RNA–Protein interactions for RNA: ENST00000320857.7

SSR4-201, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSR4, Length 1,671 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-201ENST00000320857 DUX4L5P0CJ88 424 aa14.3□□□□□ -0.12
SSR4-201ENST00000320857 DUX4L6P0CJ89 424 aa14.3□□□□□ -0.12
SSR4-201ENST00000320857 DUX4L7P0CJ90 424 aa14.3□□□□□ -0.12
SSR4-201ENST00000320857 RRASP10301 218 aa14.3□□□□□ -0.12
SSR4-201ENST00000320857 KLRB1Q12918 225 aa14.3□□□□□ -0.12
SSR4-201ENST00000320857 FOXRED2Q8IWF2 684 aa14.3□□□□□ -0.12
SSR4-201ENST00000320857 SLC35G3Q8N808 338 aa14.3□□□□□ -0.12
SSR4-201ENST00000320857 RELL2Q8NC24 303 aaPredicted RBP14.3□□□□□ -0.12
SSR4-201ENST00000320857 NUP37Q8NFH4 326 aa14.3□□□□□ -0.12
SSR4-201ENST00000320857 LHFPL5Q8TAF8 219 aa14.3□□□□□ -0.12
SSR4-201ENST00000320857 MEGF10Q96KG7 1140 aa14.3□□□□□ -0.12
SSR4-201ENST00000320857 SEBOXQ9HB31 216 aaPredicted RBP14.3□□□□□ -0.12
SSR4-201ENST00000320857 OR1A1Q9P1Q5 309 aa14.3□□□□□ -0.12
SSR4-201ENST00000320857 DUX4Q9UBX2 424 aa14.3□□□□□ -0.12
SSR4-201ENST00000320857 OOEPA6NGQ2 149 aa14.29□□□□□ -0.12
SSR4-201ENST00000320857 SRRM5B3KS81 715 aa14.29□□□□□ -0.12
SSR4-201ENST00000320857 H0Y980 276 aa14.29□□□□□ -0.12
SSR4-201ENST00000320857 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.29□□□□□ -0.12
SSR4-201ENST00000320857 KCNAB3O43448 404 aa14.29□□□□□ -0.12
SSR4-201ENST00000320857 PGLYRP1O75594 196 aaPredicted RBP14.29□□□□□ -0.12
SSR4-201ENST00000320857 SCGB1D2O95969 90 aa14.29□□□□□ -0.12
SSR4-201ENST00000320857 PTAFRP25105 342 aa14.29□□□□□ -0.12
SSR4-201ENST00000320857 UCP1P25874 307 aa14.29□□□□□ -0.12
SSR4-201ENST00000320857 COL10A1Q03692 680 aa14.29□□□□□ -0.12
SSR4-201ENST00000320857 PDZD9Q8IXQ8 264 aa14.29□□□□□ -0.12
SSR4-201ENST00000320857 PRR18Q8N4B5 295 aa14.29□□□□□ -0.12
SSR4-201ENST00000320857 STOML3Q8TAV4 291 aa14.29□□□□□ -0.12
SSR4-201ENST00000320857 AKR1E2Q96JD6 320 aa14.29□□□□□ -0.12
SSR4-201ENST00000320857 OR2V2Q96R30 315 aa14.29□□□□□ -0.12
SSR4-201ENST00000320857 SPIN2AQ99865 258 aa14.29□□□□□ -0.12
SSR4-201ENST00000320857 SPIN2BQ9BPZ2 258 aa14.29□□□□□ -0.12
SSR4-201ENST00000320857 SHARPINQ9H0F6 387 aa14.29□□□□□ -0.12
SSR4-201ENST00000320857 ZC4H2Q9NQZ6 224 aa14.29□□□□□ -0.12
SSR4-201ENST00000320857 MED9Q9NWA0 146 aa14.29□□□□□ -0.12
SSR4-201ENST00000320857 LSM5Q9Y4Y9 91 aaKnown RBP14.29□□□□□ -0.12
SSR4-201ENST00000320857 MSGN1A6NI15 193 aa14.28□□□□□ -0.12
SSR4-201ENST00000320857 SPRY3O43610 288 aa14.28□□□□□ -0.12
SSR4-201ENST00000320857 CDS2O95674 445 aa14.28□□□□□ -0.12
SSR4-201ENST00000320857 WNT2P09544 360 aa14.28□□□□□ -0.12
SSR4-201ENST00000320857 TPT1P13693 172 aaKnown RBP14.28□□□□□ -0.12
SSR4-201ENST00000320857 OR3A1P47881 315 aa14.28□□□□□ -0.12
SSR4-201ENST00000320857 SELENOHQ8IZQ5 122 aaKnown RBP14.28□□□□□ -0.12
SSR4-201ENST00000320857 OR5D13Q8NGL4 314 aa14.28□□□□□ -0.12
SSR4-201ENST00000320857 RND1Q92730 232 aa14.28□□□□□ -0.12
SSR4-201ENST00000320857 IL22RA2Q969J5 263 aa14.28□□□□□ -0.12
SSR4-201ENST00000320857 DNTTIP1Q9H147 329 aa14.28□□□□□ -0.12
SSR4-201ENST00000320857 PLEKHA2Q9HB19 425 aa14.28□□□□□ -0.12
SSR4-201ENST00000320857 E5RGE8 158 aa14.27□□□□□ -0.12
SSR4-201ENST00000320857 K7EPK0 472 aa14.27□□□□□ -0.12
SSR4-201ENST00000320857 TAAR5O14804 337 aa14.27□□□□□ -0.12
SSR4-201ENST00000320857 MBPP02686 304 aaPredicted RBP14.27□□□□□ -0.12
SSR4-201ENST00000320857 HEXAP06865 529 aa14.27□□□□□ -0.12
SSR4-201ENST00000320857 PRDX2P32119 198 aa14.27□□□□□ -0.12
SSR4-201ENST00000320857 TESK1Q15569 626 aa14.27□□□□□ -0.12
SSR4-201ENST00000320857 C22orf34Q6ZV56 151 aa14.27□□□□□ -0.12
SSR4-201ENST00000320857 WFDC8Q8IUA0 241 aa14.27□□□□□ -0.12
SSR4-201ENST00000320857 FAM71E2Q8N5Q1 922 aa14.27□□□□□ -0.12
SSR4-201ENST00000320857 PPP1R35Q8TAP8 253 aa14.27□□□□□ -0.12
SSR4-201ENST00000320857 GALMQ96C23 342 aa14.27□□□□□ -0.12
SSR4-201ENST00000320857 VKORC1Q9BQB6 163 aa14.27□□□□□ -0.12
SSR4-201ENST00000320857 MRPL37Q9BZE1 423 aaKnown RBP14.27□□□□□ -0.12
SSR4-201ENST00000320857 PFDN2Q9UHV9 154 aa14.27□□□□□ -0.12
SSR4-201ENST00000320857 NSG2Q9Y328 171 aa14.27□□□□□ -0.12
SSR4-201ENST00000320857 RBM7Q9Y580 266 aaKnown RBP14.27□□□□□ -0.12
SSR4-201ENST00000320857 SHANK1Q9Y566 2161 aa14.27□□□□□ -0.13
SSR4-201ENST00000320857 HEATR1Q9H583 2144 aaKnown RBP14.27□□□□□ -0.13
SSR4-201ENST00000320857 HKR1P10072 659 aa14.26□□□□□ -0.13
SSR4-201ENST00000320857 TNFSF4P23510 183 aa14.26□□□□□ -0.13
SSR4-201ENST00000320857 F2RP25116 425 aa14.26□□□□□ -0.13
SSR4-201ENST00000320857 RPL12P30050 165 aaKnown RBP14.26□□□□□ -0.13
SSR4-201ENST00000320857 CEACAM6P40199 344 aa14.26□□□□□ -0.13
SSR4-201ENST00000320857 GABRA2P47869 451 aa14.26□□□□□ -0.13
SSR4-201ENST00000320857 CASP6P55212 293 aa14.26□□□□□ -0.13
SSR4-201ENST00000320857 EIF5AP63241 154 aaKnown RBP14.26□□□□□ -0.13
SSR4-201ENST00000320857 AESQ08117 197 aa14.26□□□□□ -0.13
SSR4-201ENST00000320857 KRBOX4Q5JUW0 171 aa14.26□□□□□ -0.13
SSR4-201ENST00000320857 TRAT1Q6PIZ9 186 aa14.26□□□□□ -0.13
SSR4-201ENST00000320857 MOGAT3Q86VF5 341 aa14.26□□□□□ -0.13
SSR4-201ENST00000320857 FAM219AQ8IW50 185 aa14.26□□□□□ -0.13
SSR4-201ENST00000320857 CD177Q8N6Q3 437 aa14.26□□□□□ -0.13
SSR4-201ENST00000320857 COQ2Q96H96 371 aa14.26□□□□□ -0.13
SSR4-201ENST00000320857 CYTL1Q9NRR1 136 aa14.26□□□□□ -0.13
SSR4-201ENST00000320857 C12orf77C9JDV5 145 aa14.26□□□□□ -0.13
SSR4-201ENST00000320857 ST8SIA3O43173 380 aa14.26□□□□□ -0.13
SSR4-201ENST00000320857 PSG2P11465 335 aa14.26□□□□□ -0.13
SSR4-201ENST00000320857 SFTPCP11686 197 aa14.26□□□□□ -0.13
SSR4-201ENST00000320857 EGR1P18146 543 aa14.26□□□□□ -0.13
SSR4-201ENST00000320857 IL2RGP31785 369 aa14.26□□□□□ -0.13
SSR4-201ENST00000320857 GATA4P43694 442 aa14.26□□□□□ -0.13
SSR4-201ENST00000320857 PAX5Q02548 391 aa14.26□□□□□ -0.13
SSR4-201ENST00000320857 SNTB1Q13884 538 aaKnown RBP14.26□□□□□ -0.13
SSR4-201ENST00000320857 ITLN1Q8WWA0 313 aa14.26□□□□□ -0.13
SSR4-201ENST00000320857 RBPMSQ93062 196 aaKnown RBP14.26□□□□□ -0.13
SSR4-201ENST00000320857 DMRTA2Q96SC8 542 aa14.26□□□□□ -0.13
SSR4-201ENST00000320857 NKX2-6A6NCS4 301 aa14.25□□□□□ -0.13
SSR4-201ENST00000320857 TNFSF12O43508 249 aa14.25□□□□□ -0.13
SSR4-201ENST00000320857 HOXA4Q00056 320 aaPredicted RBP14.25□□□□□ -0.13
SSR4-201ENST00000320857 THOC7Q6I9Y2 204 aaKnown RBP14.25□□□□□ -0.13
SSR4-201ENST00000320857 BAP18Q8IXM2 172 aa14.25□□□□□ -0.13
SSR4-201ENST00000320857 GCSAMQ8N6F7 178 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms