RNA–Protein interactions for RNA: ENST00000290460.7

SCUBE1-201, Transcript of signal peptide, CUB domain and EGF like domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene SCUBE1, Length 2,258 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE1-201ENST00000290460 ZNF880Q6PDB4 577 aa16.94■□□□□ 0.3
SCUBE1-201ENST00000290460 OR2J1Q9GZK6 312 aa16.94■□□□□ 0.3
SCUBE1-201ENST00000290460 SLC25A31Q9H0C2 315 aa16.94■□□□□ 0.3
SCUBE1-201ENST00000290460 TRBV6-6A0A0A6YYG2 114 aa16.93■□□□□ 0.3
SCUBE1-201ENST00000290460 UMAD1C9J7I0 102 aa16.93■□□□□ 0.3
SCUBE1-201ENST00000290460 J3QT63 122 aa16.93■□□□□ 0.3
SCUBE1-201ENST00000290460 OR13C7P0DN81 318 aa16.93■□□□□ 0.3
SCUBE1-201ENST00000290460 ZNF766Q5HY98 468 aa16.93■□□□□ 0.3
SCUBE1-201ENST00000290460 GCNT2Q8N0V5 402 aa16.93■□□□□ 0.3
SCUBE1-201ENST00000290460 NANOS1Q8WY41 292 aaKnown RBP16.93■□□□□ 0.3
SCUBE1-201ENST00000290460 ISOC2Q96AB3 205 aa16.93■□□□□ 0.3
SCUBE1-201ENST00000290460 PKIBQ9C010 78 aa16.93■□□□□ 0.3
SCUBE1-201ENST00000290460 RNF115Q9Y4L5 304 aa16.93■□□□□ 0.3
SCUBE1-201ENST00000290460 DUXBA0A1W2PPF3 345 aa16.93■□□□□ 0.3
SCUBE1-201ENST00000290460 C7orf77A4D0Y5 90 aa16.93■□□□□ 0.3
SCUBE1-201ENST00000290460 WRBO00258 174 aa16.93■□□□□ 0.3
SCUBE1-201ENST00000290460 IDH3GP51553 393 aaPredicted RBP16.93■□□□□ 0.3
SCUBE1-201ENST00000290460 PAX9P55771 341 aa16.93■□□□□ 0.3
SCUBE1-201ENST00000290460 HMGN3Q15651 99 aa16.93■□□□□ 0.3
SCUBE1-201ENST00000290460 SCCPDHQ8NBX0 429 aa16.93■□□□□ 0.3
SCUBE1-201ENST00000290460 KLF2Q9Y5W3 355 aaPredicted RBP16.93■□□□□ 0.3
SCUBE1-201ENST00000290460 NBEAQ8NFP9 2946 aa16.92■□□□□ 0.3
SCUBE1-201ENST00000290460 TBC1D28Q2M2D7 210 aa16.92■□□□□ 0.3
SCUBE1-201ENST00000290460 GPR146Q96CH1 333 aa16.92■□□□□ 0.3
SCUBE1-201ENST00000290460 ESRP2Q9H6T0 727 aaKnown RBP16.92■□□□□ 0.3
SCUBE1-201ENST00000290460 OR2H2O95918 312 aa16.91■□□□□ 0.3
SCUBE1-201ENST00000290460 IGLV2-14P01704 120 aa16.91■□□□□ 0.3
SCUBE1-201ENST00000290460 SERPINE2P07093 398 aa16.91■□□□□ 0.3
SCUBE1-201ENST00000290460 ZNF14P17017 642 aaPredicted RBP16.91■□□□□ 0.3
SCUBE1-201ENST00000290460 CD300LFQ8TDQ1 290 aa16.91■□□□□ 0.3
SCUBE1-201ENST00000290460 ABHD14BQ96IU4 210 aa16.91■□□□□ 0.3
SCUBE1-201ENST00000290460 CABLES2Q9BTV7 478 aa16.91■□□□□ 0.3
SCUBE1-201ENST00000290460 SMPD2O60906 423 aa16.91■□□□□ 0.3
SCUBE1-201ENST00000290460 LYZL6O75951 148 aa16.91■□□□□ 0.3
SCUBE1-201ENST00000290460 Q6ZRM9 215 aa16.91■□□□□ 0.3
SCUBE1-201ENST00000290460 OR10V1Q8NGI7 309 aa16.91■□□□□ 0.3
SCUBE1-201ENST00000290460 RTL8AQ9BWD3 113 aa16.91■□□□□ 0.3
SCUBE1-201ENST00000290460 PPP1R3CQ9UQK1 317 aa16.91■□□□□ 0.3
SCUBE1-201ENST00000290460 PCP4L1A6NKN8 68 aa16.9■□□□□ 0.3
SCUBE1-201ENST00000290460 CDIPTO14735 213 aa16.9■□□□□ 0.3
SCUBE1-201ENST00000290460 PPP1CBP62140 327 aa16.9■□□□□ 0.3
SCUBE1-201ENST00000290460 TESK1Q15569 626 aa16.9■□□□□ 0.3
SCUBE1-201ENST00000290460 ZNF295-AS1Q8N0V1 137 aa16.9■□□□□ 0.3
SCUBE1-201ENST00000290460 IL22RA2Q969J5 263 aa16.9■□□□□ 0.3
SCUBE1-201ENST00000290460 PBDC1Q9BVG4 233 aa16.9■□□□□ 0.3
SCUBE1-201ENST00000290460 SLC35B3Q9H1N7 401 aa16.9■□□□□ 0.3
SCUBE1-201ENST00000290460 SVILO95425 2214 aa16.9■□□□□ 0.3
SCUBE1-201ENST00000290460 CACNA1HO95180 2353 aa16.9■□□□□ 0.3
SCUBE1-201ENST00000290460 WISP2O76076 250 aa16.9■□□□□ 0.3
SCUBE1-201ENST00000290460 IGKV1-39P01597 117 aa16.9■□□□□ 0.3
SCUBE1-201ENST00000290460 IGKV1D-39P04432 117 aa16.9■□□□□ 0.3
SCUBE1-201ENST00000290460 HOXA4Q00056 320 aaPredicted RBP16.9■□□□□ 0.3
SCUBE1-201ENST00000290460 SPSB3Q6PJ21 355 aa16.9■□□□□ 0.3
SCUBE1-201ENST00000290460 RNASE11Q8TAA1 199 aaKnown RBP16.9■□□□□ 0.3
SCUBE1-201ENST00000290460 HIST1H2BAQ96A08 127 aa16.9■□□□□ 0.3
SCUBE1-201ENST00000290460 KCNJ16Q9NPI9 418 aa16.9■□□□□ 0.3
SCUBE1-201ENST00000290460 USF3Q68DE3 2245 aa16.9■□□□□ 0.3
SCUBE1-201ENST00000290460 IGHV1-2P23083 117 aa16.89■□□□□ 0.29
SCUBE1-201ENST00000290460 S100GP29377 79 aa16.89■□□□□ 0.29
SCUBE1-201ENST00000290460 TMEM267Q0VDI3 215 aaPredicted RBP16.89■□□□□ 0.29
SCUBE1-201ENST00000290460 C15orf54Q8N8G6 183 aa16.89■□□□□ 0.29
SCUBE1-201ENST00000290460 IFT22Q9H7X7 185 aa16.89■□□□□ 0.29
SCUBE1-201ENST00000290460 BIN3Q9NQY0 253 aa16.89■□□□□ 0.29
SCUBE1-201ENST00000290460 TRAPPC2LQ9UL33 140 aa16.89■□□□□ 0.29
SCUBE1-201ENST00000290460 BOD1L1Q8NFC6 3051 aa16.89■□□□□ 0.29
SCUBE1-201ENST00000290460 HSPA12AO43301 675 aa16.89■□□□□ 0.29
SCUBE1-201ENST00000290460 ZNF16P17020 682 aaPredicted RBP16.89■□□□□ 0.29
SCUBE1-201ENST00000290460 CEBPDP49716 269 aaPredicted RBP16.89■□□□□ 0.29
SCUBE1-201ENST00000290460 HABP2Q14520 560 aaPredicted RBP16.89■□□□□ 0.29
SCUBE1-201ENST00000290460 ZDHHC11Q9H8X9 412 aa16.89■□□□□ 0.29
SCUBE1-201ENST00000290460 LRP5LA4QPB2 252 aa16.88■□□□□ 0.29
SCUBE1-201ENST00000290460 H0YL77 283 aa16.88■□□□□ 0.29
SCUBE1-201ENST00000290460 BAXQ07812 192 aa16.88■□□□□ 0.29
SCUBE1-201ENST00000290460 ZNF497Q6ZNH5 498 aa16.88■□□□□ 0.29
SCUBE1-201ENST00000290460 LFNGQ8NES3 379 aa16.88■□□□□ 0.29
SCUBE1-201ENST00000290460 SLC25A40Q8TBP6 338 aa16.88■□□□□ 0.29
SCUBE1-201ENST00000290460 LOXL4Q96JB6 756 aa16.88■□□□□ 0.29
SCUBE1-201ENST00000290460 KCNS2Q9ULS6 477 aa16.88■□□□□ 0.29
SCUBE1-201ENST00000290460 RBM7Q9Y580 266 aaKnown RBP16.88■□□□□ 0.29
SCUBE1-201ENST00000290460 EP300Q09472 2414 aaPredicted RBP16.88■□□□□ 0.29
SCUBE1-201ENST00000290460 A0A1W2PPH5 198 aa16.87■□□□□ 0.29
SCUBE1-201ENST00000290460 KIAA1324LA8MWY0 1029 aaPredicted RBP16.87■□□□□ 0.29
SCUBE1-201ENST00000290460 NXPH2O95156 264 aa16.87■□□□□ 0.29
SCUBE1-201ENST00000290460 GRPP07492 148 aa16.87■□□□□ 0.29
SCUBE1-201ENST00000290460 ERVK11-1P61568 191 aa16.87■□□□□ 0.29
SCUBE1-201ENST00000290460 SRSF6Q13247 344 aaKnown RBP16.87■□□□□ 0.29
SCUBE1-201ENST00000290460 CDH20Q9HBT6 801 aa16.87■□□□□ 0.29
SCUBE1-201ENST00000290460 CACNG5Q9UF02 275 aa16.87■□□□□ 0.29
SCUBE1-201ENST00000290460 A6NLC8 198 aa16.87■□□□□ 0.29
SCUBE1-201ENST00000290460 WDR1O75083 606 aa16.87■□□□□ 0.29
SCUBE1-201ENST00000290460 ARG1P05089 322 aa16.87■□□□□ 0.29
SCUBE1-201ENST00000290460 MMP9P14780 707 aa16.87■□□□□ 0.29
SCUBE1-201ENST00000290460 UBE2NP61088 152 aaKnown RBP16.87■□□□□ 0.29
SCUBE1-201ENST00000290460 HAGHQ16775 308 aa16.87■□□□□ 0.29
SCUBE1-201ENST00000290460 KRBOX4Q5JUW0 171 aa16.87■□□□□ 0.29
SCUBE1-201ENST00000290460 GMPPAQ96IJ6 420 aaPredicted RBP16.87■□□□□ 0.29
SCUBE1-201ENST00000290460 ATP5SQ99766 215 aa16.87■□□□□ 0.29
SCUBE1-201ENST00000290460 OR14J1Q9UGF5 321 aa16.87■□□□□ 0.29
SCUBE1-201ENST00000290460 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.86■□□□□ 0.29
SCUBE1-201ENST00000290460 HOXA1P49639 335 aaPredicted RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms