RNA–Protein interactions for RNA: ENST00000297316.4

SOX17-201, Transcript of SRY-box 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX17, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17-201ENST00000297316 DIRAS3O95661 229 aa17.95■□□□□ 0.46
SOX17-201ENST00000297316 PTBP3O95758 552 aaKnown RBP17.95■□□□□ 0.46
SOX17-201ENST00000297316 HAND1O96004 215 aa17.95■□□□□ 0.46
SOX17-201ENST00000297316 LYL1P12980 280 aa17.95■□□□□ 0.46
SOX17-201ENST00000297316 ATF4P18848 351 aaPredicted RBP17.95■□□□□ 0.46
SOX17-201ENST00000297316 LUMP51884 338 aaPredicted RBP17.95■□□□□ 0.46
SOX17-201ENST00000297316 PRSS54Q6PEW0 395 aa17.95■□□□□ 0.46
SOX17-201ENST00000297316 LIAT1Q6ZQX7 453 aa17.95■□□□□ 0.46
SOX17-201ENST00000297316 HSD17B13Q7Z5P4 300 aaPredicted RBP17.95■□□□□ 0.46
SOX17-201ENST00000297316 STPG2Q8N412 459 aa17.95■□□□□ 0.46
SOX17-201ENST00000297316 KIRREL1Q96J84 757 aa17.95■□□□□ 0.46
SOX17-201ENST00000297316 PHF1O43189 567 aaPredicted RBP17.94■□□□□ 0.46
SOX17-201ENST00000297316 EGR1P18146 543 aa17.94■□□□□ 0.46
SOX17-201ENST00000297316 S100A10P60903 97 aa17.94■□□□□ 0.46
SOX17-201ENST00000297316 ACP7Q6ZNF0 438 aa17.94■□□□□ 0.46
SOX17-201ENST00000297316 FOXRED2Q8IWF2 684 aa17.94■□□□□ 0.46
SOX17-201ENST00000297316 GAPTQ8N292 157 aa17.94■□□□□ 0.46
SOX17-201ENST00000297316 INO80EQ8NBZ0 244 aaPredicted RBP17.94■□□□□ 0.46
SOX17-201ENST00000297316 LRRC29Q8WV35 223 aa17.94■□□□□ 0.46
SOX17-201ENST00000297316 USB1Q9BQ65 265 aaKnown RBP17.94■□□□□ 0.46
SOX17-201ENST00000297316 OR1A1Q9P1Q5 309 aa17.94■□□□□ 0.46
SOX17-201ENST00000297316 ARID1AO14497 2285 aa17.94■□□□□ 0.46
SOX17-201ENST00000297316 MPPED1O15442 326 aa17.94■□□□□ 0.46
SOX17-201ENST00000297316 ACAA1P09110 424 aaPredicted RBP17.94■□□□□ 0.46
SOX17-201ENST00000297316 RPS23P62266 143 aaKnown RBP17.94■□□□□ 0.46
SOX17-201ENST00000297316 C18orf12Q96KH6 178 aa17.94■□□□□ 0.46
SOX17-201ENST00000297316 SUCNR1Q9BXA5 334 aa17.94■□□□□ 0.46
SOX17-201ENST00000297316 CCL28Q9NRJ3 127 aa17.94■□□□□ 0.46
SOX17-201ENST00000297316 METRNQ9UJH8 293 aa17.94■□□□□ 0.46
SOX17-201ENST00000297316 HIVEP3Q5T1R4 2406 aa17.94■□□□□ 0.46
SOX17-201ENST00000297316 HSD17B6O14756 317 aa17.93■□□□□ 0.46
SOX17-201ENST00000297316 SH2D1BO14796 132 aa17.93■□□□□ 0.46
SOX17-201ENST00000297316 CD200P41217 278 aa17.93■□□□□ 0.46
SOX17-201ENST00000297316 ASCL1P50553 236 aa17.93■□□□□ 0.46
SOX17-201ENST00000297316 SPIN3Q5JUX0 258 aa17.93■□□□□ 0.46
SOX17-201ENST00000297316 BOLLQ8N9W6 283 aaKnown RBP17.93■□□□□ 0.46
SOX17-201ENST00000297316 NUP37Q8NFH4 326 aa17.93■□□□□ 0.46
SOX17-201ENST00000297316 OR4A4PQ8NGN8 299 aa17.93■□□□□ 0.46
SOX17-201ENST00000297316 LINC01560Q8TB33 94 aa17.93■□□□□ 0.46
SOX17-201ENST00000297316 ITLN1Q8WWA0 313 aa17.93■□□□□ 0.46
SOX17-201ENST00000297316 SLC5A7Q9GZV3 580 aa17.93■□□□□ 0.46
SOX17-201ENST00000297316 UBA52P62987 128 aaKnown RBP17.93■□□□□ 0.46
SOX17-201ENST00000297316 SHEQ5VZ18 495 aa17.93■□□□□ 0.46
SOX17-201ENST00000297316 TBC1D26Q86UD7 250 aa17.93■□□□□ 0.46
SOX17-201ENST00000297316 MOGAT3Q86VF5 341 aa17.93■□□□□ 0.46
SOX17-201ENST00000297316 PRR18Q8N4B5 295 aa17.93■□□□□ 0.46
SOX17-201ENST00000297316 LRTM2Q8N967 370 aa17.93■□□□□ 0.46
SOX17-201ENST00000297316 CCDC71LQ8N9Z2 235 aa17.93■□□□□ 0.46
SOX17-201ENST00000297316 IL1F10Q8WWZ1 152 aa17.93■□□□□ 0.46
SOX17-201ENST00000297316 MEGF10Q96KG7 1140 aa17.93■□□□□ 0.46
SOX17-201ENST00000297316 CABLES2Q9BTV7 478 aa17.93■□□□□ 0.46
SOX17-201ENST00000297316 ZNF471Q9BX82 626 aaPredicted RBP17.93■□□□□ 0.46
SOX17-201ENST00000297316 CTXN2P0C2S0 81 aa17.92■□□□□ 0.46
SOX17-201ENST00000297316 MDH2P40926 338 aaKnown RBP17.92■□□□□ 0.46
SOX17-201ENST00000297316 EIF4E3Q8N5X7 224 aaKnown RBP17.92■□□□□ 0.46
SOX17-201ENST00000297316 NEUROG1Q92886 237 aa17.92■□□□□ 0.46
SOX17-201ENST00000297316 SLC25A32Q9H2D1 315 aa17.92■□□□□ 0.46
SOX17-201ENST00000297316 TREM2Q9NZC2 230 aa17.92■□□□□ 0.46
SOX17-201ENST00000297316 C3orf85A0A1B0GTC6 90 aa17.92■□□□□ 0.46
SOX17-201ENST00000297316 TRIM77I1YAP6 450 aa17.92■□□□□ 0.46
SOX17-201ENST00000297316 CHRNB4P30926 498 aa17.92■□□□□ 0.46
SOX17-201ENST00000297316 ADIPOQQ15848 244 aa17.92■□□□□ 0.46
SOX17-201ENST00000297316 FAM74A1Q5RGS3 127 aa17.92■□□□□ 0.46
SOX17-201ENST00000297316 MEX3BQ6ZN04 569 aaKnown RBP17.92■□□□□ 0.46
SOX17-201ENST00000297316 H1FOOQ8IZA3 346 aaPredicted RBP17.92■□□□□ 0.46
SOX17-201ENST00000297316 ZCCHC24Q8N2G6 241 aaKnown RBP17.92■□□□□ 0.46
SOX17-201ENST00000297316 ZNF565Q8N9K5 539 aa17.92■□□□□ 0.46
SOX17-201ENST00000297316 PCDHB10Q9UN67 800 aa17.92■□□□□ 0.46
SOX17-201ENST00000297316 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP17.91■□□□□ 0.46
SOX17-201ENST00000297316 IFNA21P01568 189 aa17.91■□□□□ 0.46
SOX17-201ENST00000297316 TRAPPC2LQ9UL33 140 aa17.91■□□□□ 0.46
SOX17-201ENST00000297316 GPR31O00270 319 aa17.9■□□□□ 0.46
SOX17-201ENST00000297316 IGHV1-46P01743 117 aa17.9■□□□□ 0.46
SOX17-201ENST00000297316 OR4A8P0C604 315 aa17.9■□□□□ 0.46
SOX17-201ENST00000297316 FAM201AQ5SY85 155 aa17.9■□□□□ 0.46
SOX17-201ENST00000297316 OR10J5Q8NHC4 309 aa17.9■□□□□ 0.46
SOX17-201ENST00000297316 CNTNAP3BQ96NU0 1288 aa17.9■□□□□ 0.46
SOX17-201ENST00000297316 CNTNAP3Q9BZ76 1288 aa17.9■□□□□ 0.46
SOX17-201ENST00000297316 IGHV3OR15-7A0A075B7D8 119 aa17.9■□□□□ 0.46
SOX17-201ENST00000297316 F5H0A9 414 aaPredicted RBP17.9■□□□□ 0.46
SOX17-201ENST00000297316 H7C1Q1 480 aa17.9■□□□□ 0.46
SOX17-201ENST00000297316 TNFSF12O43508 249 aa17.9■□□□□ 0.46
SOX17-201ENST00000297316 DSCAMO60469 2012 aa17.9■□□□□ 0.46
SOX17-201ENST00000297316 SFTPCP11686 197 aa17.9■□□□□ 0.46
SOX17-201ENST00000297316 PLA2G5P39877 138 aa17.9■□□□□ 0.46
SOX17-201ENST00000297316 SELENOVP59797 346 aa17.9■□□□□ 0.46
SOX17-201ENST00000297316 RND3P61587 244 aa17.9■□□□□ 0.46
SOX17-201ENST00000297316 LGI3Q8N145 548 aa17.9■□□□□ 0.46
SOX17-201ENST00000297316 SLC35G3Q8N808 338 aa17.9■□□□□ 0.46
SOX17-201ENST00000297316 PARP12Q9H0J9 701 aaKnown RBP17.9■□□□□ 0.46
SOX17-201ENST00000297316 TGIF2LYQ8IUE0 185 aa17.89■□□□□ 0.46
SOX17-201ENST00000297316 GCSAMQ8N6F7 178 aa17.89■□□□□ 0.46
SOX17-201ENST00000297316 PLPPR2Q96GM1 343 aa17.89■□□□□ 0.46
SOX17-201ENST00000297316 CYTL1Q9NRR1 136 aa17.89■□□□□ 0.46
SOX17-201ENST00000297316 MBNL3Q9NUK0 354 aaKnown RBP17.89■□□□□ 0.46
SOX17-201ENST00000297316 ERRFI1Q9UJM3 462 aaPredicted RBP17.89■□□□□ 0.46
SOX17-201ENST00000297316 OR2W1Q9Y3N9 320 aa17.89■□□□□ 0.46
SOX17-201ENST00000297316 DYSFO75923 2080 aa17.89■□□□□ 0.45
SOX17-201ENST00000297316 SCGB1D2O95969 90 aa17.89■□□□□ 0.45
SOX17-201ENST00000297316 LMO1P25800 156 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms