RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 GNG10P50151 68 aa12.33□□□□□ -0.44
UBE3B-201ENST00000340074 LSM3P62310 102 aaKnown RBP12.33□□□□□ -0.44
UBE3B-201ENST00000340074 FAM189A2Q15884 450 aa12.33□□□□□ -0.44
UBE3B-201ENST00000340074 HLA-DRB5Q30154 266 aa12.33□□□□□ -0.44
UBE3B-201ENST00000340074 MOGAT2Q3SYC2 334 aa12.33□□□□□ -0.44
UBE3B-201ENST00000340074 PLAC9Q5JTB6 97 aa12.33□□□□□ -0.44
UBE3B-201ENST00000340074 Q6ZTK2 550 aa12.33□□□□□ -0.44
UBE3B-201ENST00000340074 OR13F1Q8NGS4 319 aa12.33□□□□□ -0.44
UBE3B-201ENST00000340074 OR9G1Q8NH87 305 aa12.33□□□□□ -0.44
UBE3B-201ENST00000340074 SPATA3Q8NHX4 192 aa12.33□□□□□ -0.44
UBE3B-201ENST00000340074 FUNDC2Q9BWH2 189 aa12.33□□□□□ -0.44
UBE3B-201ENST00000340074 PECRQ9BY49 303 aa12.33□□□□□ -0.44
UBE3B-201ENST00000340074 TAF9BQ9HBM6 251 aa12.33□□□□□ -0.44
UBE3B-201ENST00000340074 AK3Q9UIJ7 227 aa12.33□□□□□ -0.44
UBE3B-201ENST00000340074 HSF4Q9ULV5 492 aa12.33□□□□□ -0.44
UBE3B-201ENST00000340074 PSG11Q9UQ72 335 aa12.33□□□□□ -0.44
UBE3B-201ENST00000340074 TENM1Q9UKZ4 2725 aa12.33□□□□□ -0.44
UBE3B-201ENST00000340074 IGHV3-43A0A0B4J1X8 118 aa12.32□□□□□ -0.44
UBE3B-201ENST00000340074 TMEM89A2RUT3 159 aa12.32□□□□□ -0.44
UBE3B-201ENST00000340074 BUB1B-PAK6H3BSN5 160 aa12.32□□□□□ -0.44
UBE3B-201ENST00000340074 J3QR06 171 aa12.32□□□□□ -0.44
UBE3B-201ENST00000340074 F2RL2O00254 374 aa12.32□□□□□ -0.44
UBE3B-201ENST00000340074 SPINT2O43291 252 aa12.32□□□□□ -0.44
UBE3B-201ENST00000340074 GPR137BO60478 399 aa12.32□□□□□ -0.44
UBE3B-201ENST00000340074 NAPSAO96009 420 aa12.32□□□□□ -0.44
UBE3B-201ENST00000340074 HBZP02008 142 aa12.32□□□□□ -0.44
UBE3B-201ENST00000340074 IGHV3-43DP0DP04 118 aa12.32□□□□□ -0.44
UBE3B-201ENST00000340074 HKR1P10072 659 aa12.32□□□□□ -0.44
UBE3B-201ENST00000340074 SNRPBP14678 240 aaKnown RBP12.32□□□□□ -0.44
UBE3B-201ENST00000340074 LOXL3P58215 753 aa12.32□□□□□ -0.44
UBE3B-201ENST00000340074 AANATQ16613 207 aa12.32□□□□□ -0.44
UBE3B-201ENST00000340074 FAM53AQ6NSI3 398 aaPredicted RBP12.32□□□□□ -0.44
UBE3B-201ENST00000340074 TRAT1Q6PIZ9 186 aa12.32□□□□□ -0.44
UBE3B-201ENST00000340074 Q6ZPA2 131 aa12.32□□□□□ -0.44
UBE3B-201ENST00000340074 SLC16A12Q6ZSM3 486 aa12.32□□□□□ -0.44
UBE3B-201ENST00000340074 C5orf24Q7Z6I8 188 aa12.32□□□□□ -0.44
UBE3B-201ENST00000340074 OR52M1Q8NGK5 317 aa12.32□□□□□ -0.44
UBE3B-201ENST00000340074 OR5R1Q8NH85 324 aa12.32□□□□□ -0.44
UBE3B-201ENST00000340074 OR1L1Q8NH94 360 aa12.32□□□□□ -0.44
UBE3B-201ENST00000340074 PIFOQ8TCI5 191 aa12.32□□□□□ -0.44
UBE3B-201ENST00000340074 MRPS26Q9BYN8 205 aaKnown RBP12.32□□□□□ -0.44
UBE3B-201ENST00000340074 CHMP1AQ9HD42 196 aaPredicted RBP12.32□□□□□ -0.44
UBE3B-201ENST00000340074 DPM3Q9P2X0 92 aa12.32□□□□□ -0.44
UBE3B-201ENST00000340074 VGLL3A8MV65 326 aa12.31□□□□□ -0.44
UBE3B-201ENST00000340074 LEUTXA8MZ59 168 aa12.31□□□□□ -0.44
UBE3B-201ENST00000340074 CRYBA1P05813 215 aa12.31□□□□□ -0.44
UBE3B-201ENST00000340074 RAB13P51153 203 aa12.31□□□□□ -0.44
UBE3B-201ENST00000340074 LY6EQ16553 131 aa12.31□□□□□ -0.44
UBE3B-201ENST00000340074 IDNKQ5T6J7 187 aa12.31□□□□□ -0.44
UBE3B-201ENST00000340074 OLFML2AQ68BL7 652 aa12.31□□□□□ -0.44
UBE3B-201ENST00000340074 OR10R2Q8NGX6 335 aa12.31□□□□□ -0.44
UBE3B-201ENST00000340074 SETD6Q8TBK2 473 aa12.31□□□□□ -0.44
UBE3B-201ENST00000340074 LGALS14Q8TCE9 139 aa12.31□□□□□ -0.44
UBE3B-201ENST00000340074 PTX4Q96A99 478 aa12.31□□□□□ -0.44
UBE3B-201ENST00000340074 RAB3CQ96E17 227 aa12.31□□□□□ -0.44
UBE3B-201ENST00000340074 HDHD3Q9BSH5 251 aaPredicted RBP12.31□□□□□ -0.44
UBE3B-201ENST00000340074 MMP28Q9H239 520 aa12.31□□□□□ -0.44
UBE3B-201ENST00000340074 RAB9BQ9NP90 201 aa12.31□□□□□ -0.44
UBE3B-201ENST00000340074 GFOD1Q9NXC2 390 aa12.31□□□□□ -0.44
UBE3B-201ENST00000340074 KCNIP1Q9NZI2 227 aa12.31□□□□□ -0.44
UBE3B-201ENST00000340074 KCNK7Q9Y2U2 307 aa12.31□□□□□ -0.44
UBE3B-201ENST00000340074 DNHD1Q96M86 4753 aa12.3□□□□□ -0.44
UBE3B-201ENST00000340074 A0A1W2PPE3 182 aa12.3□□□□□ -0.44
UBE3B-201ENST00000340074 METTL21EPA6NDL7 271 aa12.3□□□□□ -0.44
UBE3B-201ENST00000340074 RAB27BO00194 218 aa12.3□□□□□ -0.44
UBE3B-201ENST00000340074 ZNF880Q6PDB4 577 aa12.3□□□□□ -0.44
UBE3B-201ENST00000340074 ZNF554Q86TJ5 538 aa12.3□□□□□ -0.44
UBE3B-201ENST00000340074 CREB3L1Q96BA8 519 aa12.3□□□□□ -0.44
UBE3B-201ENST00000340074 ATG5Q9H1Y0 275 aa12.3□□□□□ -0.44
UBE3B-201ENST00000340074 A0A075B6Q4 140 aa12.29□□□□□ -0.44
UBE3B-201ENST00000340074 LY6LH3BQJ8 138 aa12.29□□□□□ -0.44
UBE3B-201ENST00000340074 GNB3P16520 340 aa12.29□□□□□ -0.44
UBE3B-201ENST00000340074 RPS19P39019 145 aaKnown RBP12.29□□□□□ -0.44
UBE3B-201ENST00000340074 CEACAM3P40198 252 aa12.29□□□□□ -0.44
UBE3B-201ENST00000340074 RPL15P61313 204 aaKnown RBP12.29□□□□□ -0.44
UBE3B-201ENST00000340074 RELBQ01201 579 aa12.29□□□□□ -0.44
UBE3B-201ENST00000340074 HMGN3Q15651 99 aa12.29□□□□□ -0.44
UBE3B-201ENST00000340074 TPTE2P1Q5T6R2 138 aa12.29□□□□□ -0.44
UBE3B-201ENST00000340074 OR10V1Q8NGI7 309 aa12.29□□□□□ -0.44
UBE3B-201ENST00000340074 CMSS1Q9BQ75 279 aaKnown RBP12.29□□□□□ -0.44
UBE3B-201ENST00000340074 RIMS4Q9H426 269 aaPredicted RBP12.29□□□□□ -0.44
UBE3B-201ENST00000340074 OR2S2Q9NQN1 319 aa12.29□□□□□ -0.44
UBE3B-201ENST00000340074 ABCB10Q9NRK6 738 aa12.29□□□□□ -0.44
UBE3B-201ENST00000340074 C1RLQ9NZP8 487 aa12.29□□□□□ -0.44
UBE3B-201ENST00000340074 GNG12Q9UBI6 72 aa12.29□□□□□ -0.44
UBE3B-201ENST00000340074 AMMECR1Q9Y4X0 333 aaPredicted RBP12.29□□□□□ -0.44
UBE3B-201ENST00000340074 TRBV6-6A0A0A6YYG2 114 aa12.28□□□□□ -0.44
UBE3B-201ENST00000340074 MFNGO00587 321 aa12.28□□□□□ -0.44
UBE3B-201ENST00000340074 TFAP2AP05549 437 aa12.28□□□□□ -0.44
UBE3B-201ENST00000340074 COMPP49747 757 aaPredicted RBP12.28□□□□□ -0.44
UBE3B-201ENST00000340074 VBP1P61758 197 aa12.28□□□□□ -0.44
UBE3B-201ENST00000340074 NCS1P62166 190 aa12.28□□□□□ -0.44
UBE3B-201ENST00000340074 FOXL1Q12952 345 aa12.28□□□□□ -0.44
UBE3B-201ENST00000340074 TMEM30BQ3MIR4 351 aa12.28□□□□□ -0.44
UBE3B-201ENST00000340074 AWAT1Q58HT5 328 aa12.28□□□□□ -0.44
UBE3B-201ENST00000340074 MOB1BQ7L9L4 216 aa12.28□□□□□ -0.44
UBE3B-201ENST00000340074 OR5H6Q8NGV6 325 aa12.28□□□□□ -0.44
UBE3B-201ENST00000340074 OR10X1Q8NGY0 326 aa12.28□□□□□ -0.44
UBE3B-201ENST00000340074 GALMQ96C23 342 aa12.28□□□□□ -0.44
UBE3B-201ENST00000340074 C12orf4Q9NQ89 552 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms