RNA–Protein interactions for RNA: ENST00000328642.11

SYNM-201, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 3,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-201ENST00000328642 C10orf35Q96D05 121 aa13.73□□□□□ -0.21
SYNM-201ENST00000328642 ABHD17AQ96GS6 310 aa13.73□□□□□ -0.21
SYNM-201ENST00000328642 ALX4Q9H161 411 aaPredicted RBP13.73□□□□□ -0.21
SYNM-201ENST00000328642 PNRC2Q9NPJ4 139 aaKnown RBP13.73□□□□□ -0.21
SYNM-201ENST00000328642 LIN7CQ9NUP9 197 aaKnown RBP13.73□□□□□ -0.21
SYNM-201ENST00000328642 TMED3Q9Y3Q3 217 aa13.73□□□□□ -0.21
SYNM-201ENST00000328642 TLN2Q9Y4G6 2542 aa13.73□□□□□ -0.21
SYNM-201ENST00000328642 IGHV1-2P23083 117 aa13.73□□□□□ -0.21
SYNM-201ENST00000328642 ZNRF1Q8ND25 227 aa13.73□□□□□ -0.21
SYNM-201ENST00000328642 OR10Z1Q8NGY1 313 aa13.73□□□□□ -0.21
SYNM-201ENST00000328642 ITLN1Q8WWA0 313 aa13.73□□□□□ -0.21
SYNM-201ENST00000328642 S100PBPQ96BU1 408 aa13.73□□□□□ -0.21
SYNM-201ENST00000328642 S1PR3Q99500 378 aa13.73□□□□□ -0.21
SYNM-201ENST00000328642 FOXD3Q9UJU5 478 aaPredicted RBP13.73□□□□□ -0.21
SYNM-201ENST00000328642 MPV17P39210 176 aa13.72□□□□□ -0.21
SYNM-201ENST00000328642 GLIPR1P48060 266 aa13.72□□□□□ -0.21
SYNM-201ENST00000328642 FAM122CQ6P4D5 195 aa13.72□□□□□ -0.21
SYNM-201ENST00000328642 TMEM108Q6UXF1 575 aa13.72□□□□□ -0.21
SYNM-201ENST00000328642 NECAP1Q8NC96 275 aa13.72□□□□□ -0.21
SYNM-201ENST00000328642 FRZBQ92765 325 aa13.72□□□□□ -0.21
SYNM-201ENST00000328642 LHX4Q969G2 390 aa13.72□□□□□ -0.21
SYNM-201ENST00000328642 SCNM1Q9BWG6 230 aa13.72□□□□□ -0.21
SYNM-201ENST00000328642 RCC2Q9P258 522 aaKnown RBP13.72□□□□□ -0.21
SYNM-201ENST00000328642 COL10A1Q03692 680 aa13.72□□□□□ -0.21
SYNM-201ENST00000328642 PSG7Q13046 419 aa13.72□□□□□ -0.21
SYNM-201ENST00000328642 TMEM211Q6ICI0 200 aa13.72□□□□□ -0.21
SYNM-201ENST00000328642 PRR7Q8TB68 274 aa13.72□□□□□ -0.21
SYNM-201ENST00000328642 MARS2Q96GW9 593 aaKnown RBP13.72□□□□□ -0.21
SYNM-201ENST00000328642 CCL13Q99616 98 aa13.72□□□□□ -0.21
SYNM-201ENST00000328642 CXXC4Q9H2H0 198 aa13.72□□□□□ -0.21
SYNM-201ENST00000328642 UMAD1C9J7I0 102 aa13.72□□□□□ -0.21
SYNM-201ENST00000328642 DYNLT3P51808 116 aa13.72□□□□□ -0.21
SYNM-201ENST00000328642 B3GALT5-AS1P59052 145 aa13.72□□□□□ -0.21
SYNM-201ENST00000328642 RPS23P62266 143 aaKnown RBP13.72□□□□□ -0.21
SYNM-201ENST00000328642 INO80CQ6PI98 192 aaPredicted RBP13.72□□□□□ -0.21
SYNM-201ENST00000328642 HS3ST6Q96QI5 342 aa13.72□□□□□ -0.21
SYNM-201ENST00000328642 FN3KRPQ9HA64 309 aa13.72□□□□□ -0.21
SYNM-201ENST00000328642 WBP1Q96G27 269 aa13.71□□□□□ -0.21
SYNM-201ENST00000328642 PRR33A8MZF0 331 aa13.71□□□□□ -0.21
SYNM-201ENST00000328642 CD74P04233 296 aa13.71□□□□□ -0.21
SYNM-201ENST00000328642 CECR9P0C854 216 aa13.71□□□□□ -0.21
SYNM-201ENST00000328642 RAB4BP61018 213 aa13.71□□□□□ -0.21
SYNM-201ENST00000328642 ADIRFQ15847 76 aa13.71□□□□□ -0.21
SYNM-201ENST00000328642 TP53RKQ96S44 253 aa13.71□□□□□ -0.21
SYNM-201ENST00000328642 FRYLO94915 3013 aa13.71□□□□□ -0.21
SYNM-201ENST00000328642 IFNA1P01562 189 aa13.71□□□□□ -0.22
SYNM-201ENST00000328642 DTYMKP23919 212 aa13.71□□□□□ -0.22
SYNM-201ENST00000328642 COX7A1P24310 79 aa13.71□□□□□ -0.22
SYNM-201ENST00000328642 SSTR5P35346 364 aa13.71□□□□□ -0.22
SYNM-201ENST00000328642 GFRA1P56159 465 aa13.71□□□□□ -0.22
SYNM-201ENST00000328642 KIAA0141Q14154 515 aaPredicted RBP13.71□□□□□ -0.22
SYNM-201ENST00000328642 HIPK2Q9H2X6 1198 aa13.71□□□□□ -0.22
SYNM-201ENST00000328642 OR2W1Q9Y3N9 320 aa13.71□□□□□ -0.22
SYNM-201ENST00000328642 V9GYS6 101 aa13.71□□□□□ -0.22
SYNM-201ENST00000328642 SETD2Q9BYW2 2564 aaPredicted RBP13.7□□□□□ -0.22
SYNM-201ENST00000328642 ALPK3Q96L96 1907 aa13.7□□□□□ -0.22
SYNM-201ENST00000328642 NKX6-3A6NJ46 265 aa13.7□□□□□ -0.22
SYNM-201ENST00000328642 C1orf196B1AJZ1 125 aa13.7□□□□□ -0.22
SYNM-201ENST00000328642 SHOXO15266 292 aa13.7□□□□□ -0.22
SYNM-201ENST00000328642 CST4P01036 141 aa13.7□□□□□ -0.22
SYNM-201ENST00000328642 OR10P1Q8NGE3 313 aa13.7□□□□□ -0.22
SYNM-201ENST00000328642 MBPP02686 304 aaPredicted RBP13.7□□□□□ -0.22
SYNM-201ENST00000328642 TAGLN2P37802 199 aaKnown RBP13.7□□□□□ -0.22
SYNM-201ENST00000328642 ZNF818PQ6ZRF7 136 aa13.7□□□□□ -0.22
SYNM-201ENST00000328642 CBLN2Q8IUK8 224 aa13.7□□□□□ -0.22
SYNM-201ENST00000328642 Q8IYB0 196 aa13.7□□□□□ -0.22
SYNM-201ENST00000328642 CA5BP1Q8WTZ4 195 aa13.7□□□□□ -0.22
SYNM-201ENST00000328642 TRGV10A0A0A0MS01 117 aa13.7□□□□□ -0.22
SYNM-201ENST00000328642 RNASEK-C17orf49H0YIS7 233 aa13.7□□□□□ -0.22
SYNM-201ENST00000328642 HLA-DRB3P79483 266 aa13.7□□□□□ -0.22
SYNM-201ENST00000328642 TLE4Q04727 773 aa13.7□□□□□ -0.22
SYNM-201ENST00000328642 KCNMB1Q16558 191 aa13.7□□□□□ -0.22
SYNM-201ENST00000328642 FAHD2BQ6P2I3 314 aaPredicted RBP13.7□□□□□ -0.22
SYNM-201ENST00000328642 ISOC2Q96AB3 205 aa13.7□□□□□ -0.22
SYNM-201ENST00000328642 FAHD2AQ96GK7 314 aa13.7□□□□□ -0.22
SYNM-201ENST00000328642 REPIN1Q9BWE0 567 aaKnown RBP13.7□□□□□ -0.22
SYNM-201ENST00000328642 PRDM14Q9GZV8 571 aa13.7□□□□□ -0.22
SYNM-201ENST00000328642 OR2A4O95047 310 aa13.69□□□□□ -0.22
SYNM-201ENST00000328642 MPV17LQ2QL34 196 aa13.69□□□□□ -0.22
SYNM-201ENST00000328642 PDZD11Q5EBL8 140 aa13.69□□□□□ -0.22
SYNM-201ENST00000328642 ABLIM2Q6H8Q1 611 aa13.69□□□□□ -0.22
SYNM-201ENST00000328642 OR2A7Q96R45 310 aa13.69□□□□□ -0.22
SYNM-201ENST00000328642 SERTAD4Q9NUC0 356 aa13.69□□□□□ -0.22
SYNM-201ENST00000328642 NDRG3Q9UGV2 375 aa13.69□□□□□ -0.22
SYNM-201ENST00000328642 GYPAP02724 150 aa13.69□□□□□ -0.22
SYNM-201ENST00000328642 OR8U8P0C7N1 319 aa13.69□□□□□ -0.22
SYNM-201ENST00000328642 ZNF735P0CB33 412 aa13.69□□□□□ -0.22
SYNM-201ENST00000328642 NAT1P18440 290 aa13.69□□□□□ -0.22
SYNM-201ENST00000328642 RAB5BP61020 215 aa13.69□□□□□ -0.22
SYNM-201ENST00000328642 POM121L2Q96KW2 1035 aa13.69□□□□□ -0.22
SYNM-201ENST00000328642 TAAR5O14804 337 aa13.69□□□□□ -0.22
SYNM-201ENST00000328642 CYB5R3P00387 301 aaPredicted RBP13.69□□□□□ -0.22
SYNM-201ENST00000328642 VDAC1P21796 283 aa13.69□□□□□ -0.22
SYNM-201ENST00000328642 PRDX2P32119 198 aa13.69□□□□□ -0.22
SYNM-201ENST00000328642 RAB31Q13636 194 aa13.69□□□□□ -0.22
SYNM-201ENST00000328642 VKORC1L1Q8N0U8 176 aa13.69□□□□□ -0.22
SYNM-201ENST00000328642 CLN8Q9UBY8 286 aa13.69□□□□□ -0.22
SYNM-201ENST00000328642 STRAPQ9Y3F4 350 aaKnown RBP13.69□□□□□ -0.22
SYNM-201ENST00000328642 MYO15AQ9UKN7 3530 aa13.68□□□□□ -0.22
SYNM-201ENST00000328642 KITLGP21583 273 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms