RNA–Protein interactions for RNA: ENST00000299162.9

FOXN4-201, Transcript of forkhead box N4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXN4, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-201ENST00000299162 ZNF766Q5HY98 468 aa8.67□□□□□ -1.02
FOXN4-201ENST00000299162 HIST2H3PS2Q5TEC6 136 aa8.67□□□□□ -1.02
FOXN4-201ENST00000299162 FAM89BQ8N5H3 189 aa8.67□□□□□ -1.02
FOXN4-201ENST00000299162 HIST1H2AAQ96QV6 131 aa8.67□□□□□ -1.02
FOXN4-201ENST00000299162 INTS1Q8N201 2190 aaKnown RBP8.67□□□□□ -1.02
FOXN4-201ENST00000299162 TGIF2-C20orf24A0A0A6YYL0 155 aa8.67□□□□□ -1.02
FOXN4-201ENST00000299162 MMP7P09237 267 aaPredicted RBP8.67□□□□□ -1.02
FOXN4-201ENST00000299162 ZNF728P0DKX0 622 aa8.67□□□□□ -1.02
FOXN4-201ENST00000299162 RBX1P62877 108 aa8.67□□□□□ -1.02
FOXN4-201ENST00000299162 VAX1Q5SQQ9 334 aa8.67□□□□□ -1.02
FOXN4-201ENST00000299162 LHFPL2Q6ZUX7 228 aa8.67□□□□□ -1.02
FOXN4-201ENST00000299162 RNASE8Q8TDE3 154 aaKnown RBP8.67□□□□□ -1.02
FOXN4-201ENST00000299162 SSC4DQ8WTU2 575 aa8.67□□□□□ -1.02
FOXN4-201ENST00000299162 ERGIC1Q969X5 290 aa8.67□□□□□ -1.02
FOXN4-201ENST00000299162 KLRC4-KLRK1H3BQV0 150 aa8.67□□□□□ -1.02
FOXN4-201ENST00000299162 PHF1O43189 567 aaPredicted RBP8.67□□□□□ -1.02
FOXN4-201ENST00000299162 IGLV3-1P01715 115 aa8.67□□□□□ -1.02
FOXN4-201ENST00000299162 HERV-K104P61576 105 aa8.67□□□□□ -1.02
FOXN4-201ENST00000299162 PRSS54Q6PEW0 395 aa8.67□□□□□ -1.02
FOXN4-201ENST00000299162 LYZL2Q7Z4W2 148 aa8.67□□□□□ -1.02
FOXN4-201ENST00000299162 ZFP62Q8NB50 900 aaPredicted RBP8.67□□□□□ -1.02
FOXN4-201ENST00000299162 HPSE2Q8WWQ2 592 aa8.67□□□□□ -1.02
FOXN4-201ENST00000299162 RTN4IP1Q8WWV3 396 aaPredicted RBP8.67□□□□□ -1.02
FOXN4-201ENST00000299162 SNX22Q96L94 193 aa8.67□□□□□ -1.02
FOXN4-201ENST00000299162 SNHG12Q9BXW3 62 aa8.67□□□□□ -1.02
FOXN4-201ENST00000299162 GPR87Q9BY21 358 aa8.67□□□□□ -1.02
FOXN4-201ENST00000299162 BCO1Q9HAY6 547 aa8.67□□□□□ -1.02
FOXN4-201ENST00000299162 PLA2G2EQ9NZK7 142 aa8.67□□□□□ -1.02
FOXN4-201ENST00000299162 OSGIN2Q9Y236 505 aa8.67□□□□□ -1.02
FOXN4-201ENST00000299162 ZNF292O60281 2723 aa8.66□□□□□ -1.02
FOXN4-201ENST00000299162 TRGV5A0A0B4J1U4 118 aa8.66□□□□□ -1.02
FOXN4-201ENST00000299162 H0YL77 283 aa8.66□□□□□ -1.02
FOXN4-201ENST00000299162 AGFG2O95081 481 aa8.66□□□□□ -1.02
FOXN4-201ENST00000299162 IFNA10P01566 189 aa8.66□□□□□ -1.02
FOXN4-201ENST00000299162 IL2RAP01589 272 aa8.66□□□□□ -1.02
FOXN4-201ENST00000299162 TFF1P04155 84 aa8.66□□□□□ -1.02
FOXN4-201ENST00000299162 FUT6P51993 359 aa8.66□□□□□ -1.02
FOXN4-201ENST00000299162 FOXL2NBQ6ZUU3 175 aa8.66□□□□□ -1.02
FOXN4-201ENST00000299162 TMEM217Q8N7C4 229 aa8.66□□□□□ -1.02
FOXN4-201ENST00000299162 FER1L6-AS2Q96M78 137 aa8.66□□□□□ -1.02
FOXN4-201ENST00000299162 TRIB1Q96RU8 372 aa8.66□□□□□ -1.02
FOXN4-201ENST00000299162 TMEM100Q9NV29 134 aa8.66□□□□□ -1.02
FOXN4-201ENST00000299162 HSF4Q9ULV5 492 aa8.66□□□□□ -1.02
FOXN4-201ENST00000299162 ARHGAP21Q5T5U3 1957 aa8.66□□□□□ -1.02
FOXN4-201ENST00000299162 SLC22A20A6NK97 555 aa8.66□□□□□ -1.02
FOXN4-201ENST00000299162 HSD17B6O14756 317 aa8.66□□□□□ -1.02
FOXN4-201ENST00000299162 SMPD2O60906 423 aa8.66□□□□□ -1.02
FOXN4-201ENST00000299162 ZNF708P17019 499 aa8.66□□□□□ -1.02
FOXN4-201ENST00000299162 TBPP20226 339 aa8.66□□□□□ -1.02
FOXN4-201ENST00000299162 HOXA5P20719 270 aa8.66□□□□□ -1.02
FOXN4-201ENST00000299162 CHATP28329 748 aa8.66□□□□□ -1.02
FOXN4-201ENST00000299162 APLNRP35414 380 aa8.66□□□□□ -1.02
FOXN4-201ENST00000299162 EIF5AP63241 154 aaKnown RBP8.66□□□□□ -1.02
FOXN4-201ENST00000299162 FDCSPQ8NFU4 85 aa8.66□□□□□ -1.02
FOXN4-201ENST00000299162 OR5T1Q8NG75 326 aa8.66□□□□□ -1.02
FOXN4-201ENST00000299162 OR1J1Q8NGS3 322 aa8.66□□□□□ -1.02
FOXN4-201ENST00000299162 EXTL1Q92935 676 aa8.66□□□□□ -1.02
FOXN4-201ENST00000299162 WFIKKN1Q96NZ8 548 aa8.66□□□□□ -1.02
FOXN4-201ENST00000299162 SPRY4Q9C004 299 aa8.66□□□□□ -1.02
FOXN4-201ENST00000299162 SPRR3Q9UBC9 169 aa8.66□□□□□ -1.02
FOXN4-201ENST00000299162 KCNIP3Q9Y2W7 256 aa8.66□□□□□ -1.02
FOXN4-201ENST00000299162 MRPS18CQ9Y3D5 142 aaKnown RBP8.66□□□□□ -1.02
FOXN4-201ENST00000299162 PLCE1Q9P212 2302 aa8.66□□□□□ -1.02
FOXN4-201ENST00000299162 RELNP78509 3460 aa8.66□□□□□ -1.02
FOXN4-201ENST00000299162 KIAA1549Q9HCM3 1950 aa8.66□□□□□ -1.02
FOXN4-201ENST00000299162 RHBDL1O75783 438 aa8.65□□□□□ -1.02
FOXN4-201ENST00000299162 CNOT4O95628 575 aaKnown RBP8.65□□□□□ -1.02
FOXN4-201ENST00000299162 GRPP07492 148 aa8.65□□□□□ -1.02
FOXN4-201ENST00000299162 SCTP09683 121 aa8.65□□□□□ -1.02
FOXN4-201ENST00000299162 AADACP22760 399 aa8.65□□□□□ -1.02
FOXN4-201ENST00000299162 ZNF133P52736 654 aaPredicted RBP8.65□□□□□ -1.02
FOXN4-201ENST00000299162 BATFQ16520 125 aa8.65□□□□□ -1.02
FOXN4-201ENST00000299162 SLC25A24Q6NUK1 477 aa8.65□□□□□ -1.02
FOXN4-201ENST00000299162 MDP1Q86V88 176 aa8.65□□□□□ -1.02
FOXN4-201ENST00000299162 SCGB3A2Q96PL1 93 aa8.65□□□□□ -1.02
FOXN4-201ENST00000299162 SLC5A7Q9GZV3 580 aa8.65□□□□□ -1.02
FOXN4-201ENST00000299162 MAGT1Q9H0U3 335 aa8.65□□□□□ -1.02
FOXN4-201ENST00000299162 NECAP2Q9NVZ3 263 aa8.65□□□□□ -1.02
FOXN4-201ENST00000299162 FBLN5Q9UBX5 448 aa8.65□□□□□ -1.02
FOXN4-201ENST00000299162 OR14J1Q9UGF5 321 aa8.65□□□□□ -1.02
FOXN4-201ENST00000299162 ZNF107Q9UII5 783 aaPredicted RBP8.65□□□□□ -1.02
FOXN4-201ENST00000299162 RBM7Q9Y580 266 aaKnown RBP8.65□□□□□ -1.02
FOXN4-201ENST00000299162 A8MWP6 167 aa8.65□□□□□ -1.02
FOXN4-201ENST00000299162 C21orf140B9A014 251 aa8.65□□□□□ -1.02
FOXN4-201ENST00000299162 DNPH1O43598 174 aa8.65□□□□□ -1.02
FOXN4-201ENST00000299162 SOD3P08294 240 aa8.65□□□□□ -1.02
FOXN4-201ENST00000299162 WT1P19544 449 aaPredicted RBP8.65□□□□□ -1.02
FOXN4-201ENST00000299162 RPS23P62266 143 aaKnown RBP8.65□□□□□ -1.02
FOXN4-201ENST00000299162 DEFB109BQ30KR1 87 aa8.65□□□□□ -1.02
FOXN4-201ENST00000299162 KHDC3LQ587J8 217 aa8.65□□□□□ -1.02
FOXN4-201ENST00000299162 GGNBP1Q5YKI7 109 aa8.65□□□□□ -1.02
FOXN4-201ENST00000299162 NECAP1Q8NC96 275 aa8.65□□□□□ -1.02
FOXN4-201ENST00000299162 FGF23Q9GZV9 251 aaPredicted RBP8.65□□□□□ -1.02
FOXN4-201ENST00000299162 KLF13Q9Y2Y9 288 aaPredicted RBP8.65□□□□□ -1.02
FOXN4-201ENST00000299162 NCOR2Q9Y618 2525 aa8.65□□□□□ -1.02
FOXN4-201ENST00000299162 CHD8Q9HCK8 2581 aa8.65□□□□□ -1.02
FOXN4-201ENST00000299162 CD300LBA8K4G0 201 aa8.65□□□□□ -1.03
FOXN4-201ENST00000299162 TRAPPC2LH3BP13 241 aa8.65□□□□□ -1.03
FOXN4-201ENST00000299162 IFNA21P01568 189 aa8.65□□□□□ -1.03
FOXN4-201ENST00000299162 CD5P06127 495 aa8.65□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms