748 KCTD18Q6PI47 426 aaPredicted RBP9.18□□□□□ -0.94
CAPN3-203ENST00000349748 KLHDC1Q8N7A1 406 aa9.18□□□□□ -0.94
CAPN3-203ENST00000349748 TCTEX1D1Q8N7M0 179 aa9.18□□□□□ -0.94
CAPN3-203ENST00000349748 FER1L6-AS1Q8NA97 138 aa9.18□□□□□ -0.94
CAPN3-203ENST00000349748 OR51T1Q8NGJ9 327 aa9.18□□□□□ -0.94
CAPN3-203ENST00000349748 MRPL30Q8TCC3 161 aaKnown RBP9.18□□□□□ -0.94
CAPN3-203ENST00000349748 MSI2Q96DH6 328 aaKnown RBP9.18□□□□□ -0.94
CAPN3-203ENST00000349748 PILRBQ9UKJ0 227 aa9.18□□□□□ -0.94
CAPN3-203ENST00000349748 C19orf53Q9UNZ5 99 aaPredicted RBP9.18□□□□□ -0.94
CAPN3-203ENST00000349748 CACNA1IQ9P0X4 2223 aa9.18□□□□□ -0.94
CAPN3-203ENST00000349748 ARHGAP21Q5T5U3 1957 aa9.17□□□□□ -0.94
CAPN3-203ENST00000349748 FAM166BA8MTA8 275 aa9.17□□□□□ -0.94
CAPN3-203ENST00000349748 ADH1BP00325 375 aa9.17□□□□□ -0.94
CAPN3-203ENST00000349748 MC5RP33032 325 aa9.17□□□□□ -0.94
CAPN3-203ENST00000349748 SMAGPQ0VAQ4 97 aa9.17□□□□□ -0.94
CAPN3-203ENST00000349748 NNATQ16517 81 aa9.17□□□□□ -0.94
CAPN3-203ENST00000349748 PARS2Q7L3T8 475 aaKnown RBP9.17□□□□□ -0.94
CAPN3-203ENST00000349748 TMEM144Q7Z5S9 345 aa9.17□□□□□ -0.94
CAPN3-203ENST00000349748 MUC15Q8N387 334 aa9.17□□□□□ -0.94
CAPN3-203ENST00000349748 SGMS2Q8NHU3 365 aa9.17□□□□□ -0.94
CAPN3-203ENST00000349748 CPT1CQ8TCG5 803 aa9.17□□□□□ -0.94
CAPN3-203ENST00000349748 DOCK11Q5JSL3 2073 aa9.17□□□□□ -0.94
CAPN3-203ENST00000349748 TRAV8-6A0A0B4J262 113 aa9.17□□□□□ -0.94
CAPN3-203ENST00000349748 BLACEA4D250 179 aa9.17□□□□□ -0.94
CAPN3-203ENST00000349748 DPRXA6NFQ7 191 aa9.17□□□□□ -0.94
CAPN3-203ENST00000349748 HS3ST1O14792 307 aa9.17□□□□□ -0.94
CAPN3-203ENST00000349748 CT62P0C5K7 136 aa9.17□□□□□ -0.94
CAPN3-203ENST00000349748 FRMD6-AS1P0C7T7 363 aa9.17□□□□□ -0.94
CAPN3-203ENST00000349748 BLVRBP30043 206 aaPredicted RBP9.17□□□□□ -0.94
CAPN3-203ENST00000349748 AMTP48728 403 aa9.17□□□□□ -0.94
CAPN3-203ENST00000349748 PRDX1Q06830 199 aaKnown RBP9.17□□□□□ -0.94
CAPN3-203ENST00000349748 CNN3Q15417 329 aaKnown RBP9.17□□□□□ -0.94
CAPN3-203ENST00000349748 ABHD12BQ7Z5M8 362 aaPredicted RBP9.17□□□□□ -0.94
CAPN3-203ENST00000349748 CDRT4Q8N9R6 151 aa9.17□□□□□ -0.94
CAPN3-203ENST00000349748 OR10W1Q8NGF6 305 aa9.17□□□□□ -0.94
CAPN3-203ENST00000349748 OR4F5Q8NH21 305 aa9.17□□□□□ -0.94
CAPN3-203ENST00000349748 NEUROG1Q92886 237 aa9.17□□□□□ -0.94
CAPN3-203ENST00000349748 LRRC3BQ96PB8 259 aa9.17□□□□□ -0.94
CAPN3-203ENST00000349748 NUDT16L1Q9BRJ7 211 aaKnown RBP9.17□□□□□ -0.94
CAPN3-203ENST00000349748 REPIN1Q9BWE0 567 aaKnown RBP9.17□□□□□ -0.94
CAPN3-203ENST00000349748 GTSF1LQ9H1H1 148 aa9.17□□□□□ -0.94
CAPN3-203ENST00000349748 ZNF286AQ9HBT8 521 aa9.17□□□□□ -0.94
CAPN3-203ENST00000349748 CENPMQ9NSP4 180 aa9.17□□□□□ -0.94
CAPN3-203ENST00000349748 CDC42EP3Q9UKI2 254 aa9.17□□□□□ -0.94
CAPN3-203ENST00000349748 MCTS1Q9ULC4 181 aaKnown RBP9.17□□□□□ -0.94
CAPN3-203ENST00000349748 WASHC3Q9Y3C0 194 aa9.17□□□□□ -0.94
CAPN3-203ENST00000349748 A0A1B0GV72 72 aa9.16□□□□□ -0.94
CAPN3-203ENST00000349748 PGPEP1LA6NFU8 196 aa9.16□□□□□ -0.94
CAPN3-203ENST00000349748 SERINC4A6NH21 518 aa9.16□□□□□ -0.94
CAPN3-203ENST00000349748 C1QTNF9BB2RNN3 333 aa9.16□□□□□ -0.94
CAPN3-203ENST00000349748 TRAF3IP2O43734 574 aaPredicted RBP9.16□□□□□ -0.94
CAPN3-203ENST00000349748 SRSF10O75494 262 aaKnown RBP9.16□□□□□ -0.94
CAPN3-203ENST00000349748 C3orf79P0CE67 100 aa9.16□□□□□ -0.94
CAPN3-203ENST00000349748 ZNF728P0DKX0 622 aa9.16□□□□□ -0.94
CAPN3-203ENST00000349748 ESDP10768 282 aa9.16□□□□□ -0.94
CAPN3-203ENST00000349748 ERGP11308 486 aa9.16□□□□□ -0.94
CAPN3-203ENST00000349748 CTLA4P16410 223 aa9.16□□□□□ -0.94
CAPN3-203ENST00000349748 EGR1P18146 543 aa9.16□□□□□ -0.94
CAPN3-203ENST00000349748 CRYBA4P53673 196 aa9.16□□□□□ -0.94
CAPN3-203ENST00000349748 RRADP55042 308 aa9.16□□□□□ -0.94
CAPN3-203ENST00000349748 FHL5Q5TD97 284 aa9.16□□□□□ -0.94
CAPN3-203ENST00000349748 FAM71F2Q6NXP2 309 aa9.16□□□□□ -0.94
CAPN3-203ENST00000349748 HAPLN4Q86UW8 402 aa9.16□□□□□ -0.94
CAPN3-203ENST00000349748 OR1B1Q8NGR6 318 aa9.16□□□□□ -0.94
CAPN3-203ENST00000349748 OR2A1Q8NGT9 310 aa9.16□□□□□ -0.94
CAPN3-203ENST00000349748 OR52N5Q8NH56 324 aa9.16□□□□□ -0.94
CAPN3-203ENST00000349748 FAM71F1Q96KD3 344 aaPredicted RBP9.16□□□□□ -0.94
CAPN3-203ENST00000349748 FREM3P0C091 2139 aa9.16□□□□□ -0.94
CAPN3-203ENST00000349748 PPIAL4EA0A075B759 164 aa9.16□□□□□ -0.94
CAPN3-203ENST00000349748 PPIAL4CA0A0B4J2A2 164 aa9.16□□□□□ -0.94
CAPN3-203ENST00000349748 PPIAL4DF5H284 164 aa9.16□□□□□ -0.94
CAPN3-203ENST00000349748 ZNF253O75346 499 aa9.16□□□□□ -0.94
CAPN3-203ENST00000349748 PPIAL4FP0DN26 164 aa9.16□□□□□ -0.94
CAPN3-203ENST00000349748 RAB11FIP5Q9BXF6 653 aa9.16□□□□□ -0.94
CAPN3-203ENST00000349748 MMP25Q9NPA2 562 aa9.16□□□□□ -0.94
CAPN3-203ENST00000349748 CLEC1BQ9P126 229 aa9.16□□□□□ -0.94
CAPN3-203ENST00000349748 ABI3Q9P2A4 366 aa9.16□□□□□ -0.94
CAPN3-203ENST00000349748 SMPXQ9UHP9 88 aa9.16□□□□□ -0.94
CAPN3-203ENST00000349748 RARRES3Q9UL19 164 aa9.16□□□□□ -0.94
CAPN3-203ENST00000349748 MMP17Q9ULZ9 603 aa9.16□□□□□ -0.94
CAPN3-203ENST00000349748 MUC21A0A0G2JKD1 596 aa9.15□□□□□ -0.94
CAPN3-203ENST00000349748 MUC21A0A140T8X8 626 aa9.15□□□□□ -0.94
CAPN3-203ENST00000349748 TTRP02766 147 aa9.15□□□□□ -0.94
CAPN3-203ENST00000349748 C1QTNF9P0C862 333 aa9.15□□□□□ -0.94
CAPN3-203ENST00000349748 PSG4Q00888 419 aa9.15□□□□□ -0.94
CAPN3-203ENST00000349748 C17orf67Q0P5P2 114 aa9.15□□□□□ -0.94
CAPN3-203ENST00000349748 SPIN3Q5JUX0 258 aa9.15□□□□□ -0.94
CAPN3-203ENST00000349748 MUC21Q5SSG8 566 aa9.15□□□□□ -0.94
CAPN3-203ENST00000349748 C5orf17Q8NAS9 161 aa9.15□□□□□ -0.94
CAPN3-203ENST00000349748 MRPL18Q9H0U6 180 aaKnown RBP9.15□□□□□ -0.94
CAPN3-203ENST00000349748 OR10A2Q9H208 303 aa9.15□□□□□ -0.94
CAPN3-203ENST00000349748 PNO1Q9NRX1 252 aaKnown RBP9.15□□□□□ -0.94
CAPN3-203ENST00000349748 ERRFI1Q9UJM3 462 aaPredicted RBP9.15□□□□□ -0.94
CAPN3-203ENST00000349748 STAG3L3P0CL85 134 aa9.15□□□□□ -0.94
CAPN3-203ENST00000349748 AZU1P20160 251 aa9.15□□□□□ -0.94
CAPN3-203ENST00000349748 OPRM1P35372 400 aa9.15□□□□□ -0.94
CAPN3-203ENST00000349748 RAB9AP51151 201 aa9.15□□□□□ -0.94
CAPN3-203ENST00000349748 CLDN15P56746 228 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms