RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 BLOC1S6Q9UL45 172 aa21.13■□□□□ 0.97
CDKN2A-201ENST00000304494 A0A1W2PPI3 338 aa21.12■□□□□ 0.97
CDKN2A-201ENST00000304494 FAM90A9PA6NNJ1 464 aa21.12■□□□□ 0.97
CDKN2A-201ENST00000304494 MPIG6BO95866 241 aa21.12■□□□□ 0.97
CDKN2A-201ENST00000304494 VHLP40337 213 aa21.12■□□□□ 0.97
CDKN2A-201ENST00000304494 Q3ZCU0 254 aa21.12■□□□□ 0.97
CDKN2A-201ENST00000304494 LINC00311Q8N616 119 aa21.12■□□□□ 0.97
CDKN2A-201ENST00000304494 OR4K15Q8NH41 348 aa21.12■□□□□ 0.97
CDKN2A-201ENST00000304494 OR56B4Q8NH76 319 aa21.12■□□□□ 0.97
CDKN2A-201ENST00000304494 C12orf77C9JDV5 145 aa21.11■□□□□ 0.97
CDKN2A-201ENST00000304494 ARL6IP5O75915 188 aa21.11■□□□□ 0.97
CDKN2A-201ENST00000304494 SNRNP70P08621 437 aaKnown RBP21.11■□□□□ 0.97
CDKN2A-201ENST00000304494 CPEP16870 476 aa21.11■□□□□ 0.97
CDKN2A-201ENST00000304494 HTR2CP28335 458 aa21.11■□□□□ 0.97
CDKN2A-201ENST00000304494 LOXL3P58215 753 aa21.11■□□□□ 0.97
CDKN2A-201ENST00000304494 ABCA11PQ4W5N1 156 aa21.11■□□□□ 0.97
CDKN2A-201ENST00000304494 SIGIRRQ6IA17 410 aa21.11■□□□□ 0.97
CDKN2A-201ENST00000304494 DRAM1Q8N682 238 aa21.11■□□□□ 0.97
CDKN2A-201ENST00000304494 KCNG3Q8TAE7 436 aa21.11■□□□□ 0.97
CDKN2A-201ENST00000304494 UBALD1Q8TB05 177 aa21.11■□□□□ 0.97
CDKN2A-201ENST00000304494 WIPF2Q8TF74 440 aaPredicted RBP21.11■□□□□ 0.97
CDKN2A-201ENST00000304494 OCSTAMPQ9BR26 566 aa21.11■□□□□ 0.97
CDKN2A-201ENST00000304494 RAB26Q9ULW5 256 aa21.11■□□□□ 0.97
CDKN2A-201ENST00000304494 A0A1W2PPE3 182 aa21.1■□□□□ 0.97
CDKN2A-201ENST00000304494 UBE2QL1A1L167 161 aa21.1■□□□□ 0.97
CDKN2A-201ENST00000304494 HSD17B6O14756 317 aa21.1■□□□□ 0.97
CDKN2A-201ENST00000304494 GAPDHP04406 335 aaKnown RBP21.1■□□□□ 0.97
CDKN2A-201ENST00000304494 VSIG8P0DPA2 414 aa21.1■□□□□ 0.97
CDKN2A-201ENST00000304494 CD37P11049 281 aa21.1■□□□□ 0.97
CDKN2A-201ENST00000304494 IL3RAP26951 378 aa21.1■□□□□ 0.97
CDKN2A-201ENST00000304494 ZNF816Q0VGE8 651 aaPredicted RBP21.1■□□□□ 0.97
CDKN2A-201ENST00000304494 DIAPH2-AS1Q14236 149 aa21.1■□□□□ 0.97
CDKN2A-201ENST00000304494 OR6M1Q8NGM8 313 aa21.1■□□□□ 0.97
CDKN2A-201ENST00000304494 NEDD4LQ96PU5 975 aa21.1■□□□□ 0.97
CDKN2A-201ENST00000304494 MGLLQ99685 303 aa21.1■□□□□ 0.97
CDKN2A-201ENST00000304494 TMEM59Q9BXS4 323 aa21.1■□□□□ 0.97
CDKN2A-201ENST00000304494 MOB4Q9Y3A3 225 aa21.1■□□□□ 0.97
CDKN2A-201ENST00000304494 CCRL2O00421 344 aa21.09■□□□□ 0.97
CDKN2A-201ENST00000304494 SLC22A1O15245 554 aa21.09■□□□□ 0.97
CDKN2A-201ENST00000304494 CD28P10747 220 aa21.09■□□□□ 0.97
CDKN2A-201ENST00000304494 RPS25P62851 125 aaKnown RBP21.09■□□□□ 0.97
CDKN2A-201ENST00000304494 RPS27AP62979 156 aaKnown RBP21.09■□□□□ 0.97
CDKN2A-201ENST00000304494 HES1Q14469 280 aa21.09■□□□□ 0.97
CDKN2A-201ENST00000304494 TMEM95Q3KNT9 176 aa21.09■□□□□ 0.97
CDKN2A-201ENST00000304494 FBLN7Q53RD9 439 aa21.09■□□□□ 0.97
CDKN2A-201ENST00000304494 ZNF554Q86TJ5 538 aa21.09■□□□□ 0.97
CDKN2A-201ENST00000304494 PRR18Q8N4B5 295 aa21.09■□□□□ 0.97
CDKN2A-201ENST00000304494 KCNIP1Q9NZI2 227 aa21.09■□□□□ 0.97
CDKN2A-201ENST00000304494 GNG12Q9UBI6 72 aa21.09■□□□□ 0.97
CDKN2A-201ENST00000304494 IGHV3-43A0A0B4J1X8 118 aa21.08■□□□□ 0.97
CDKN2A-201ENST00000304494 ATP6V1G2O95670 118 aa21.08■□□□□ 0.97
CDKN2A-201ENST00000304494 BPNT1O95861 308 aa21.08■□□□□ 0.97
CDKN2A-201ENST00000304494 HBZP02008 142 aa21.08■□□□□ 0.97
CDKN2A-201ENST00000304494 LPLP06858 475 aa21.08■□□□□ 0.97
CDKN2A-201ENST00000304494 IGHV3-43DP0DP04 118 aa21.08■□□□□ 0.97
CDKN2A-201ENST00000304494 EMX1Q04741 257 aaPredicted RBP21.08■□□□□ 0.97
CDKN2A-201ENST00000304494 TBCEQ15813 527 aaPredicted RBP21.08■□□□□ 0.97
CDKN2A-201ENST00000304494 NKAPLQ5M9Q1 402 aa21.08■□□□□ 0.97
CDKN2A-201ENST00000304494 HIST2H2BDQ6DRA6 164 aa21.08■□□□□ 0.97
CDKN2A-201ENST00000304494 TMEM91Q6ZNR0 172 aa21.08■□□□□ 0.97
CDKN2A-201ENST00000304494 NDUFA11Q86Y39 141 aa21.08■□□□□ 0.97
CDKN2A-201ENST00000304494 MBNL3Q9NUK0 354 aaKnown RBP21.08■□□□□ 0.97
CDKN2A-201ENST00000304494 AMY1AP04745 511 aa21.07■□□□□ 0.96
CDKN2A-201ENST00000304494 AMY2AP04746 511 aa21.07■□□□□ 0.96
CDKN2A-201ENST00000304494 TMEM11P17152 192 aa21.07■□□□□ 0.96
CDKN2A-201ENST00000304494 RCC1P18754 421 aaPredicted RBP21.07■□□□□ 0.96
CDKN2A-201ENST00000304494 MAP2K4P45985 399 aa21.07■□□□□ 0.96
CDKN2A-201ENST00000304494 DEFA6Q01524 100 aa21.07■□□□□ 0.96
CDKN2A-201ENST00000304494 OR10K2Q6IF99 312 aa21.07■□□□□ 0.96
CDKN2A-201ENST00000304494 TM2D1Q9BX74 207 aa21.07■□□□□ 0.96
CDKN2A-201ENST00000304494 TAF9BQ9HBM6 251 aa21.07■□□□□ 0.96
CDKN2A-201ENST00000304494 ACOT13Q9NPJ3 140 aa21.07■□□□□ 0.96
CDKN2A-201ENST00000304494 IGHV1-3A0A0C4DH29 117 aa21.06■□□□□ 0.96
CDKN2A-201ENST00000304494 WIPF1O43516 503 aa21.06■□□□□ 0.96
CDKN2A-201ENST00000304494 CHATP28329 748 aa21.06■□□□□ 0.96
CDKN2A-201ENST00000304494 RANBP1P43487 201 aa21.06■□□□□ 0.96
CDKN2A-201ENST00000304494 NSUN5P1Q3KNT7 163 aa21.06■□□□□ 0.96
CDKN2A-201ENST00000304494 ZNF367Q7RTV3 350 aa21.06■□□□□ 0.96
CDKN2A-201ENST00000304494 CENPVQ7Z7K6 275 aaPredicted RBP21.06■□□□□ 0.96
CDKN2A-201ENST00000304494 MOB3BQ86TA1 216 aa21.06■□□□□ 0.96
CDKN2A-201ENST00000304494 OR5AU1Q8NGC0 362 aa21.06■□□□□ 0.96
CDKN2A-201ENST00000304494 CITED2Q99967 270 aaPredicted RBP21.06■□□□□ 0.96
CDKN2A-201ENST00000304494 PLGRKTQ9HBL7 147 aa21.06■□□□□ 0.96
CDKN2A-201ENST00000304494 TMEM14DPA8MWL7 114 aa21.05■□□□□ 0.96
CDKN2A-201ENST00000304494 IGKV1D-33P01593 117 aa21.05■□□□□ 0.96
CDKN2A-201ENST00000304494 IGKV1-33P01594 117 aa21.05■□□□□ 0.96
CDKN2A-201ENST00000304494 OPN1MWP04001 364 aa21.05■□□□□ 0.96
CDKN2A-201ENST00000304494 OPN1MW2P0DN77 364 aa21.05■□□□□ 0.96
CDKN2A-201ENST00000304494 OPN1MW3P0DN78 364 aa21.05■□□□□ 0.96
CDKN2A-201ENST00000304494 REG1BP48304 166 aa21.05■□□□□ 0.96
CDKN2A-201ENST00000304494 UNC119Q13432 240 aa21.05■□□□□ 0.96
CDKN2A-201ENST00000304494 C9orf152Q5JTZ5 239 aa21.05■□□□□ 0.96
CDKN2A-201ENST00000304494 SLC25A48Q6ZT89 311 aaKnown RBP21.05■□□□□ 0.96
CDKN2A-201ENST00000304494 OR1L1Q8NH94 360 aa21.05■□□□□ 0.96
CDKN2A-201ENST00000304494 MRPL30Q8TCC3 161 aaKnown RBP21.05■□□□□ 0.96
CDKN2A-201ENST00000304494 WNK1Q9H4A3 2382 aa21.05■□□□□ 0.96
CDKN2A-201ENST00000304494 SLC17A2O00624 439 aa21.04■□□□□ 0.96
CDKN2A-201ENST00000304494 TXNL1O43396 289 aa21.04■□□□□ 0.96
CDKN2A-201ENST00000304494 ARSBP15848 533 aa21.04■□□□□ 0.96
CDKN2A-201ENST00000304494 CALRP27797 417 aaKnown RBP21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms