RNA–Protein interactions for RNA: ENST00000345662.5

SPAST-202, Transcript of spastin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPAST, Length 5,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-202ENST00000345662 RAB29O14966 203 aa15.25■□□□□ 0.03
SPAST-202ENST00000345662 ORM2P19652 201 aa15.25■□□□□ 0.03
SPAST-202ENST00000345662 RAC3P60763 192 aa15.25■□□□□ 0.03
SPAST-202ENST00000345662 RIGQ13278 110 aa15.25■□□□□ 0.03
SPAST-202ENST00000345662 MYOZ1Q9NP98 299 aaPredicted RBP15.25■□□□□ 0.03
SPAST-202ENST00000345662 GAGE10A6NGK3 116 aa15.25■□□□□ 0.03
SPAST-202ENST00000345662 NDUFB4O95168 129 aa15.25■□□□□ 0.03
SPAST-202ENST00000345662 IL2RAP01589 272 aa15.25■□□□□ 0.03
SPAST-202ENST00000345662 SMIM17P0DL12 118 aa15.25■□□□□ 0.03
SPAST-202ENST00000345662 GABRA6Q16445 453 aa15.25■□□□□ 0.03
SPAST-202ENST00000345662 SF3B5Q9BWJ5 86 aaKnown RBP15.25■□□□□ 0.03
SPAST-202ENST00000345662 ADAM11O75078 769 aa15.24■□□□□ 0.03
SPAST-202ENST00000345662 DXOO77932 396 aaKnown RBP15.24■□□□□ 0.03
SPAST-202ENST00000345662 MPLP40238 635 aa15.24■□□□□ 0.03
SPAST-202ENST00000345662 LBX1P52954 281 aa15.24■□□□□ 0.03
SPAST-202ENST00000345662 C12orf54Q6X4T0 127 aa15.24■□□□□ 0.03
SPAST-202ENST00000345662 SH3BGRL3Q9H299 93 aa15.24■□□□□ 0.03
SPAST-202ENST00000345662 ATP23Q9Y6H3 246 aa15.24■□□□□ 0.03
SPAST-202ENST00000345662 MOSPD3O75425 235 aa15.24■□□□□ 0.03
SPAST-202ENST00000345662 COL8A1P27658 744 aa15.24■□□□□ 0.03
SPAST-202ENST00000345662 POC1AQ8NBT0 407 aa15.24■□□□□ 0.03
SPAST-202ENST00000345662 CCDC88CQ9P219 2028 aa15.24■□□□□ 0.03
SPAST-202ENST00000345662 LHX8Q68G74 356 aa15.24■□□□□ 0.03
SPAST-202ENST00000345662 ZADH2Q8N4Q0 377 aa15.24■□□□□ 0.03
SPAST-202ENST00000345662 CA11O75493 328 aa15.24■□□□□ 0.03
SPAST-202ENST00000345662 MYF5P13349 255 aa15.24■□□□□ 0.03
SPAST-202ENST00000345662 SRD5A2P31213 254 aa15.24■□□□□ 0.03
SPAST-202ENST00000345662 RBM11P57052 281 aaKnown RBP15.24■□□□□ 0.03
SPAST-202ENST00000345662 ALKBH6Q3KRA9 238 aa15.24■□□□□ 0.03
SPAST-202ENST00000345662 TEPPQ6URK8 271 aa15.24■□□□□ 0.03
SPAST-202ENST00000345662 CARFQ8N187 725 aa15.24■□□□□ 0.03
SPAST-202ENST00000345662 TIMD4Q96H15 378 aa15.24■□□□□ 0.03
SPAST-202ENST00000345662 IL19Q9UHD0 177 aa15.24■□□□□ 0.03
SPAST-202ENST00000345662 PTPRFP10586 1907 aa15.23■□□□□ 0.03
SPAST-202ENST00000345662 GLI3P10071 1580 aa15.23■□□□□ 0.03
SPAST-202ENST00000345662 CKAP5Q14008 2032 aa15.23■□□□□ 0.03
SPAST-202ENST00000345662 FHITP49789 147 aa15.23■□□□□ 0.03
SPAST-202ENST00000345662 ZNF766Q5HY98 468 aa15.23■□□□□ 0.03
SPAST-202ENST00000345662 KIAA1217Q5T5P2 1943 aa15.23■□□□□ 0.03
SPAST-202ENST00000345662 A0A0G2JK05 382 aa15.23■□□□□ 0.03
SPAST-202ENST00000345662 H0Y980 276 aa15.23■□□□□ 0.03
SPAST-202ENST00000345662 GLULP15104 373 aa15.23■□□□□ 0.03
SPAST-202ENST00000345662 ZNF785A8K8V0 405 aa15.23■□□□□ 0.03
SPAST-202ENST00000345662 PEBP1P30086 187 aaKnown RBP15.23■□□□□ 0.03
SPAST-202ENST00000345662 MFAP2P55001 183 aa15.23■□□□□ 0.03
SPAST-202ENST00000345662 DOCK1Q14185 1865 aa15.23■□□□□ 0.03
SPAST-202ENST00000345662 IGHV1OR21-1A0A087WYE8 117 aa15.23■□□□□ 0.03
SPAST-202ENST00000345662 SPRY3O43610 288 aa15.23■□□□□ 0.03
SPAST-202ENST00000345662 CXorf66Q5JRM2 361 aaPredicted RBP15.23■□□□□ 0.03
SPAST-202ENST00000345662 STRCQ7RTU9 1775 aa15.23■□□□□ 0.03
SPAST-202ENST00000345662 KISS1RQ969F8 398 aaPredicted RBP15.23■□□□□ 0.03
SPAST-202ENST00000345662 CLN8Q9UBY8 286 aa15.23■□□□□ 0.03
SPAST-202ENST00000345662 ZP4Q12836 540 aa15.22■□□□□ 0.03
SPAST-202ENST00000345662 FDX2Q6P4F2 183 aa15.22■□□□□ 0.03
SPAST-202ENST00000345662 TMEM116Q8NCL8 245 aa15.22■□□□□ 0.03
SPAST-202ENST00000345662 LRRC29Q8WV35 223 aa15.22■□□□□ 0.03
SPAST-202ENST00000345662 LHX9Q9NQ69 397 aa15.22■□□□□ 0.03
SPAST-202ENST00000345662 SCN4AP35499 1836 aa15.22■□□□□ 0.03
SPAST-202ENST00000345662 SOD3P08294 240 aa15.22■□□□□ 0.03
SPAST-202ENST00000345662 CD1BP29016 333 aa15.22■□□□□ 0.03
SPAST-202ENST00000345662 HIKESHIQ53FT3 197 aa15.22■□□□□ 0.03
SPAST-202ENST00000345662 LINC00596Q86U02 117 aa15.22■□□□□ 0.03
SPAST-202ENST00000345662 NUDT16L1Q9BRJ7 211 aaKnown RBP15.22■□□□□ 0.03
SPAST-202ENST00000345662 WIPI2Q9Y4P8 454 aa15.22■□□□□ 0.03
SPAST-202ENST00000345662 A0A0U1RQV5 110 aa15.22■□□□□ 0.03
SPAST-202ENST00000345662 TEX30Q5JUR7 227 aa15.22■□□□□ 0.03
SPAST-202ENST00000345662 CYB5R2Q6BCY4 276 aa15.22■□□□□ 0.03
SPAST-202ENST00000345662 MOB3BQ86TA1 216 aa15.22■□□□□ 0.03
SPAST-202ENST00000345662 OR4C12Q96R67 309 aa15.22■□□□□ 0.03
SPAST-202ENST00000345662 AGAP20933 346 aa15.22■□□□□ 0.03
SPAST-202ENST00000345662 CCL7P80098 99 aa15.22■□□□□ 0.03
SPAST-202ENST00000345662 C5orf17Q8NAS9 161 aa15.22■□□□□ 0.03
SPAST-202ENST00000345662 MRPL18Q9H0U6 180 aaKnown RBP15.22■□□□□ 0.03
SPAST-202ENST00000345662 RNF224P0DH78 156 aa15.21■□□□□ 0.03
SPAST-202ENST00000345662 ZNF708P17019 499 aa15.21■□□□□ 0.03
SPAST-202ENST00000345662 RPS11P62280 158 aaKnown RBP eCLIP15.21■□□□□ 0.03
SPAST-202ENST00000345662 OR1B1Q8NGR6 318 aa15.21■□□□□ 0.03
SPAST-202ENST00000345662 SEBOXQ9HB31 216 aaPredicted RBP15.21■□□□□ 0.03
SPAST-202ENST00000345662 KIAA0100Q14667 2235 aaKnown RBP15.21■□□□□ 0.03
SPAST-202ENST00000345662 CELA2BP08218 269 aaPredicted RBP15.21■□□□□ 0.03
SPAST-202ENST00000345662 MELTFP08582 738 aa15.21■□□□□ 0.03
SPAST-202ENST00000345662 GLRX5Q86SX6 157 aa15.21■□□□□ 0.03
SPAST-202ENST00000345662 OR8A1Q8NGG7 326 aa15.21■□□□□ 0.03
SPAST-202ENST00000345662 OR2H1Q9GZK4 316 aa15.21■□□□□ 0.03
SPAST-202ENST00000345662 HLA-DQA1P01909 254 aa15.21■□□□□ 0.03
SPAST-202ENST00000345662 HOXA5P20719 270 aa15.21■□□□□ 0.03
SPAST-202ENST00000345662 C2orf68Q2NKX9 166 aa15.21■□□□□ 0.03
SPAST-202ENST00000345662 SLC23A3Q6PIS1 610 aa15.21■□□□□ 0.03
SPAST-202ENST00000345662 OR52M1Q8NGK5 317 aa15.21■□□□□ 0.03
SPAST-202ENST00000345662 TAF15Q92804 592 aaKnown RBP eCLIP15.21■□□□□ 0.03
SPAST-202ENST00000345662 SARGQ9BW04 601 aa15.21■□□□□ 0.03
SPAST-202ENST00000345662 TMEM38BQ9NVV0 291 aa15.21■□□□□ 0.03
SPAST-202ENST00000345662 IGKV1-8A0A0C4DH67 115 aa15.21■□□□□ 0.02
SPAST-202ENST00000345662 ERGP11308 486 aa15.21■□□□□ 0.02
SPAST-202ENST00000345662 BTCP35070 178 aa15.21■□□□□ 0.02
SPAST-202ENST00000345662 SAP30LQ9HAJ7 183 aa15.21■□□□□ 0.02
SPAST-202ENST00000345662 J3QT63 122 aa15.2■□□□□ 0.02
SPAST-202ENST00000345662 CA2P00918 260 aa15.2■□□□□ 0.02
SPAST-202ENST00000345662 NPY1RP25929 384 aa15.2■□□□□ 0.02
SPAST-202ENST00000345662 MRPS11P82912 194 aaKnown RBP15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms