RNA–Protein interactions for RNA: ENST00000316407.8

USF3-201, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 13,708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-201ENST00000316407 CPEB3Q8NE35 698 aaKnown RBP7.71□□□□□ -1.17
USF3-201ENST00000316407 SPTAN1Q13813 2472 aaKnown RBP7.71□□□□□ -1.17
USF3-201ENST00000316407 SERTM1A2A2V5 107 aa7.71□□□□□ -1.17
USF3-201ENST00000316407 EIF4E2O60573 245 aaKnown RBP7.71□□□□□ -1.17
USF3-201ENST00000316407 IGHV4-34P06331 123 aa7.71□□□□□ -1.17
USF3-201ENST00000316407 RAE1P78406 368 aaKnown RBP7.71□□□□□ -1.17
USF3-201ENST00000316407 NIT1Q86X76 327 aa7.71□□□□□ -1.17
USF3-201ENST00000316407 MEGF9Q9H1U4 602 aa7.71□□□□□ -1.17
USF3-201ENST00000316407 KIR3DX1Q9H7L2 352 aa7.71□□□□□ -1.17
USF3-201ENST00000316407 TNFSF18Q9UNG2 199 aa7.71□□□□□ -1.17
USF3-201ENST00000316407 DRD1P21728 446 aa7.71□□□□□ -1.18
USF3-201ENST00000316407 TMEM50BP56557 158 aa7.71□□□□□ -1.18
USF3-201ENST00000316407 OR4C3Q8NH37 302 aa7.71□□□□□ -1.18
USF3-201ENST00000316407 TSPAN32Q96QS1 320 aa7.71□□□□□ -1.18
USF3-201ENST00000316407 TNFRSF19Q9NS68 423 aa7.71□□□□□ -1.18
USF3-201ENST00000316407 PPIL1Q9Y3C6 166 aa7.71□□□□□ -1.18
USF3-201ENST00000316407 NRAPQ86VF7 1730 aa7.71□□□□□ -1.18
USF3-201ENST00000316407 A6NNC1 897 aa7.71□□□□□ -1.18
USF3-201ENST00000316407 PITX3O75364 302 aa7.71□□□□□ -1.18
USF3-201ENST00000316407 CDX1P47902 265 aaPredicted RBP7.71□□□□□ -1.18
USF3-201ENST00000316407 MSRB3Q8IXL7 192 aa7.71□□□□□ -1.18
USF3-201ENST00000316407 APCDD1LQ8NCL9 501 aa7.71□□□□□ -1.18
USF3-201ENST00000316407 AGBL5Q8NDL9 886 aa7.71□□□□□ -1.18
USF3-201ENST00000316407 OR13H1Q8NG92 308 aa7.71□□□□□ -1.18
USF3-201ENST00000316407 R3HDM4Q96D70 268 aa7.71□□□□□ -1.18
USF3-201ENST00000316407 EAF1Q96JC9 268 aaPredicted RBP7.71□□□□□ -1.18
USF3-201ENST00000316407 MIEN1Q9BRT3 115 aa7.71□□□□□ -1.18
USF3-201ENST00000316407 ANAPC13Q9BS18 74 aa7.71□□□□□ -1.18
USF3-201ENST00000316407 FRRS1LQ9P0K9 344 aa7.71□□□□□ -1.18
USF3-201ENST00000316407 SYNGR2O43760 224 aa7.71□□□□□ -1.18
USF3-201ENST00000316407 PTP4A3O75365 173 aa7.71□□□□□ -1.18
USF3-201ENST00000316407 CLDN15P56746 228 aa7.71□□□□□ -1.18
USF3-201ENST00000316407 SNRNP40Q96DI7 357 aaKnown RBP7.71□□□□□ -1.18
USF3-201ENST00000316407 PARP14Q460N5 1801 aa7.71□□□□□ -1.18
USF3-201ENST00000316407 TNRC6AQ8NDV7 1962 aaKnown RBP7.71□□□□□ -1.18
USF3-201ENST00000316407 PSG2P11465 335 aa7.71□□□□□ -1.18
USF3-201ENST00000316407 LDLRAD2Q5SZI1 272 aa7.71□□□□□ -1.18
USF3-201ENST00000316407 MRGPRGQ86SM5 289 aa7.71□□□□□ -1.18
USF3-201ENST00000316407 A0A0B4J2E0 115 aa7.71□□□□□ -1.18
USF3-201ENST00000316407 A0A1B0GX12 115 aa7.71□□□□□ -1.18
USF3-201ENST00000316407 CCL4L1Q8NHW4 92 aa7.71□□□□□ -1.18
USF3-201ENST00000316407 FAM216AQ8WUB2 273 aa7.71□□□□□ -1.18
USF3-201ENST00000316407 ANXA10Q9UJ72 324 aa7.71□□□□□ -1.18
USF3-201ENST00000316407 PRSS2P07478 247 aa7.7□□□□□ -1.18
USF3-201ENST00000316407 FHITP49789 147 aa7.7□□□□□ -1.18
USF3-201ENST00000316407 PNLIPRP2P54317 469 aa7.7□□□□□ -1.18
USF3-201ENST00000316407 EIF3IQ13347 325 aaKnown RBP7.7□□□□□ -1.18
USF3-201ENST00000316407 PRSS8Q16651 343 aa7.7□□□□□ -1.18
USF3-201ENST00000316407 VMA21Q3ZAQ7 101 aa7.7□□□□□ -1.18
USF3-201ENST00000316407 PLXNB2O15031 1838 aa7.7□□□□□ -1.18
USF3-201ENST00000316407 POU2F2P09086 479 aa7.7□□□□□ -1.18
USF3-201ENST00000316407 PLPPR5Q32ZL2 321 aa7.7□□□□□ -1.18
USF3-201ENST00000316407 RAXQ9Y2V3 346 aa7.7□□□□□ -1.18
USF3-201ENST00000316407 A0A0A6YYD5 115 aa7.7□□□□□ -1.18
USF3-201ENST00000316407 CBLN1P23435 193 aa7.7□□□□□ -1.18
USF3-201ENST00000316407 COX7A1P24310 79 aa7.7□□□□□ -1.18
USF3-201ENST00000316407 CEACAM16Q2WEN9 425 aa7.7□□□□□ -1.18
USF3-201ENST00000316407 HES7Q9BYE0 225 aa7.7□□□□□ -1.18
USF3-201ENST00000316407 WNT5BQ9H1J7 359 aa7.7□□□□□ -1.18
USF3-201ENST00000316407 MMP25Q9NPA2 562 aa7.7□□□□□ -1.18
USF3-201ENST00000316407 COA4Q9NYJ1 87 aa7.7□□□□□ -1.18
USF3-201ENST00000316407 HFEQ30201 348 aa7.7□□□□□ -1.18
USF3-201ENST00000316407 KLK13Q9UKR3 277 aa7.7□□□□□ -1.18
USF3-201ENST00000316407 SOCS1O15524 211 aa7.7□□□□□ -1.18
USF3-201ENST00000316407 LRRC10Q5BKY1 277 aa7.7□□□□□ -1.18
USF3-201ENST00000316407 JMJD6Q6NYC1 403 aaPredicted RBP7.7□□□□□ -1.18
USF3-201ENST00000316407 ST8SIA1Q92185 356 aa7.7□□□□□ -1.18
USF3-201ENST00000316407 APOBEC3DQ96AK3 386 aaPredicted RBP7.7□□□□□ -1.18
USF3-201ENST00000316407 CTLA4P16410 223 aa7.7□□□□□ -1.18
USF3-201ENST00000316407 AMMECR1LQ6DCA0 310 aa7.7□□□□□ -1.18
USF3-201ENST00000316407 CDX2Q99626 313 aaPredicted RBP7.7□□□□□ -1.18
USF3-201ENST00000316407 CXCL13O43927 109 aa7.7□□□□□ -1.18
USF3-201ENST00000316407 EPPINO95925 133 aa7.7□□□□□ -1.18
USF3-201ENST00000316407 TRGC1P0CF51 173 aa7.7□□□□□ -1.18
USF3-201ENST00000316407 MFRPQ9BY79 579 aa7.7□□□□□ -1.18
USF3-201ENST00000316407 PEF1Q9UBV8 284 aaKnown RBP7.7□□□□□ -1.18
USF3-201ENST00000316407 SAPCD1Q5SSQ6 148 aa7.7□□□□□ -1.18
USF3-201ENST00000316407 CNRIP1Q96F85 164 aaPredicted RBP7.7□□□□□ -1.18
USF3-201ENST00000316407 ST6GAL1P15907 406 aa7.7□□□□□ -1.18
USF3-201ENST00000316407 ZNF665Q9H7R5 613 aa7.7□□□□□ -1.18
USF3-201ENST00000316407 PLXNA1Q9UIW2 1896 aa7.7□□□□□ -1.18
USF3-201ENST00000316407 TRAV38-1A0A0B4J264 116 aa7.7□□□□□ -1.18
USF3-201ENST00000316407 KLF4O43474 513 aa7.7□□□□□ -1.18
USF3-201ENST00000316407 IL4P05112 153 aa7.7□□□□□ -1.18
USF3-201ENST00000316407 ZNF735P0CB33 412 aa7.7□□□□□ -1.18
USF3-201ENST00000316407 GPHA2Q96T91 129 aa7.7□□□□□ -1.18
USF3-201ENST00000316407 TNXAQ16473 311 aa7.7□□□□□ -1.18
USF3-201ENST00000316407 C6orf106Q9H6K1 298 aaPredicted RBP7.7□□□□□ -1.18
USF3-201ENST00000316407 MRM2Q9UI43 246 aaKnown RBP7.69□□□□□ -1.18
USF3-201ENST00000316407 FOLR2P14207 255 aa7.69□□□□□ -1.18
USF3-201ENST00000316407 ATP6V0CP27449 155 aa7.69□□□□□ -1.18
USF3-201ENST00000316407 GFRA1P56159 465 aa7.69□□□□□ -1.18
USF3-201ENST00000316407 ALKAL1Q6UXT8 129 aa7.69□□□□□ -1.18
USF3-201ENST00000316407 ANKRD37Q7Z713 158 aa7.69□□□□□ -1.18
USF3-201ENST00000316407 FAM222BQ8WU58 562 aa7.69□□□□□ -1.18
USF3-201ENST00000316407 NAT6Q93015 286 aa7.69□□□□□ -1.18
USF3-201ENST00000316407 RTN4RQ9BZR6 473 aa7.69□□□□□ -1.18
USF3-201ENST00000316407 FNDC4Q9H6D8 234 aaPredicted RBP7.69□□□□□ -1.18
USF3-201ENST00000316407 RECKO95980 971 aa7.69□□□□□ -1.18
USF3-201ENST00000316407 PMELP40967 661 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms