RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 PTX4Q96A99 478 aa6.49□□□□□ -1.37
TRIM55-202ENST00000315962 SPSB1Q96BD6 273 aa6.49□□□□□ -1.37
TRIM55-202ENST00000315962 SARAFQ96BY9 339 aa6.49□□□□□ -1.37
TRIM55-202ENST00000315962 FAHD2AQ96GK7 314 aa6.49□□□□□ -1.37
TRIM55-202ENST00000315962 Q96M66 194 aa6.49□□□□□ -1.37
TRIM55-202ENST00000315962 PRDM14Q9GZV8 571 aa6.49□□□□□ -1.37
TRIM55-202ENST00000315962 HEATR1Q9H583 2144 aaKnown RBP6.49□□□□□ -1.37
TRIM55-202ENST00000315962 ZDHHC8Q9ULC8 765 aa6.49□□□□□ -1.37
TRIM55-202ENST00000315962 ABCA4P78363 2273 aa6.49□□□□□ -1.37
TRIM55-202ENST00000315962 AKAP6Q13023 2319 aa6.49□□□□□ -1.37
TRIM55-202ENST00000315962 ZFYVE26Q68DK2 2539 aa6.48□□□□□ -1.37
TRIM55-202ENST00000315962 WDR1O75083 606 aa6.48□□□□□ -1.37
TRIM55-202ENST00000315962 IFNA4P05014 189 aa6.48□□□□□ -1.37
TRIM55-202ENST00000315962 ZNF83P51522 516 aa6.48□□□□□ -1.37
TRIM55-202ENST00000315962 FUT6P51993 359 aa6.48□□□□□ -1.37
TRIM55-202ENST00000315962 PNLIPRP3Q17RR3 467 aa6.48□□□□□ -1.37
TRIM55-202ENST00000315962 IGFL2Q6UWQ7 119 aa6.48□□□□□ -1.37
TRIM55-202ENST00000315962 COLCA1Q6ZS62 124 aa6.48□□□□□ -1.37
TRIM55-202ENST00000315962 ARRDC1Q8N5I2 433 aa6.48□□□□□ -1.37
TRIM55-202ENST00000315962 SLC25A40Q8TBP6 338 aa6.48□□□□□ -1.37
TRIM55-202ENST00000315962 HIST1H2AAQ96QV6 131 aa6.48□□□□□ -1.37
TRIM55-202ENST00000315962 PLSCR2Q9NRY7 297 aa6.48□□□□□ -1.37
TRIM55-202ENST00000315962 FAM24AA6NFZ4 105 aa6.48□□□□□ -1.37
TRIM55-202ENST00000315962 FIGNL2A6NMB9 653 aa6.48□□□□□ -1.37
TRIM55-202ENST00000315962 H3BP45 60 aa6.48□□□□□ -1.37
TRIM55-202ENST00000315962 TNFSF13O75888 250 aa6.48□□□□□ -1.37
TRIM55-202ENST00000315962 CST7O76096 145 aa6.48□□□□□ -1.37
TRIM55-202ENST00000315962 CST4P01036 141 aa6.48□□□□□ -1.37
TRIM55-202ENST00000315962 IGHG3P01860 377 aa6.48□□□□□ -1.37
TRIM55-202ENST00000315962 OR5H8P0DN80 308 aa6.48□□□□□ -1.37
TRIM55-202ENST00000315962 HOXC12P31275 282 aa6.48□□□□□ -1.37
TRIM55-202ENST00000315962 TGFBR3Q03167 851 aa6.48□□□□□ -1.37
TRIM55-202ENST00000315962 FAM27E3Q08E93 113 aa6.48□□□□□ -1.37
TRIM55-202ENST00000315962 DAZAP2Q15038 168 aaPredicted RBP6.48□□□□□ -1.37
TRIM55-202ENST00000315962 GABRA6Q16445 453 aa6.48□□□□□ -1.37
TRIM55-202ENST00000315962 KRTAP27-1Q3LI81 207 aa6.48□□□□□ -1.37
TRIM55-202ENST00000315962 VAX1Q5SQQ9 334 aa6.48□□□□□ -1.37
TRIM55-202ENST00000315962 RTL6Q6ICC9 239 aa6.48□□□□□ -1.37
TRIM55-202ENST00000315962 Q6ZT83 130 aa6.48□□□□□ -1.37
TRIM55-202ENST00000315962 LHFPL1Q86WI0 220 aa6.48□□□□□ -1.37
TRIM55-202ENST00000315962 ZDHHC23Q8IYP9 409 aa6.48□□□□□ -1.37
TRIM55-202ENST00000315962 FAM89BQ8N5H3 189 aa6.48□□□□□ -1.37
TRIM55-202ENST00000315962 STARD4Q96DR4 205 aa6.48□□□□□ -1.37
TRIM55-202ENST00000315962 ZNF251Q9BRH9 671 aa6.48□□□□□ -1.37
TRIM55-202ENST00000315962 ANKRD30BLA7E2S9 258 aa6.47□□□□□ -1.37
TRIM55-202ENST00000315962 DEDDO75618 318 aa6.47□□□□□ -1.37
TRIM55-202ENST00000315962 SNCAP37840 140 aa6.47□□□□□ -1.37
TRIM55-202ENST00000315962 NHLH1Q02575 133 aa6.47□□□□□ -1.37
TRIM55-202ENST00000315962 PSG7Q13046 419 aa6.47□□□□□ -1.37
TRIM55-202ENST00000315962 TMEM42Q69YG0 159 aa6.47□□□□□ -1.37
TRIM55-202ENST00000315962 SLC22A25Q6T423 547 aa6.47□□□□□ -1.37
TRIM55-202ENST00000315962 LHFPL2Q6ZUX7 228 aa6.47□□□□□ -1.37
TRIM55-202ENST00000315962 PEG10Q86TG7 708 aaKnown RBP6.47□□□□□ -1.37
TRIM55-202ENST00000315962 SGPP2Q8IWX5 399 aa6.47□□□□□ -1.37
TRIM55-202ENST00000315962 IL1F10Q8WWZ1 152 aa6.47□□□□□ -1.37
TRIM55-202ENST00000315962 EMG1Q92979 244 aaKnown RBP6.47□□□□□ -1.37
TRIM55-202ENST00000315962 OBP2BQ9NPH6 170 aa6.47□□□□□ -1.37
TRIM55-202ENST00000315962 KCNJ16Q9NPI9 418 aa6.47□□□□□ -1.37
TRIM55-202ENST00000315962 C19orf12Q9NSK7 152 aa6.47□□□□□ -1.37
TRIM55-202ENST00000315962 UBE2CO00762 179 aa6.47□□□□□ -1.37
TRIM55-202ENST00000315962 PHF1O43189 567 aaPredicted RBP6.47□□□□□ -1.37
TRIM55-202ENST00000315962 SS18L1O75177 396 aaPredicted RBP6.47□□□□□ -1.37
TRIM55-202ENST00000315962 GSTP1P09211 210 aaKnown RBP6.47□□□□□ -1.37
TRIM55-202ENST00000315962 PET100P0DJ07 73 aa6.47□□□□□ -1.37
TRIM55-202ENST00000315962 UCP2P55851 309 aa6.47□□□□□ -1.37
TRIM55-202ENST00000315962 PPP1CBP62140 327 aa6.47□□□□□ -1.37
TRIM55-202ENST00000315962 IL15RAQ13261 267 aa6.47□□□□□ -1.37
TRIM55-202ENST00000315962 KIAA0141Q14154 515 aaPredicted RBP6.47□□□□□ -1.37
TRIM55-202ENST00000315962 IZUMO4Q1ZYL8 232 aa6.47□□□□□ -1.37
TRIM55-202ENST00000315962 CLEC12BQ2HXU8 276 aa6.47□□□□□ -1.37
TRIM55-202ENST00000315962 TBC1D28Q2M2D7 210 aa6.47□□□□□ -1.37
TRIM55-202ENST00000315962 ABCA11PQ4W5N1 156 aa6.47□□□□□ -1.37
TRIM55-202ENST00000315962 UNQ6494/PRO21346Q6UXR6 183 aa6.47□□□□□ -1.37
TRIM55-202ENST00000315962 C20orf204Q6ZNR8 217 aa6.47□□□□□ -1.37
TRIM55-202ENST00000315962 C15orf54Q8N8G6 183 aa6.47□□□□□ -1.37
TRIM55-202ENST00000315962 RTN4IP1Q8WWV3 396 aaPredicted RBP6.47□□□□□ -1.37
TRIM55-202ENST00000315962 GTF3AQ92664 365 aaKnown RBP6.47□□□□□ -1.37
TRIM55-202ENST00000315962 PRO1933Q9H354 126 aa6.47□□□□□ -1.37
TRIM55-202ENST00000315962 CDH20Q9HBT6 801 aa6.47□□□□□ -1.37
TRIM55-202ENST00000315962 C1orf123Q9NWV4 160 aa6.47□□□□□ -1.37
TRIM55-202ENST00000315962 OR14J1Q9UGF5 321 aa6.47□□□□□ -1.37
TRIM55-202ENST00000315962 RAXQ9Y2V3 346 aa6.47□□□□□ -1.37
TRIM55-202ENST00000315962 FAM215AQ9Y5M1 114 aa6.47□□□□□ -1.37
TRIM55-202ENST00000315962 CXorf65A6NEN9 183 aa6.46□□□□□ -1.37
TRIM55-202ENST00000315962 WNT9BO14905 357 aa6.46□□□□□ -1.37
TRIM55-202ENST00000315962 IFNA21P01568 189 aa6.46□□□□□ -1.37
TRIM55-202ENST00000315962 HEXAP06865 529 aa6.46□□□□□ -1.37
TRIM55-202ENST00000315962 GLP1RP43220 463 aa6.46□□□□□ -1.37
TRIM55-202ENST00000315962 RPS23P62266 143 aaKnown RBP6.46□□□□□ -1.37
TRIM55-202ENST00000315962 ZNF674Q2M3X9 581 aa6.46□□□□□ -1.37
TRIM55-202ENST00000315962 CEACAM21Q3KPI0 293 aa6.46□□□□□ -1.37
TRIM55-202ENST00000315962 FAM53AQ6NSI3 398 aaPredicted RBP6.46□□□□□ -1.37
TRIM55-202ENST00000315962 FBXW12Q6X9E4 464 aa6.46□□□□□ -1.37
TRIM55-202ENST00000315962 SPNS3Q6ZMD2 512 aa6.46□□□□□ -1.37
TRIM55-202ENST00000315962 WDR86Q86TI4 376 aa6.46□□□□□ -1.37
TRIM55-202ENST00000315962 LRP11Q86VZ4 500 aa6.46□□□□□ -1.37
TRIM55-202ENST00000315962 KLF14Q8TD94 323 aaPredicted RBP6.46□□□□□ -1.37
TRIM55-202ENST00000315962 SPSB4Q96A44 273 aa6.46□□□□□ -1.37
TRIM55-202ENST00000315962 RBMXL1Q96E39 390 aaKnown RBP6.46□□□□□ -1.37
TRIM55-202ENST00000315962 SAT2Q96F10 170 aaPredicted RBP6.46□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms