RNA–Protein interactions for RNA: ENST00000311351.8

LSM1-201, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM1, Length 1,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-201ENST00000311351 C16orf82Q7Z2V1 217 aa13.02□□□□□ -0.33
LSM1-201ENST00000311351 DRAM1Q8N682 238 aa13.02□□□□□ -0.33
LSM1-201ENST00000311351 OR10X1Q8NGY0 326 aa13.02□□□□□ -0.33
LSM1-201ENST00000311351 WIPF2Q8TF74 440 aaPredicted RBP13.02□□□□□ -0.33
LSM1-201ENST00000311351 PHYHIPQ92561 330 aa13.02□□□□□ -0.33
LSM1-201ENST00000311351 RBM14Q96PK6 669 aaKnown RBP13.02□□□□□ -0.33
LSM1-201ENST00000311351 WNT10AQ9GZT5 417 aa13.02□□□□□ -0.33
LSM1-201ENST00000311351 CST11Q9H112 138 aa13.02□□□□□ -0.33
LSM1-201ENST00000311351 GFOD1Q9NXC2 390 aa13.02□□□□□ -0.33
LSM1-201ENST00000311351 TRAPPC2LQ9UL33 140 aa13.02□□□□□ -0.33
LSM1-201ENST00000311351 ORC5O43913 435 aa13.01□□□□□ -0.33
LSM1-201ENST00000311351 PEX14O75381 377 aa13.01□□□□□ -0.33
LSM1-201ENST00000311351 AMY1AP04745 511 aa13.01□□□□□ -0.33
LSM1-201ENST00000311351 AMY2AP04746 511 aa13.01□□□□□ -0.33
LSM1-201ENST00000311351 VSIG8P0DPA2 414 aa13.01□□□□□ -0.33
LSM1-201ENST00000311351 REG1BP48304 166 aa13.01□□□□□ -0.33
LSM1-201ENST00000311351 LOXL3P58215 753 aa13.01□□□□□ -0.33
LSM1-201ENST00000311351 TPBGQ13641 420 aa13.01□□□□□ -0.33
LSM1-201ENST00000311351 C1orf100Q5SVJ3 147 aa13.01□□□□□ -0.33
LSM1-201ENST00000311351 GLT8D1Q68CQ7 371 aa13.01□□□□□ -0.33
LSM1-201ENST00000311351 TMEM91Q6ZNR0 172 aa13.01□□□□□ -0.33
LSM1-201ENST00000311351 PRSS48Q7RTY5 328 aa13.01□□□□□ -0.33
LSM1-201ENST00000311351 GAPTQ8N292 157 aa13.01□□□□□ -0.33
LSM1-201ENST00000311351 PRR18Q8N4B5 295 aa13.01□□□□□ -0.33
LSM1-201ENST00000311351 AKR1E2Q96JD6 320 aa13.01□□□□□ -0.33
LSM1-201ENST00000311351 OCSTAMPQ9BR26 566 aa13.01□□□□□ -0.33
LSM1-201ENST00000311351 H3BUI4 141 aa13□□□□□ -0.33
LSM1-201ENST00000311351 HSD17B6O14756 317 aa13□□□□□ -0.33
LSM1-201ENST00000311351 SLC31A2O15432 143 aa13□□□□□ -0.33
LSM1-201ENST00000311351 PDCD6O75340 191 aa13□□□□□ -0.33
LSM1-201ENST00000311351 LPLP06858 475 aa13□□□□□ -0.33
LSM1-201ENST00000311351 UBBP0CG47 229 aa13□□□□□ -0.33
LSM1-201ENST00000311351 RCC1P18754 421 aaPredicted RBP13□□□□□ -0.33
LSM1-201ENST00000311351 SRMP19623 302 aa13□□□□□ -0.33
LSM1-201ENST00000311351 FUT3P21217 361 aa13□□□□□ -0.33
LSM1-201ENST00000311351 DEFA6Q01524 100 aa13□□□□□ -0.33
LSM1-201ENST00000311351 MLLT11Q13015 90 aaPredicted RBP13□□□□□ -0.33
LSM1-201ENST00000311351 NSUN5P1Q3KNT7 163 aa13□□□□□ -0.33
LSM1-201ENST00000311351 SLC16A12Q6ZSM3 486 aa13□□□□□ -0.33
LSM1-201ENST00000311351 C5orf24Q7Z6I8 188 aa13□□□□□ -0.33
LSM1-201ENST00000311351 OR10V1Q8NGI7 309 aa13□□□□□ -0.33
LSM1-201ENST00000311351 OR52M1Q8NGK5 317 aa13□□□□□ -0.33
LSM1-201ENST00000311351 OR1L1Q8NH94 360 aa13□□□□□ -0.33
LSM1-201ENST00000311351 GFI1Q99684 422 aa13□□□□□ -0.33
LSM1-201ENST00000311351 NICN1Q9BSH3 213 aa13□□□□□ -0.33
LSM1-201ENST00000311351 TMEM59Q9BXS4 323 aa13□□□□□ -0.33
LSM1-201ENST00000311351 GHRLQ9UBU3 117 aa13□□□□□ -0.33
LSM1-201ENST00000311351 FAM90A9PA6NNJ1 464 aa12.99□□□□□ -0.33
LSM1-201ENST00000311351 SLC22A1O15245 554 aa12.99□□□□□ -0.33
LSM1-201ENST00000311351 HBZP02008 142 aa12.99□□□□□ -0.33
LSM1-201ENST00000311351 CPEP16870 476 aa12.99□□□□□ -0.33
LSM1-201ENST00000311351 CHATP28329 748 aa12.99□□□□□ -0.33
LSM1-201ENST00000311351 HTR2CP28335 458 aa12.99□□□□□ -0.33
LSM1-201ENST00000311351 RAB7AP51149 207 aa12.99□□□□□ -0.33
LSM1-201ENST00000311351 UNC119Q13432 240 aa12.99□□□□□ -0.33
LSM1-201ENST00000311351 HES1Q14469 280 aa12.99□□□□□ -0.33
LSM1-201ENST00000311351 C9orf152Q5JTZ5 239 aa12.99□□□□□ -0.33
LSM1-201ENST00000311351 C6orf183Q5T699 404 aa12.99□□□□□ -0.33
LSM1-201ENST00000311351 OR8H3Q8N146 312 aa12.99□□□□□ -0.33
LSM1-201ENST00000311351 MRPL30Q8TCC3 161 aaKnown RBP12.99□□□□□ -0.33
LSM1-201ENST00000311351 MGLLQ99685 303 aa12.99□□□□□ -0.33
LSM1-201ENST00000311351 CITED2Q99967 270 aaPredicted RBP12.99□□□□□ -0.33
LSM1-201ENST00000311351 ISYNA1Q9NPH2 558 aa12.99□□□□□ -0.33
LSM1-201ENST00000311351 MOB4Q9Y3A3 225 aa12.99□□□□□ -0.33
LSM1-201ENST00000311351 IGHV3-72A0A0B4J1Y9 119 aa12.98□□□□□ -0.33
LSM1-201ENST00000311351 ADARB2-AS1A8MUL3 147 aa12.98□□□□□ -0.33
LSM1-201ENST00000311351 CCRL2O00421 344 aa12.98□□□□□ -0.33
LSM1-201ENST00000311351 SPINT2O43291 252 aa12.98□□□□□ -0.33
LSM1-201ENST00000311351 FAM106CPP0CH98 169 aa12.98□□□□□ -0.33
LSM1-201ENST00000311351 TMEM11P17152 192 aa12.98□□□□□ -0.33
LSM1-201ENST00000311351 RPS27AP62979 156 aaKnown RBP12.98□□□□□ -0.33
LSM1-201ENST00000311351 QRFPP83859 136 aa12.98□□□□□ -0.33
LSM1-201ENST00000311351 FABP5Q01469 135 aa12.98□□□□□ -0.33
LSM1-201ENST00000311351 ZNF816Q0VGE8 651 aaPredicted RBP12.98□□□□□ -0.33
LSM1-201ENST00000311351 HNF4GQ14541 408 aa12.98□□□□□ -0.33
LSM1-201ENST00000311351 GNMTQ14749 295 aa12.98□□□□□ -0.33
LSM1-201ENST00000311351 P2RY14Q15391 338 aa12.98□□□□□ -0.33
LSM1-201ENST00000311351 TBCEQ15813 527 aaPredicted RBP12.98□□□□□ -0.33
LSM1-201ENST00000311351 C6orf201Q7Z4U5 140 aa12.98□□□□□ -0.33
LSM1-201ENST00000311351 C1QL4Q86Z23 238 aa12.98□□□□□ -0.33
LSM1-201ENST00000311351 ZNF439Q8NDP4 499 aa12.98□□□□□ -0.33
LSM1-201ENST00000311351 OR6M1Q8NGM8 313 aa12.98□□□□□ -0.33
LSM1-201ENST00000311351 SULT4A1Q9BR01 284 aa12.98□□□□□ -0.33
LSM1-201ENST00000311351 GNG12Q9UBI6 72 aa12.98□□□□□ -0.33
LSM1-201ENST00000311351 PLXNB1O43157 2135 aa12.98□□□□□ -0.33
LSM1-201ENST00000311351 A0A0A6YYD4 124 aa12.97□□□□□ -0.33
LSM1-201ENST00000311351 IGHV1-3A0A0C4DH29 117 aa12.97□□□□□ -0.33
LSM1-201ENST00000311351 TMEM14DPA8MWL7 114 aa12.97□□□□□ -0.33
LSM1-201ENST00000311351 CA11O75493 328 aa12.97□□□□□ -0.33
LSM1-201ENST00000311351 IGKV1D-33P01593 117 aa12.97□□□□□ -0.33
LSM1-201ENST00000311351 IGKV1-33P01594 117 aa12.97□□□□□ -0.33
LSM1-201ENST00000311351 GLAP06280 429 aa12.97□□□□□ -0.33
LSM1-201ENST00000311351 CD37P11049 281 aa12.97□□□□□ -0.33
LSM1-201ENST00000311351 CALRP27797 417 aaKnown RBP12.97□□□□□ -0.33
LSM1-201ENST00000311351 TRAM1Q15629 374 aa12.97□□□□□ -0.33
LSM1-201ENST00000311351 TRAT1Q6PIZ9 186 aa12.97□□□□□ -0.33
LSM1-201ENST00000311351 C10orf99Q6UWK7 81 aa12.97□□□□□ -0.33
LSM1-201ENST00000311351 ZNF367Q7RTV3 350 aa12.97□□□□□ -0.33
LSM1-201ENST00000311351 THNSL2Q86YJ6 484 aa12.97□□□□□ -0.33
LSM1-201ENST00000311351 LINC00311Q8N616 119 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms