RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 SEMA4FO95754 770 aa12.43□□□□□ -0.42
CDT1-201ENST00000301019 CISD3P0C7P0 127 aa12.43□□□□□ -0.42
CDT1-201ENST00000301019 ZNF77Q15935 545 aa12.43□□□□□ -0.42
CDT1-201ENST00000301019 OR10V1Q8NGI7 309 aa12.43□□□□□ -0.42
CDT1-201ENST00000301019 KIAA1324LA8MWY0 1029 aaPredicted RBP12.43□□□□□ -0.42
CDT1-201ENST00000301019 PITX3O75364 302 aa12.43□□□□□ -0.42
CDT1-201ENST00000301019 IL33O95760 270 aa12.43□□□□□ -0.42
CDT1-201ENST00000301019 KCNMB1Q16558 191 aa12.43□□□□□ -0.42
CDT1-201ENST00000301019 SGCBQ16585 318 aa12.43□□□□□ -0.42
CDT1-201ENST00000301019 HLA-BQ31612 363 aa12.43□□□□□ -0.42
CDT1-201ENST00000301019 ACTL10Q5JWF8 245 aa12.43□□□□□ -0.42
CDT1-201ENST00000301019 SPANXN5Q5MJ07 72 aa12.43□□□□□ -0.42
CDT1-201ENST00000301019 TBC1D26Q86UD7 250 aa12.43□□□□□ -0.42
CDT1-201ENST00000301019 SGMS2Q8NHU3 365 aa12.43□□□□□ -0.42
CDT1-201ENST00000301019 RNF133Q8WVZ7 376 aa12.43□□□□□ -0.42
CDT1-201ENST00000301019 STARD4Q96DR4 205 aa12.43□□□□□ -0.42
CDT1-201ENST00000301019 ZNF442Q9H7R0 627 aa12.43□□□□□ -0.42
CDT1-201ENST00000301019 PIGLQ9Y2B2 252 aa12.43□□□□□ -0.42
CDT1-201ENST00000301019 PAGE4O60829 102 aa12.43□□□□□ -0.42
CDT1-201ENST00000301019 TDHQ8IZJ6 230 aa12.43□□□□□ -0.42
CDT1-201ENST00000301019 FAM122AQ96E09 287 aa12.43□□□□□ -0.42
CDT1-201ENST00000301019 GNPNAT1Q96EK6 184 aaPredicted RBP12.43□□□□□ -0.42
CDT1-201ENST00000301019 NECAP2Q9NVZ3 263 aa12.43□□□□□ -0.42
CDT1-201ENST00000301019 A0A1B0GW64 132 aa12.42□□□□□ -0.42
CDT1-201ENST00000301019 GPR3P46089 330 aa12.42□□□□□ -0.42
CDT1-201ENST00000301019 TAS2R30P59541 319 aa12.42□□□□□ -0.42
CDT1-201ENST00000301019 SUMO1P63165 101 aaKnown RBP12.42□□□□□ -0.42
CDT1-201ENST00000301019 ARL16Q0P5N6 197 aa12.42□□□□□ -0.42
CDT1-201ENST00000301019 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.42□□□□□ -0.42
CDT1-201ENST00000301019 FAM131CQ96AQ9 280 aa12.42□□□□□ -0.42
CDT1-201ENST00000301019 ZNF501Q96CX3 271 aaPredicted RBP12.42□□□□□ -0.42
CDT1-201ENST00000301019 C18orf12Q96KH6 178 aa12.42□□□□□ -0.42
CDT1-201ENST00000301019 HIPK2Q9H2X6 1198 aa12.42□□□□□ -0.42
CDT1-201ENST00000301019 KIR3DX1Q9H7L2 352 aa12.42□□□□□ -0.42
CDT1-201ENST00000301019 LYRM2Q9NU23 88 aaPredicted RBP12.42□□□□□ -0.42
CDT1-201ENST00000301019 LAMTOR2Q9Y2Q5 125 aa12.42□□□□□ -0.42
CDT1-201ENST00000301019 DIRC3C9JPN6 131 aa12.42□□□□□ -0.42
CDT1-201ENST00000301019 OR7C1O76099 320 aaPredicted RBP12.42□□□□□ -0.42
CDT1-201ENST00000301019 CELA2BP08218 269 aaPredicted RBP12.42□□□□□ -0.42
CDT1-201ENST00000301019 TDGF1P13385 188 aa12.42□□□□□ -0.42
CDT1-201ENST00000301019 OR5D13Q8NGL4 314 aa12.42□□□□□ -0.42
CDT1-201ENST00000301019 OR4D5Q8NGN0 318 aa12.42□□□□□ -0.42
CDT1-201ENST00000301019 NT5CQ8TCD5 201 aa12.42□□□□□ -0.42
CDT1-201ENST00000301019 RHBDD1Q8TEB9 315 aa12.42□□□□□ -0.42
CDT1-201ENST00000301019 TM4SF19Q96DZ7 209 aa12.42□□□□□ -0.42
CDT1-201ENST00000301019 SMDT1Q9H4I9 107 aa12.42□□□□□ -0.42
CDT1-201ENST00000301019 IGHV3-20A0A0C4DH32 117 aa12.41□□□□□ -0.42
CDT1-201ENST00000301019 PSG1P11464 419 aa12.41□□□□□ -0.42
CDT1-201ENST00000301019 RABIFP47224 123 aa12.41□□□□□ -0.42
CDT1-201ENST00000301019 ACOT6Q3I5F7 207 aaPredicted RBP12.41□□□□□ -0.42
CDT1-201ENST00000301019 SPINK9Q5DT21 86 aa12.41□□□□□ -0.42
CDT1-201ENST00000301019 LYRM4Q9HD34 91 aa12.41□□□□□ -0.42
CDT1-201ENST00000301019 A0A0G2JRQ6 117 aa12.41□□□□□ -0.42
CDT1-201ENST00000301019 A0A1W2PNR3 127 aa12.41□□□□□ -0.42
CDT1-201ENST00000301019 PRSS38A1L453 326 aa12.41□□□□□ -0.42
CDT1-201ENST00000301019 SLC17A3O00476 420 aa12.41□□□□□ -0.42
CDT1-201ENST00000301019 OTX1P32242 354 aaPredicted RBP12.41□□□□□ -0.42
CDT1-201ENST00000301019 MPLP40238 635 aa12.41□□□□□ -0.42
CDT1-201ENST00000301019 SELENOTP62341 195 aa12.41□□□□□ -0.42
CDT1-201ENST00000301019 TMEM52BQ4KMG9 183 aa12.41□□□□□ -0.42
CDT1-201ENST00000301019 GAPTQ8N292 157 aa12.41□□□□□ -0.42
CDT1-201ENST00000301019 OR5AU1Q8NGC0 362 aa12.41□□□□□ -0.42
CDT1-201ENST00000301019 CISD1Q9NZ45 108 aaKnown RBP12.41□□□□□ -0.42
CDT1-201ENST00000301019 FBXL7Q9UJT9 491 aa12.41□□□□□ -0.42
CDT1-201ENST00000301019 TIMM8BQ9Y5J9 83 aaPredicted RBP12.41□□□□□ -0.42
CDT1-201ENST00000301019 TRAV39A0A0B4J263 110 aa12.41□□□□□ -0.42
CDT1-201ENST00000301019 LINC01565O15544 149 aa12.41□□□□□ -0.42
CDT1-201ENST00000301019 IGKV1D-33P01593 117 aa12.41□□□□□ -0.42
CDT1-201ENST00000301019 IGKV1-33P01594 117 aa12.41□□□□□ -0.42
CDT1-201ENST00000301019 CDKN1BP46527 198 aa12.41□□□□□ -0.42
CDT1-201ENST00000301019 MEF2BQ02080 365 aaPredicted RBP12.41□□□□□ -0.42
CDT1-201ENST00000301019 C16orf54Q6UWD8 224 aa12.41□□□□□ -0.42
CDT1-201ENST00000301019 TMEM108Q6UXF1 575 aa12.41□□□□□ -0.42
CDT1-201ENST00000301019 ARHGEF39Q8N4T4 335 aa12.41□□□□□ -0.42
CDT1-201ENST00000301019 APOOQ9BUR5 198 aa12.41□□□□□ -0.42
CDT1-201ENST00000301019 SLC7A10Q9NS82 523 aa12.41□□□□□ -0.42
CDT1-201ENST00000301019 LHFPL6Q9Y693 200 aa12.41□□□□□ -0.42
CDT1-201ENST00000301019 ATG2AQ2TAZ0 1938 aa12.4□□□□□ -0.42
CDT1-201ENST00000301019 HNRNPA2B1P22626 353 aaKnown RBP12.4□□□□□ -0.42
CDT1-201ENST00000301019 LHX2P50458 406 aa12.4□□□□□ -0.42
CDT1-201ENST00000301019 HYAL1Q12794 435 aa12.4□□□□□ -0.42
CDT1-201ENST00000301019 ARL6IP1Q15041 203 aa12.4□□□□□ -0.42
CDT1-201ENST00000301019 ZNF114Q8NC26 417 aa12.4□□□□□ -0.42
CDT1-201ENST00000301019 DOCK7Q96N67 2140 aa12.4□□□□□ -0.42
CDT1-201ENST00000301019 MPPED1O15442 326 aa12.4□□□□□ -0.42
CDT1-201ENST00000301019 DTYMKP23919 212 aa12.4□□□□□ -0.42
CDT1-201ENST00000301019 CLRN1P58418 232 aa12.4□□□□□ -0.42
CDT1-201ENST00000301019 RELBQ01201 579 aa12.4□□□□□ -0.42
CDT1-201ENST00000301019 CST6Q15828 149 aa12.4□□□□□ -0.42
CDT1-201ENST00000301019 HOXB13Q92826 284 aaPredicted RBP12.4□□□□□ -0.42
CDT1-201ENST00000301019 SGCZQ96LD1 299 aa12.4□□□□□ -0.42
CDT1-201ENST00000301019 REPIN1Q9BWE0 567 aaKnown RBP12.4□□□□□ -0.42
CDT1-201ENST00000301019 ZNF891A8MT65 544 aaPredicted RBP12.39□□□□□ -0.43
CDT1-201ENST00000301019 MS4A18H0YCH9 400 aa12.39□□□□□ -0.43
CDT1-201ENST00000301019 MS4A18Q3C1V0 323 aa12.39□□□□□ -0.43
CDT1-201ENST00000301019 FBLN7Q53RD9 439 aa12.39□□□□□ -0.43
CDT1-201ENST00000301019 NUDT10Q8NFP7 164 aa12.39□□□□□ -0.43
CDT1-201ENST00000301019 ANGPTL4Q9BY76 406 aa12.39□□□□□ -0.43
CDT1-201ENST00000301019 LNP1A1A4G5 178 aa12.39□□□□□ -0.43
CDT1-201ENST00000301019 CRISP2P16562 243 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms