RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 SOX15O60248 233 aa7.91□□□□□ -1.14
PRDM9-201ENST00000296682 METTL15P1P0C7V9 234 aa7.91□□□□□ -1.14
PRDM9-201ENST00000296682 PTAFRP25105 342 aa7.91□□□□□ -1.14
PRDM9-201ENST00000296682 PPP1CCP36873 323 aaKnown RBP7.91□□□□□ -1.14
PRDM9-201ENST00000296682 PMELP40967 661 aa7.91□□□□□ -1.14
PRDM9-201ENST00000296682 LPAR6P43657 344 aa7.91□□□□□ -1.14
PRDM9-201ENST00000296682 FAM27E3Q08E93 113 aa7.91□□□□□ -1.14
PRDM9-201ENST00000296682 IL15RAQ13261 267 aa7.91□□□□□ -1.14
PRDM9-201ENST00000296682 HAGHQ16775 308 aa7.91□□□□□ -1.14
PRDM9-201ENST00000296682 LRP11Q86VZ4 500 aa7.91□□□□□ -1.14
PRDM9-201ENST00000296682 LRRC29Q8WV35 223 aa7.91□□□□□ -1.14
PRDM9-201ENST00000296682 GTF3AQ92664 365 aaKnown RBP7.91□□□□□ -1.14
PRDM9-201ENST00000296682 MOB3AQ96BX8 217 aa7.91□□□□□ -1.14
PRDM9-201ENST00000296682 ABHD14BQ96IU4 210 aa7.91□□□□□ -1.14
PRDM9-201ENST00000296682 SPACA1Q9HBV2 294 aa7.91□□□□□ -1.14
PRDM9-201ENST00000296682 CACNG5Q9UF02 275 aa7.91□□□□□ -1.14
PRDM9-201ENST00000296682 J3QT63 122 aa7.9□□□□□ -1.14
PRDM9-201ENST00000296682 SMPD2O60906 423 aa7.9□□□□□ -1.14
PRDM9-201ENST00000296682 CLDN1O95832 211 aa7.9□□□□□ -1.14
PRDM9-201ENST00000296682 CRYAAP02489 173 aa7.9□□□□□ -1.14
PRDM9-201ENST00000296682 CECR9P0C854 216 aa7.9□□□□□ -1.14
PRDM9-201ENST00000296682 RPS2P15880 293 aaKnown RBP7.9□□□□□ -1.14
PRDM9-201ENST00000296682 MIDNQ504T8 468 aa7.9□□□□□ -1.14
PRDM9-201ENST00000296682 PLPPR1Q8TBJ4 325 aa7.9□□□□□ -1.14
PRDM9-201ENST00000296682 TCTEX1D2Q8WW35 142 aa7.9□□□□□ -1.14
PRDM9-201ENST00000296682 DHRS9Q9BPW9 319 aa7.9□□□□□ -1.14
PRDM9-201ENST00000296682 SAV1Q9H4B6 383 aaPredicted RBP7.9□□□□□ -1.14
PRDM9-201ENST00000296682 RNF122Q9H9V4 155 aa7.9□□□□□ -1.14
PRDM9-201ENST00000296682 BARX1Q9HBU1 254 aaPredicted RBP7.9□□□□□ -1.14
PRDM9-201ENST00000296682 RPS10P5Q9NQ39 176 aa7.9□□□□□ -1.14
PRDM9-201ENST00000296682 MLXQ9UH92 298 aa7.9□□□□□ -1.14
PRDM9-201ENST00000296682 PUS1Q9Y606 427 aaKnown RBP eCLIP7.9□□□□□ -1.14
PRDM9-201ENST00000296682 ARHGAP21Q5T5U3 1957 aa7.9□□□□□ -1.14
PRDM9-201ENST00000296682 CACNA1AO00555 2505 aa7.9□□□□□ -1.14
PRDM9-201ENST00000296682 OR5H1A6NKK0 313 aa7.9□□□□□ -1.14
PRDM9-201ENST00000296682 OR5B21A6NL26 309 aa7.9□□□□□ -1.14
PRDM9-201ENST00000296682 A8MXK9 166 aa7.9□□□□□ -1.14
PRDM9-201ENST00000296682 KIR2DL2P43627 348 aaPredicted RBP7.9□□□□□ -1.14
PRDM9-201ENST00000296682 SURF2Q15527 256 aaPredicted RBP7.9□□□□□ -1.14
PRDM9-201ENST00000296682 SPAG16Q8N0X2 631 aa7.9□□□□□ -1.14
PRDM9-201ENST00000296682 LILRB2Q8N423 598 aa7.9□□□□□ -1.14
PRDM9-201ENST00000296682 SFT2D1Q8WV19 159 aa7.9□□□□□ -1.14
PRDM9-201ENST00000296682 PIGMQ9H3S5 423 aa7.9□□□□□ -1.14
PRDM9-201ENST00000296682 GLS2Q9UI32 602 aa7.9□□□□□ -1.14
PRDM9-201ENST00000296682 SMCO3A2RU48 225 aa7.9□□□□□ -1.15
PRDM9-201ENST00000296682 RRP8O43159 456 aaKnown RBP7.9□□□□□ -1.15
PRDM9-201ENST00000296682 SS18L1O75177 396 aaPredicted RBP7.9□□□□□ -1.15
PRDM9-201ENST00000296682 JTBO76095 146 aa7.9□□□□□ -1.15
PRDM9-201ENST00000296682 HAND1O96004 215 aa7.9□□□□□ -1.15
PRDM9-201ENST00000296682 HEXAP06865 529 aa7.9□□□□□ -1.15
PRDM9-201ENST00000296682 ZP3P21754 424 aa7.9□□□□□ -1.15
PRDM9-201ENST00000296682 ECI1P42126 302 aa7.9□□□□□ -1.15
PRDM9-201ENST00000296682 GLIPR1P48060 266 aa7.9□□□□□ -1.15
PRDM9-201ENST00000296682 ELLP55199 621 aaPredicted RBP7.9□□□□□ -1.15
PRDM9-201ENST00000296682 HERPUD1Q15011 391 aa7.9□□□□□ -1.15
PRDM9-201ENST00000296682 GPR157Q5UAW9 335 aa7.9□□□□□ -1.15
PRDM9-201ENST00000296682 Q6ZPA2 131 aa7.9□□□□□ -1.15
PRDM9-201ENST00000296682 THNSL2Q86YJ6 484 aa7.9□□□□□ -1.15
PRDM9-201ENST00000296682 OR2C3Q8N628 320 aa7.9□□□□□ -1.15
PRDM9-201ENST00000296682 TLNRD1Q9H1K6 362 aa7.9□□□□□ -1.15
PRDM9-201ENST00000296682 OR2D2Q9H210 308 aa7.9□□□□□ -1.15
PRDM9-201ENST00000296682 PSG11Q9UQ72 335 aa7.9□□□□□ -1.15
PRDM9-201ENST00000296682 TSPAN9O75954 239 aa7.89□□□□□ -1.15
PRDM9-201ENST00000296682 SSTR5P35346 364 aa7.89□□□□□ -1.15
PRDM9-201ENST00000296682 GABRA6Q16445 453 aa7.89□□□□□ -1.15
PRDM9-201ENST00000296682 KRBOX4Q5JUW0 171 aa7.89□□□□□ -1.15
PRDM9-201ENST00000296682 DHRS11Q6UWP2 260 aa7.89□□□□□ -1.15
PRDM9-201ENST00000296682 TECTBQ96PL2 329 aa7.89□□□□□ -1.15
PRDM9-201ENST00000296682 SPIN2AQ99865 258 aa7.89□□□□□ -1.15
PRDM9-201ENST00000296682 SPIN2BQ9BPZ2 258 aa7.89□□□□□ -1.15
PRDM9-201ENST00000296682 NKX6-2Q9C056 277 aaPredicted RBP7.89□□□□□ -1.15
PRDM9-201ENST00000296682 FAM212BQ9NTI7 297 aaPredicted RBP7.89□□□□□ -1.15
PRDM9-201ENST00000296682 TAAR3PQ9P1P4 343 aa7.89□□□□□ -1.15
PRDM9-201ENST00000296682 ATPIF1Q9UII2 106 aa7.89□□□□□ -1.15
PRDM9-201ENST00000296682 ATP23Q9Y6H3 246 aa7.89□□□□□ -1.15
PRDM9-201ENST00000296682 IGKV1-6A0A0C4DH72 117 aa7.89□□□□□ -1.15
PRDM9-201ENST00000296682 ZNF891A8MT65 544 aaPredicted RBP7.89□□□□□ -1.15
PRDM9-201ENST00000296682 PSPNO60542 156 aa7.89□□□□□ -1.15
PRDM9-201ENST00000296682 PGLYRP1O75594 196 aaPredicted RBP7.89□□□□□ -1.15
PRDM9-201ENST00000296682 DEDDO75618 318 aa7.89□□□□□ -1.15
PRDM9-201ENST00000296682 LCN15Q6UWW0 184 aa7.89□□□□□ -1.15
PRDM9-201ENST00000296682 ETV3LQ6ZN32 361 aa7.89□□□□□ -1.15
PRDM9-201ENST00000296682 Q6ZT83 130 aa7.89□□□□□ -1.15
PRDM9-201ENST00000296682 MOGAT3Q86VF5 341 aa7.89□□□□□ -1.15
PRDM9-201ENST00000296682 ZNRF1Q8ND25 227 aa7.89□□□□□ -1.15
PRDM9-201ENST00000296682 OR5T1Q8NG75 326 aa7.89□□□□□ -1.15
PRDM9-201ENST00000296682 C2CD4CQ8TF44 421 aa7.89□□□□□ -1.15
PRDM9-201ENST00000296682 ABHD14AQ9BUJ0 271 aa7.89□□□□□ -1.15
PRDM9-201ENST00000296682 ASCL3Q9NQ33 180 aa7.89□□□□□ -1.15
PRDM9-201ENST00000296682 METRNQ9UJH8 293 aa7.89□□□□□ -1.15
PRDM9-201ENST00000296682 ST8SIA5O15466 376 aa7.89□□□□□ -1.15
PRDM9-201ENST00000296682 CST4P01036 141 aa7.89□□□□□ -1.15
PRDM9-201ENST00000296682 SELENOVP59797 346 aa7.89□□□□□ -1.15
PRDM9-201ENST00000296682 COLCA1Q6ZS62 124 aa7.89□□□□□ -1.15
PRDM9-201ENST00000296682 SCGB1C1Q8TD33 95 aa7.89□□□□□ -1.15
PRDM9-201ENST00000296682 S100PBPQ96BU1 408 aa7.89□□□□□ -1.15
PRDM9-201ENST00000296682 OR2W1Q9Y3N9 320 aa7.89□□□□□ -1.15
PRDM9-201ENST00000296682 YLPM1P49750 1951 aaKnown RBP7.88□□□□□ -1.15
PRDM9-201ENST00000296682 ATP6V1G2-DDX39BF2Z307 99 aa7.88□□□□□ -1.15
PRDM9-201ENST00000296682 OPN1MWP04001 364 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms