RNA–Protein interactions for RNA: ENST00000341594.9

SYNE1-201, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SYNE1, Length 26,584 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-201ENST00000341594 CXorf67Q86X51 503 aaPredicted RBP3.12□□□□□ -1.91
SYNE1-201ENST00000341594 TSLPQ969D9 159 aa3.12□□□□□ -1.91
SYNE1-201ENST00000341594 OR52D1Q9H346 318 aa3.12□□□□□ -1.91
SYNE1-201ENST00000341594 PELI2Q9HAT8 420 aa3.12□□□□□ -1.91
SYNE1-201ENST00000341594 MMACHCQ9Y4U1 282 aa3.12□□□□□ -1.91
SYNE1-201ENST00000341594 TSPAN13O95857 204 aa3.12□□□□□ -1.91
SYNE1-201ENST00000341594 ACSM6Q6P461 480 aa3.12□□□□□ -1.91
SYNE1-201ENST00000341594 GPR132Q9UNW8 380 aa3.12□□□□□ -1.91
SYNE1-201ENST00000341594 MBLAC1A4D2B0 266 aaPredicted RBP3.12□□□□□ -1.91
SYNE1-201ENST00000341594 SH2D7A6NKC9 451 aaPredicted RBP3.12□□□□□ -1.91
SYNE1-201ENST00000341594 TYMSP04818 313 aa3.12□□□□□ -1.91
SYNE1-201ENST00000341594 APODP05090 189 aa3.12□□□□□ -1.91
SYNE1-201ENST00000341594 NGFRP08138 427 aa3.12□□□□□ -1.91
SYNE1-201ENST00000341594 SMAGPQ0VAQ4 97 aa3.12□□□□□ -1.91
SYNE1-201ENST00000341594 SBSNQ6UWP8 590 aa3.12□□□□□ -1.91
SYNE1-201ENST00000341594 YIPF1Q9Y548 306 aa3.12□□□□□ -1.91
SYNE1-201ENST00000341594 COL27A1Q8IZC6 1860 aaPredicted RBP3.12□□□□□ -1.91
SYNE1-201ENST00000341594 IGLV3-27P01718 113 aa3.12□□□□□ -1.91
SYNE1-201ENST00000341594 RNFT1Q5M7Z0 435 aa3.12□□□□□ -1.91
SYNE1-201ENST00000341594 LANCL3Q6ZV70 420 aa3.12□□□□□ -1.91
SYNE1-201ENST00000341594 OR4D11Q8NGI4 311 aa3.12□□□□□ -1.91
SYNE1-201ENST00000341594 LY96Q9Y6Y9 160 aa3.12□□□□□ -1.91
SYNE1-201ENST00000341594 IGHV3OR16-8A0A075B7F1 116 aa3.12□□□□□ -1.91
SYNE1-201ENST00000341594 ZFP92A6NM28 416 aa3.12□□□□□ -1.91
SYNE1-201ENST00000341594 MPDU1O75352 247 aa3.12□□□□□ -1.91
SYNE1-201ENST00000341594 MYBPHQ13203 477 aa3.12□□□□□ -1.91
SYNE1-201ENST00000341594 MS4A13Q5J8X5 152 aa3.12□□□□□ -1.91
SYNE1-201ENST00000341594 ZNF66Q6ZN08 573 aa3.12□□□□□ -1.91
SYNE1-201ENST00000341594 FADS6Q8N9I5 356 aa3.12□□□□□ -1.91
SYNE1-201ENST00000341594 AQP3Q92482 292 aa3.12□□□□□ -1.91
SYNE1-201ENST00000341594 SDHCQ99643 169 aaPredicted RBP3.12□□□□□ -1.91
SYNE1-201ENST00000341594 HDHD3Q9BSH5 251 aaPredicted RBP3.12□□□□□ -1.91
SYNE1-201ENST00000341594 KCNE1BA0A087WTH5 132 aa3.12□□□□□ -1.91
SYNE1-201ENST00000341594 C1orf226A1L170 272 aa3.12□□□□□ -1.91
SYNE1-201ENST00000341594 C1orf105O95561 183 aa3.12□□□□□ -1.91
SYNE1-201ENST00000341594 ZNF90Q03938 601 aa3.12□□□□□ -1.91
SYNE1-201ENST00000341594 MORN2Q502X0 79 aa3.12□□□□□ -1.91
SYNE1-201ENST00000341594 RCC1LQ96I51 464 aaKnown RBP3.12□□□□□ -1.91
SYNE1-201ENST00000341594 FBXL17Q9UF56 701 aa3.12□□□□□ -1.91
SYNE1-201ENST00000341594 V9GYY9 64 aa3.12□□□□□ -1.91
SYNE1-201ENST00000341594 ANKRD17O75179 2603 aaKnown RBP3.12□□□□□ -1.91
SYNE1-201ENST00000341594 GLIPR1P48060 266 aa3.12□□□□□ -1.91
SYNE1-201ENST00000341594 OR10V1Q8NGI7 309 aa3.12□□□□□ -1.91
SYNE1-201ENST00000341594 OR10AC1Q8NH08 325 aa3.12□□□□□ -1.91
SYNE1-201ENST00000341594 PNLIPP16233 465 aa3.12□□□□□ -1.91
SYNE1-201ENST00000341594 PSMB3P49720 205 aa3.12□□□□□ -1.91
SYNE1-201ENST00000341594 HRASLSQ9HDD0 168 aa3.12□□□□□ -1.91
SYNE1-201ENST00000341594 COLCA2A8K830 154 aa3.12□□□□□ -1.91
SYNE1-201ENST00000341594 CLDN1O95832 211 aa3.12□□□□□ -1.91
SYNE1-201ENST00000341594 FCGR2CP31995 323 aa3.12□□□□□ -1.91
SYNE1-201ENST00000341594 MRPS34P82930 218 aaKnown RBP3.12□□□□□ -1.91
SYNE1-201ENST00000341594 LCTLQ6UWM7 567 aa3.12□□□□□ -1.91
SYNE1-201ENST00000341594 RSPO2Q6UXX9 243 aaPredicted RBP3.12□□□□□ -1.91
SYNE1-201ENST00000341594 DEFB127Q9H1M4 99 aa3.12□□□□□ -1.91
SYNE1-201ENST00000341594 ISLRO14498 428 aa3.12□□□□□ -1.91
SYNE1-201ENST00000341594 RND2P52198 227 aa3.12□□□□□ -1.91
SYNE1-201ENST00000341594 CIRBPQ14011 172 aaKnown RBP3.12□□□□□ -1.91
SYNE1-201ENST00000341594 ELAVL1Q15717 326 aaKnown RBP3.12□□□□□ -1.91
SYNE1-201ENST00000341594 OR10A7Q8NGE5 316 aa3.12□□□□□ -1.91
SYNE1-201ENST00000341594 PROB1E7EW31 1015 aa3.11□□□□□ -1.91
SYNE1-201ENST00000341594 FCGR2AP12318 317 aa3.11□□□□□ -1.91
SYNE1-201ENST00000341594 HOXB9P17482 250 aaPredicted RBP3.11□□□□□ -1.91
SYNE1-201ENST00000341594 GDNFP39905 211 aa3.11□□□□□ -1.91
SYNE1-201ENST00000341594 GNB1P62873 340 aa3.11□□□□□ -1.91
SYNE1-201ENST00000341594 SNX22Q96L94 193 aa3.11□□□□□ -1.91
SYNE1-201ENST00000341594 SLC16A7O60669 478 aa3.11□□□□□ -1.91
SYNE1-201ENST00000341594 CD70P32970 193 aa3.11□□□□□ -1.91
SYNE1-201ENST00000341594 FAM53AQ6NSI3 398 aaPredicted RBP3.11□□□□□ -1.91
SYNE1-201ENST00000341594 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.11□□□□□ -1.91
SYNE1-201ENST00000341594 ANKRD11Q6UB99 2663 aaPredicted RBP3.11□□□□□ -1.91
SYNE1-201ENST00000341594 PLAC1Q9HBJ0 212 aa3.11□□□□□ -1.91
SYNE1-201ENST00000341594 KLK10O43240 276 aa3.11□□□□□ -1.91
SYNE1-201ENST00000341594 CD74P04233 296 aa3.11□□□□□ -1.91
SYNE1-201ENST00000341594 NPPBP16860 134 aa3.11□□□□□ -1.91
SYNE1-201ENST00000341594 TBXA2RP21731 343 aa3.11□□□□□ -1.91
SYNE1-201ENST00000341594 IDSP22304 550 aa3.11□□□□□ -1.91
SYNE1-201ENST00000341594 GPX7Q96SL4 187 aaPredicted RBP3.11□□□□□ -1.91
SYNE1-201ENST00000341594 RBM24Q9BX46 236 aaKnown RBP3.11□□□□□ -1.91
SYNE1-201ENST00000341594 ADGRL4Q9HBW9 690 aa3.11□□□□□ -1.91
SYNE1-201ENST00000341594 ABI3Q9P2A4 366 aa3.11□□□□□ -1.91
SYNE1-201ENST00000341594 A0A1W2PQU0 124 aa3.11□□□□□ -1.91
SYNE1-201ENST00000341594 COL8A1P27658 744 aa3.11□□□□□ -1.91
SYNE1-201ENST00000341594 FAM90A26D6RGX4 464 aa3.11□□□□□ -1.91
SYNE1-201ENST00000341594 IL2RAP01589 272 aa3.11□□□□□ -1.91
SYNE1-201ENST00000341594 FURINP09958 794 aa3.11□□□□□ -1.91
SYNE1-201ENST00000341594 EFNB2P52799 333 aa3.11□□□□□ -1.91
SYNE1-201ENST00000341594 PLPPR1Q8TBJ4 325 aa3.11□□□□□ -1.91
SYNE1-201ENST00000341594 CHST5Q9GZS9 411 aa3.11□□□□□ -1.91
SYNE1-201ENST00000341594 SLC45A2Q9UMX9 530 aa3.11□□□□□ -1.91
SYNE1-201ENST00000341594 SOD3P08294 240 aa3.11□□□□□ -1.91
SYNE1-201ENST00000341594 EMP2P54851 167 aa3.11□□□□□ -1.91
SYNE1-201ENST00000341594 MSMO1Q15800 293 aa3.11□□□□□ -1.91
SYNE1-201ENST00000341594 SLC18B1Q6NT16 456 aa3.11□□□□□ -1.91
SYNE1-201ENST00000341594 OR4C12Q96R67 309 aa3.11□□□□□ -1.91
SYNE1-201ENST00000341594 GPR84Q9NQS5 396 aa3.11□□□□□ -1.91
SYNE1-201ENST00000341594 BMPR1BO00238 502 aa3.11□□□□□ -1.91
SYNE1-201ENST00000341594 ZFPL1O95159 310 aa3.11□□□□□ -1.91
SYNE1-201ENST00000341594 ABHD5Q8WTS1 349 aa3.11□□□□□ -1.91
SYNE1-201ENST00000341594 CSAG2Q9Y5P2 127 aa3.11□□□□□ -1.91
SYNE1-201ENST00000341594 IGHV3OR16-10A0A075B7F0 116 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms