RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 EFNB1P98172 346 aa4.13□□□□□ -1.75
UBR1-201ENST00000290650 ZNF880Q6PDB4 577 aa4.13□□□□□ -1.75
UBR1-201ENST00000290650 FDCSPQ8NFU4 85 aa4.13□□□□□ -1.75
UBR1-201ENST00000290650 PLEKHA2Q9HB19 425 aa4.13□□□□□ -1.75
UBR1-201ENST00000290650 KCNMB2Q9Y691 235 aa4.13□□□□□ -1.75
UBR1-201ENST00000290650 IGKV3D-11A0A0A0MRZ8 115 aa4.13□□□□□ -1.75
UBR1-201ENST00000290650 TRAV17A0A0B4J275 112 aa4.13□□□□□ -1.75
UBR1-201ENST00000290650 HMSDA8MTL9 139 aa4.13□□□□□ -1.75
UBR1-201ENST00000290650 TAAR5O14804 337 aa4.13□□□□□ -1.75
UBR1-201ENST00000290650 DFFBO76075 338 aa4.13□□□□□ -1.75
UBR1-201ENST00000290650 CTXN2P0C2S0 81 aa4.13□□□□□ -1.75
UBR1-201ENST00000290650 GNB2P62879 340 aa4.13□□□□□ -1.75
UBR1-201ENST00000290650 IGLV3-21P80748 117 aaPredicted RBP4.13□□□□□ -1.75
UBR1-201ENST00000290650 TNFAIP6P98066 277 aaPredicted RBP4.13□□□□□ -1.75
UBR1-201ENST00000290650 LINC00114Q6XXX2 140 aa4.13□□□□□ -1.75
UBR1-201ENST00000290650 BHLHA15Q7RTS1 189 aaPredicted RBP4.13□□□□□ -1.75
UBR1-201ENST00000290650 BAGE3Q86Y29 109 aa4.13□□□□□ -1.75
UBR1-201ENST00000290650 BAGE2Q86Y30 109 aa4.13□□□□□ -1.75
UBR1-201ENST00000290650 TMEM37Q8WXS4 190 aa4.13□□□□□ -1.75
UBR1-201ENST00000290650 C22orf15Q8WYQ4 148 aa4.13□□□□□ -1.75
UBR1-201ENST00000290650 CABLES2Q9BTV7 478 aa4.13□□□□□ -1.75
UBR1-201ENST00000290650 SLC26A1Q9H2B4 701 aa4.13□□□□□ -1.75
UBR1-201ENST00000290650 PIPOXQ9P0Z9 390 aa4.13□□□□□ -1.75
UBR1-201ENST00000290650 MSGN1A6NI15 193 aa4.13□□□□□ -1.75
UBR1-201ENST00000290650 NCBP2LA6PVI3 153 aaKnown RBP4.13□□□□□ -1.75
UBR1-201ENST00000290650 A8MXE2 369 aa4.13□□□□□ -1.75
UBR1-201ENST00000290650 J3QRE1 110 aa4.13□□□□□ -1.75
UBR1-201ENST00000290650 CST4P01036 141 aa4.13□□□□□ -1.75
UBR1-201ENST00000290650 GP1BAP07359 652 aa4.13□□□□□ -1.75
UBR1-201ENST00000290650 MELTFP08582 738 aa4.13□□□□□ -1.75
UBR1-201ENST00000290650 SP9P0CG40 484 aa4.13□□□□□ -1.75
UBR1-201ENST00000290650 MMP9P14780 707 aa4.13□□□□□ -1.75
UBR1-201ENST00000290650 NTF3P20783 257 aa4.13□□□□□ -1.75
UBR1-201ENST00000290650 ARL3P36405 182 aa4.13□□□□□ -1.75
UBR1-201ENST00000290650 P2RY4P51582 365 aa4.13□□□□□ -1.75
UBR1-201ENST00000290650 RBM11P57052 281 aaKnown RBP4.13□□□□□ -1.75
UBR1-201ENST00000290650 ROM1Q03395 351 aa4.13□□□□□ -1.75
UBR1-201ENST00000290650 COL10A1Q03692 680 aa4.13□□□□□ -1.75
UBR1-201ENST00000290650 SLC38A11Q08AI6 406 aa4.13□□□□□ -1.75
UBR1-201ENST00000290650 LIAT1Q6ZQX7 453 aa4.13□□□□□ -1.75
UBR1-201ENST00000290650 PPP1R32Q7Z5V6 425 aa4.13□□□□□ -1.75
UBR1-201ENST00000290650 CALHM1Q8IU99 346 aa4.13□□□□□ -1.75
UBR1-201ENST00000290650 AQP3Q92482 292 aa4.13□□□□□ -1.75
UBR1-201ENST00000290650 UHRF2Q96PU4 802 aa4.13□□□□□ -1.75
UBR1-201ENST00000290650 RARRES2Q99969 163 aa4.13□□□□□ -1.75
UBR1-201ENST00000290650 ANGPTL4Q9BY76 406 aa4.13□□□□□ -1.75
UBR1-201ENST00000290650 WDR54Q9H977 334 aa4.13□□□□□ -1.75
UBR1-201ENST00000290650 LAMP3Q9UQV4 416 aa4.13□□□□□ -1.75
UBR1-201ENST00000290650 FTH1P19P0C7X4 201 aa4.13□□□□□ -1.75
UBR1-201ENST00000290650 FGF5P12034 268 aa4.13□□□□□ -1.75
UBR1-201ENST00000290650 KCNJ3P48549 501 aa4.13□□□□□ -1.75
UBR1-201ENST00000290650 FLI1Q01543 452 aaPredicted RBP4.13□□□□□ -1.75
UBR1-201ENST00000290650 ZP4Q12836 540 aa4.13□□□□□ -1.75
UBR1-201ENST00000290650 ETV3LQ6ZN32 361 aa4.13□□□□□ -1.75
UBR1-201ENST00000290650 WNT5BQ9H1J7 359 aa4.13□□□□□ -1.75
UBR1-201ENST00000290650 F6UZH7 168 aa4.13□□□□□ -1.75
UBR1-201ENST00000290650 K7ESF4 209 aa4.13□□□□□ -1.75
UBR1-201ENST00000290650 MUC1P15941 1255 aaPredicted RBP4.13□□□□□ -1.75
UBR1-201ENST00000290650 FAM3AP98173 230 aa4.13□□□□□ -1.75
UBR1-201ENST00000290650 AWAT1Q58HT5 328 aa4.13□□□□□ -1.75
UBR1-201ENST00000290650 TMEM41BQ5BJD5 291 aa4.13□□□□□ -1.75
UBR1-201ENST00000290650 NHLRC3Q5JS37 347 aa4.13□□□□□ -1.75
UBR1-201ENST00000290650 FAM27BQ5VT28 67 aa4.13□□□□□ -1.75
UBR1-201ENST00000290650 SPNS3Q6ZMD2 512 aa4.13□□□□□ -1.75
UBR1-201ENST00000290650 MARVELD3Q96A59 401 aa4.13□□□□□ -1.75
UBR1-201ENST00000290650 NMES1Q9C002 83 aa4.13□□□□□ -1.75
UBR1-201ENST00000290650 UQCC1Q9NVA1 299 aa4.13□□□□□ -1.75
UBR1-201ENST00000290650 TNFSF18Q9UNG2 199 aa4.13□□□□□ -1.75
UBR1-201ENST00000290650 LAMA1P25391 3075 aa4.13□□□□□ -1.75
UBR1-201ENST00000290650 MBPP02686 304 aaPredicted RBP4.13□□□□□ -1.75
UBR1-201ENST00000290650 GAMTQ14353 236 aa4.13□□□□□ -1.75
UBR1-201ENST00000290650 PRR7Q8TB68 274 aa4.13□□□□□ -1.75
UBR1-201ENST00000290650 NTNG2Q96CW9 530 aa4.13□□□□□ -1.75
UBR1-201ENST00000290650 DEPPQ9NTK1 212 aa4.13□□□□□ -1.75
UBR1-201ENST00000290650 CLCF1Q9UBD9 225 aa4.13□□□□□ -1.75
UBR1-201ENST00000290650 SSUH2Q9Y2M2 353 aa4.13□□□□□ -1.75
UBR1-201ENST00000290650 KPTNQ9Y664 436 aa4.13□□□□□ -1.75
UBR1-201ENST00000290650 TRGV10A0A0A0MS01 117 aa4.12□□□□□ -1.75
UBR1-201ENST00000290650 CLPSP04118 112 aa4.12□□□□□ -1.75
UBR1-201ENST00000290650 HSPB1P04792 205 aaKnown RBP4.12□□□□□ -1.75
UBR1-201ENST00000290650 MPGP29372 298 aa4.12□□□□□ -1.75
UBR1-201ENST00000290650 KLF3P57682 345 aaPredicted RBP4.12□□□□□ -1.75
UBR1-201ENST00000290650 EWSR1Q01844 656 aaKnown RBP eCLIP4.12□□□□□ -1.75
UBR1-201ENST00000290650 PJVKQ0ZLH3 352 aa4.12□□□□□ -1.75
UBR1-201ENST00000290650 ENDOGQ14249 297 aaKnown RBP4.12□□□□□ -1.75
UBR1-201ENST00000290650 FBXW9Q5XUX1 488 aa4.12□□□□□ -1.75
UBR1-201ENST00000290650 HOGA1Q86XE5 327 aa4.12□□□□□ -1.75
UBR1-201ENST00000290650 ZCCHC24Q8N2G6 241 aaKnown RBP4.12□□□□□ -1.75
UBR1-201ENST00000290650 OR13D1Q8NGV5 346 aa4.12□□□□□ -1.75
UBR1-201ENST00000290650 OR1L1Q8NH94 360 aa4.12□□□□□ -1.75
UBR1-201ENST00000290650 FGF11Q92914 225 aa4.12□□□□□ -1.75
UBR1-201ENST00000290650 ZNF426Q9BUY5 554 aa4.12□□□□□ -1.75
UBR1-201ENST00000290650 PRO1933Q9H354 126 aa4.12□□□□□ -1.75
UBR1-201ENST00000290650 DYSFO75923 2080 aa4.12□□□□□ -1.75
UBR1-201ENST00000290650 TMEM131Q92545 1883 aa4.12□□□□□ -1.75
UBR1-201ENST00000290650 A0A1W2PNV4 684 aa4.12□□□□□ -1.75
UBR1-201ENST00000290650 H0YL77 283 aa4.12□□□□□ -1.75
UBR1-201ENST00000290650 APOA2P02652 100 aa4.12□□□□□ -1.75
UBR1-201ENST00000290650 KCNIP4Q6PIL6 250 aa4.12□□□□□ -1.75
UBR1-201ENST00000290650 PIK3IP1Q96FE7 263 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms