RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 OR9G1Q8NH87 305 aa8.94□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 UBALD1Q8TB05 177 aa8.94□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 PRDM13Q9H4Q3 707 aa8.94□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 ZNF286AQ9HBT8 521 aa8.94□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 C12orf4Q9NQ89 552 aa8.94□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 ABCB10Q9NRK6 738 aa8.94□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 MBNL3Q9NUK0 354 aaKnown RBP8.94□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 GNG12Q9UBI6 72 aa8.94□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 A0A087X0M5 115 aa8.93□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 A0A1B0GX30 115 aa8.93□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 FOXI3A8MTJ6 420 aaPredicted RBP8.93□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 SERPINE3A8MV23 424 aa8.93□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 C12orf77C9JDV5 145 aa8.93□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 C15orf65H3BRN8 121 aa8.93□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 CLDN34H7C241 214 aa8.93□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 HBZP02008 142 aa8.93□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 TFAP2AP05549 437 aa8.93□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 CRYBA1P05813 215 aa8.93□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 RNASE1P07998 156 aaKnown RBP8.93□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 HIST1H1DP16402 221 aaKnown RBP8.93□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 RCC1P18754 421 aaPredicted RBP8.93□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 TALDO1P37837 337 aa8.93□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 SLC9A3R2Q15599 337 aa8.93□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 SSX2Q16385 188 aa8.93□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 LRRC75BQ2VPJ9 315 aa8.93□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 HLA-DRB5Q30154 266 aa8.93□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 KRTAP24-1Q3LI83 254 aa8.93□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 MOGAT2Q3SYC2 334 aa8.93□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 PLA1AQ53H76 456 aa8.93□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 SLC16A12Q6ZSM3 486 aa8.93□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 OR52M1Q8NGK5 317 aa8.93□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 OR10X1Q8NGY0 326 aa8.93□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 FAM216AQ8WUB2 273 aa8.93□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 MALSU1Q96EH3 234 aa8.93□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 MMP28Q9H239 520 aa8.93□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 LINC00574Q9H8X3 128 aa8.93□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 TAF9BQ9HBM6 251 aa8.93□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 RHBDL2Q9NX52 303 aa8.93□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 GFOD1Q9NXC2 390 aa8.93□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 SETD2Q9BYW2 2564 aaPredicted RBP8.93□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 TRBV6-6A0A0A6YYG2 114 aa8.92□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 IGHV3-43A0A0B4J1X8 118 aa8.92□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 LEUTXA8MZ59 168 aa8.92□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 J3QR06 171 aa8.92□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 F2RL2O00254 374 aa8.92□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 MFNGO00587 321 aa8.92□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 RGS11O94810 467 aa8.92□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 NAPSAO96009 420 aa8.92□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 IGHV3-7P01780 117 aa8.92□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 IGHV4-59P01825 116 aa8.92□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 IGHV3-43DP0DP04 118 aa8.92□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 GNB3P16520 340 aa8.92□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 IL3RAP26951 378 aa8.92□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 RPS19P39019 145 aaKnown RBP8.92□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 IER3P46695 156 aa8.92□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 RPL5P46777 297 aaKnown RBP8.92□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 TMEM50BP56557 158 aa8.92□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 HLA-DRB3P79483 266 aa8.92□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 ARFRP1Q13795 201 aa8.92□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 Q3ZCU0 254 aa8.92□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 PLAC9Q5JTB6 97 aa8.92□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 CCDC144NLQ6NUI1 221 aa8.92□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 CLVS1Q8IUQ0 354 aaPredicted RBP8.92□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 OR4P4Q8NGL7 312 aa8.92□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 OR1L1Q8NH94 360 aa8.92□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 C17orf50Q8WW18 174 aa8.92□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 LEAP2Q969E1 77 aa8.92□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 SLC25A46Q96AG3 418 aa8.92□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 RPEQ96AT9 228 aa8.92□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 GALMQ96C23 342 aa8.92□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 KCTD12Q96CX2 325 aaKnown RBP8.92□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 SSX3Q99909 188 aa8.92□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 HDHD3Q9BSH5 251 aaPredicted RBP8.92□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 C19orf24Q9BVV8 132 aa8.92□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 NAA50Q9GZZ1 169 aaKnown RBP8.92□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 MEGF9Q9H1U4 602 aa8.92□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 DPM3Q9P2X0 92 aa8.92□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 JPT1Q9UK76 154 aa8.92□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 SPATA2Q9UM82 520 aa8.92□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 HILPDAQ9Y5L2 63 aa8.92□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 JMJD1CQ15652 2540 aa8.92□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 POM121CA8CG34 1229 aa8.91□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 BUB1B-PAK6H3BSN5 160 aa8.91□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 H3BUX3 64 aa8.91□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 RAB27BO00194 218 aa8.91□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 IGLV1-47P01700 117 aa8.91□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 LPLP06858 475 aa8.91□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 MNDAP41218 407 aa8.91□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 RORCP51449 518 aa8.91□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 GNG2P59768 71 aa8.91□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 HTD2P86397 168 aa8.91□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 HMGN3Q15651 99 aa8.91□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 AANATQ16613 207 aa8.91□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 UBE2NLQ5JXB2 153 aa8.91□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 STEAP3Q658P3 488 aa8.91□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 OLFML2AQ68BL7 652 aa8.91□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 ZNF880Q6PDB4 577 aa8.91□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 C16orf87Q6PH81 154 aa8.91□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.91□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 OR10V1Q8NGI7 309 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms