RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 HOXA3O43365 443 aaPredicted RBP5.37□□□□□ -1.55
CDC42BPA-201ENST00000334218 MMP9P14780 707 aa5.37□□□□□ -1.55
CDC42BPA-201ENST00000334218 WDR31Q8NA23 367 aa5.37□□□□□ -1.55
CDC42BPA-201ENST00000334218 TMEM38AQ9H6F2 299 aa5.37□□□□□ -1.55
CDC42BPA-201ENST00000334218 VWA8A3KMH1 1905 aa5.37□□□□□ -1.55
CDC42BPA-201ENST00000334218 BUD23O43709 281 aaKnown RBP5.37□□□□□ -1.55
CDC42BPA-201ENST00000334218 PRR35P0CG20 571 aa5.37□□□□□ -1.55
CDC42BPA-201ENST00000334218 CPMP14384 443 aa5.37□□□□□ -1.55
CDC42BPA-201ENST00000334218 ZNF141Q15928 474 aa5.37□□□□□ -1.55
CDC42BPA-201ENST00000334218 C1orf194Q5T5A4 169 aa5.37□□□□□ -1.55
CDC42BPA-201ENST00000334218 LRTM2Q8N967 370 aa5.37□□□□□ -1.55
CDC42BPA-201ENST00000334218 ZNF519Q8TB69 540 aa5.37□□□□□ -1.55
CDC42BPA-201ENST00000334218 NT5CQ8TCD5 201 aa5.37□□□□□ -1.55
CDC42BPA-201ENST00000334218 ZNF414Q96IQ9 312 aa5.37□□□□□ -1.55
CDC42BPA-201ENST00000334218 FLVCR1Q9Y5Y0 555 aa5.37□□□□□ -1.55
CDC42BPA-201ENST00000334218 TRAV1-2A0A0B4J238 106 aa5.37□□□□□ -1.55
CDC42BPA-201ENST00000334218 TRAV41A0A0B4J266 112 aa5.37□□□□□ -1.55
CDC42BPA-201ENST00000334218 NDUFB4O95168 129 aa5.37□□□□□ -1.55
CDC42BPA-201ENST00000334218 LPAR6P43657 344 aa5.37□□□□□ -1.55
CDC42BPA-201ENST00000334218 INHBCP55103 352 aa5.37□□□□□ -1.55
CDC42BPA-201ENST00000334218 CLDN19Q8N6F1 224 aa5.37□□□□□ -1.55
CDC42BPA-201ENST00000334218 GATA5Q9BWX5 397 aaPredicted RBP5.37□□□□□ -1.55
CDC42BPA-201ENST00000334218 RPRMQ9NS64 109 aa5.37□□□□□ -1.55
CDC42BPA-201ENST00000334218 CD5LO43866 347 aa5.37□□□□□ -1.55
CDC42BPA-201ENST00000334218 AZU1P20160 251 aa5.37□□□□□ -1.55
CDC42BPA-201ENST00000334218 MALP21145 153 aa5.37□□□□□ -1.55
CDC42BPA-201ENST00000334218 GPR6P46095 362 aaPredicted RBP5.37□□□□□ -1.55
CDC42BPA-201ENST00000334218 LSM10Q969L4 123 aaKnown RBP5.37□□□□□ -1.55
CDC42BPA-201ENST00000334218 A4GALTQ9NPC4 353 aa5.37□□□□□ -1.55
CDC42BPA-201ENST00000334218 TRAV9-2A0A087WT02 112 aa5.37□□□□□ -1.55
CDC42BPA-201ENST00000334218 FNDC10F2Z333 226 aa5.37□□□□□ -1.55
CDC42BPA-201ENST00000334218 CXorf1O96002 111 aa5.37□□□□□ -1.55
CDC42BPA-201ENST00000334218 NGFRP08138 427 aa5.37□□□□□ -1.55
CDC42BPA-201ENST00000334218 EFNB2P52799 333 aa5.37□□□□□ -1.55
CDC42BPA-201ENST00000334218 TMEM86AQ8N2M4 240 aa5.37□□□□□ -1.55
CDC42BPA-201ENST00000334218 Q9N2J8 555 aa5.37□□□□□ -1.55
CDC42BPA-201ENST00000334218 ANKRD36CQ5JPF3 1778 aa5.37□□□□□ -1.55
CDC42BPA-201ENST00000334218 TRAV13-1A0A0B4J241 112 aa5.37□□□□□ -1.55
CDC42BPA-201ENST00000334218 C7orf72A4D263 438 aa5.37□□□□□ -1.55
CDC42BPA-201ENST00000334218 F5H697 171 aa5.37□□□□□ -1.55
CDC42BPA-201ENST00000334218 NRG2O14511 850 aaPredicted RBP5.37□□□□□ -1.55
CDC42BPA-201ENST00000334218 ALOX5APP20292 161 aa5.37□□□□□ -1.55
CDC42BPA-201ENST00000334218 PTGER1P34995 402 aa5.37□□□□□ -1.55
CDC42BPA-201ENST00000334218 RPL31P62899 125 aaKnown RBP5.37□□□□□ -1.55
CDC42BPA-201ENST00000334218 FOXK1P85037 733 aa5.37□□□□□ -1.55
CDC42BPA-201ENST00000334218 HOXC5Q00444 222 aa5.37□□□□□ -1.55
CDC42BPA-201ENST00000334218 KHSRPQ92945 711 aaKnown RBP eCLIP5.37□□□□□ -1.558e-7■■■□□ 18.4
CDC42BPA-201ENST00000334218 TMEM230Q96A57 120 aa5.37□□□□□ -1.55
CDC42BPA-201ENST00000334218 V9GYH0 126 aa5.37□□□□□ -1.55
CDC42BPA-201ENST00000334218 MCRIP1C9JLW8 97 aa5.37□□□□□ -1.55
CDC42BPA-201ENST00000334218 PLPP2O43688 288 aa5.37□□□□□ -1.55
CDC42BPA-201ENST00000334218 SSSCA1O60232 199 aa5.37□□□□□ -1.55
CDC42BPA-201ENST00000334218 CTSCP53634 463 aa5.37□□□□□ -1.55
CDC42BPA-201ENST00000334218 YBEYP58557 167 aaPredicted RBP5.37□□□□□ -1.55
CDC42BPA-201ENST00000334218 ELAVL3Q14576 367 aaKnown RBP5.37□□□□□ -1.55
CDC42BPA-201ENST00000334218 ZNF750Q32MQ0 723 aa5.37□□□□□ -1.55
CDC42BPA-201ENST00000334218 C2orf15Q8WU43 125 aaKnown RBP5.37□□□□□ -1.55
CDC42BPA-201ENST00000334218 RTP4Q96DX8 246 aa5.37□□□□□ -1.55
CDC42BPA-201ENST00000334218 CHST7Q9NS84 486 aa5.37□□□□□ -1.55
CDC42BPA-201ENST00000334218 TMEM30AQ9NV96 361 aa5.37□□□□□ -1.55
CDC42BPA-201ENST00000334218 PSORS1C1Q9UIG5 152 aa5.37□□□□□ -1.55
CDC42BPA-201ENST00000334218 PYYP10082 97 aa5.37□□□□□ -1.55
CDC42BPA-201ENST00000334218 GPX4P36969 197 aaPredicted RBP5.37□□□□□ -1.55
CDC42BPA-201ENST00000334218 ZNF668Q96K58 619 aaPredicted RBP5.37□□□□□ -1.55
CDC42BPA-201ENST00000334218 MMP23AO75900 390 aa5.36□□□□□ -1.55
CDC42BPA-201ENST00000334218 HOXD3P31249 432 aaPredicted RBP5.36□□□□□ -1.55
CDC42BPA-201ENST00000334218 PCBP3P57721 371 aaKnown RBP5.36□□□□□ -1.55
CDC42BPA-201ENST00000334218 LHX8Q68G74 356 aa5.36□□□□□ -1.55
CDC42BPA-201ENST00000334218 C9orf62Q8N4C0 152 aa5.36□□□□□ -1.55
CDC42BPA-201ENST00000334218 C5orf17Q8NAS9 161 aa5.36□□□□□ -1.55
CDC42BPA-201ENST00000334218 B3GAT1Q9P2W7 334 aa5.36□□□□□ -1.55
CDC42BPA-201ENST00000334218 PLXNA4Q9HCM2 1894 aa5.36□□□□□ -1.55
CDC42BPA-201ENST00000334218 VWC2LB2RUY7 222 aa5.36□□□□□ -1.55
CDC42BPA-201ENST00000334218 CTSDP07339 412 aaPredicted RBP5.36□□□□□ -1.55
CDC42BPA-201ENST00000334218 ELNP15502 786 aa5.36□□□□□ -1.55
CDC42BPA-201ENST00000334218 SYNJ2BPP57105 145 aa5.36□□□□□ -1.55
CDC42BPA-201ENST00000334218 GGTLC2Q14390 218 aa5.36□□□□□ -1.55
CDC42BPA-201ENST00000334218 Q499Y3 187 aa5.36□□□□□ -1.55
CDC42BPA-201ENST00000334218 SHISA6Q6ZSJ9 500 aa5.36□□□□□ -1.55
CDC42BPA-201ENST00000334218 TMEM219Q86XT9 240 aa5.36□□□□□ -1.55
CDC42BPA-201ENST00000334218 KIR3DL3Q8N743 410 aa5.36□□□□□ -1.55
CDC42BPA-201ENST00000334218 LRRC75AQ8NAA5 344 aa5.36□□□□□ -1.55
CDC42BPA-201ENST00000334218 OSER1Q9NX31 292 aa5.36□□□□□ -1.55
CDC42BPA-201ENST00000334218 CARHSP1Q9Y2V2 147 aaKnown RBP5.36□□□□□ -1.55
CDC42BPA-201ENST00000334218 HCFC2Q9Y5Z7 792 aa5.36□□□□□ -1.55
CDC42BPA-201ENST00000334218 CER1O95813 267 aa5.36□□□□□ -1.55
CDC42BPA-201ENST00000334218 LGALS2P05162 132 aa5.36□□□□□ -1.55
CDC42BPA-201ENST00000334218 FRG2Q64ET8 278 aa5.36□□□□□ -1.55
CDC42BPA-201ENST00000334218 KREMEN2Q8NCW0 462 aa5.36□□□□□ -1.55
CDC42BPA-201ENST00000334218 TMEM40Q8WWA1 233 aa5.36□□□□□ -1.55
CDC42BPA-201ENST00000334218 FRG2BQ96QU4 278 aa5.36□□□□□ -1.55
CDC42BPA-201ENST00000334218 DAPP1Q9UN19 280 aa5.36□□□□□ -1.55
CDC42BPA-201ENST00000334218 ROBO3Q96MS0 1386 aa5.36□□□□□ -1.55
CDC42BPA-201ENST00000334218 NPIPB6E9PJ23 425 aa5.36□□□□□ -1.55
CDC42BPA-201ENST00000334218 ZP1P60852 638 aa5.36□□□□□ -1.55
CDC42BPA-201ENST00000334218 SRSF2Q01130 221 aaKnown RBP5.36□□□□□ -1.55
CDC42BPA-201ENST00000334218 TMIGD2Q96BF3 282 aa5.36□□□□□ -1.55
CDC42BPA-201ENST00000334218 FAM3DQ96BQ1 224 aa5.36□□□□□ -1.55
CDC42BPA-201ENST00000334218 SLC2A4RGQ9NR83 387 aa5.36□□□□□ -1.55
CDC42BPA-201ENST00000334218 MARCH2Q9P0N8 246 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms