RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 GMPPAQ96IJ6 420 aaPredicted RBP7.71□□□□□ -1.17
NIPBL-201ENST00000282516 MRPL16Q9NX20 251 aaKnown RBP7.71□□□□□ -1.17
NIPBL-201ENST00000282516 IL20Q9NYY1 176 aa7.71□□□□□ -1.17
NIPBL-201ENST00000282516 TMEM56-RWDD3S4R434 201 aa7.71□□□□□ -1.17
NIPBL-201ENST00000282516 A0A1W2PS18 150 aa7.71□□□□□ -1.17
NIPBL-201ENST00000282516 TNFSF10P50591 281 aa7.71□□□□□ -1.17
NIPBL-201ENST00000282516 MPV17LQ2QL34 196 aa7.71□□□□□ -1.17
NIPBL-201ENST00000282516 FAM109BQ6ICB4 259 aaPredicted RBP7.71□□□□□ -1.17
NIPBL-201ENST00000282516 SLC23A3Q6PIS1 610 aa7.71□□□□□ -1.17
NIPBL-201ENST00000282516 ARG1P05089 322 aa7.71□□□□□ -1.18
NIPBL-201ENST00000282516 DLX6P56179 175 aa7.71□□□□□ -1.18
NIPBL-201ENST00000282516 SLC35B1P78383 322 aa7.71□□□□□ -1.18
NIPBL-201ENST00000282516 SLC25A34Q6PIV7 304 aa7.71□□□□□ -1.18
NIPBL-201ENST00000282516 LDLRAD3Q86YD5 345 aa7.71□□□□□ -1.18
NIPBL-201ENST00000282516 TSPAN32Q96QS1 320 aa7.71□□□□□ -1.18
NIPBL-201ENST00000282516 TRA2AQ13595 282 aaKnown RBP eCLIP7.71□□□□□ -1.185e-6■■■■□ 19.4
NIPBL-201ENST00000282516 PLPPR5Q32ZL2 321 aa7.71□□□□□ -1.18
NIPBL-201ENST00000282516 CNTD2Q9H8S5 307 aa7.71□□□□□ -1.18
NIPBL-201ENST00000282516 KLK10O43240 276 aa7.71□□□□□ -1.18
NIPBL-201ENST00000282516 TSPOP30536 169 aa7.71□□□□□ -1.18
NIPBL-201ENST00000282516 CKS2P33552 79 aa7.71□□□□□ -1.18
NIPBL-201ENST00000282516 LRP10Q7Z4F1 713 aa7.71□□□□□ -1.18
NIPBL-201ENST00000282516 CBLN2Q8IUK8 224 aa7.71□□□□□ -1.18
NIPBL-201ENST00000282516 OIT3Q8WWZ8 545 aa7.71□□□□□ -1.18
NIPBL-201ENST00000282516 IL19Q9UHD0 177 aa7.71□□□□□ -1.18
NIPBL-201ENST00000282516 PRSS2P07478 247 aa7.71□□□□□ -1.18
NIPBL-201ENST00000282516 NAT2P11245 290 aa7.71□□□□□ -1.18
NIPBL-201ENST00000282516 MEIG1Q5JSS6 88 aa7.71□□□□□ -1.18
NIPBL-201ENST00000282516 C12orf73Q69YU5 71 aa7.71□□□□□ -1.18
NIPBL-201ENST00000282516 RAX2Q96IS3 184 aa7.71□□□□□ -1.18
NIPBL-201ENST00000282516 VCX2Q9H322 139 aa7.71□□□□□ -1.18
NIPBL-201ENST00000282516 AMY1AP04745 511 aa7.71□□□□□ -1.18
NIPBL-201ENST00000282516 CRHP06850 196 aa7.71□□□□□ -1.18
NIPBL-201ENST00000282516 ZNF117Q03924 483 aa7.71□□□□□ -1.18
NIPBL-201ENST00000282516 STPG3Q8N7X2 389 aa7.71□□□□□ -1.18
NIPBL-201ENST00000282516 WDR34Q96EX3 536 aa7.71□□□□□ -1.18
NIPBL-201ENST00000282516 TXNDC17Q9BRA2 123 aa7.71□□□□□ -1.18
NIPBL-201ENST00000282516 HSPB7Q9UBY9 170 aa7.71□□□□□ -1.18
NIPBL-201ENST00000282516 SBK3P0C264 359 aa7.71□□□□□ -1.18
NIPBL-201ENST00000282516 ABCA7Q8IZY2 2146 aa7.7□□□□□ -1.18
NIPBL-201ENST00000282516 C9orf172C9J069 976 aa7.7□□□□□ -1.18
NIPBL-201ENST00000282516 PLPP2O43688 288 aa7.7□□□□□ -1.18
NIPBL-201ENST00000282516 FCMRO60667 390 aa7.7□□□□□ -1.18
NIPBL-201ENST00000282516 GNRHR2Q96P88 292 aa7.7□□□□□ -1.18
NIPBL-201ENST00000282516 ZNF345Q14585 488 aa7.7□□□□□ -1.18
NIPBL-201ENST00000282516 AGERQ15109 404 aa7.7□□□□□ -1.18
NIPBL-201ENST00000282516 KLHDC9Q8NEP7 349 aa7.7□□□□□ -1.18
NIPBL-201ENST00000282516 PHF7Q9BWX1 381 aaPredicted RBP7.7□□□□□ -1.18
NIPBL-201ENST00000282516 TMSB15BA0A087X1C1 80 aa7.7□□□□□ -1.18
NIPBL-201ENST00000282516 DMRTC1Q5HYR2 192 aa7.7□□□□□ -1.18
NIPBL-201ENST00000282516 ZBTB34Q8NCN2 500 aa7.7□□□□□ -1.18
NIPBL-201ENST00000282516 NEU3Q9UQ49 428 aa7.7□□□□□ -1.18
NIPBL-201ENST00000282516 SRFP11831 508 aa7.7□□□□□ -1.18
NIPBL-201ENST00000282516 C16orf92Q96LL3 132 aa7.7□□□□□ -1.18
NIPBL-201ENST00000282516 PARP11Q9NR21 331 aa7.7□□□□□ -1.18
NIPBL-201ENST00000282516 CDS2O95674 445 aa7.7□□□□□ -1.18
NIPBL-201ENST00000282516 HINT1P49773 126 aaPredicted RBP7.7□□□□□ -1.18
NIPBL-201ENST00000282516 GFERP55789 205 aa7.7□□□□□ -1.18
NIPBL-201ENST00000282516 HES3Q5TGS1 186 aa7.7□□□□□ -1.18
NIPBL-201ENST00000282516 LEMD1Q68G75 181 aa7.7□□□□□ -1.18
NIPBL-201ENST00000282516 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.7□□□□□ -1.18
NIPBL-201ENST00000282516 WNT16Q9UBV4 365 aa7.7□□□□□ -1.18
NIPBL-201ENST00000282516 KCNE3Q9Y6H6 103 aa7.7□□□□□ -1.18
NIPBL-201ENST00000282516 DDB2Q92466 427 aa7.7□□□□□ -1.18
NIPBL-201ENST00000282516 ZG16BQ96DA0 208 aa7.7□□□□□ -1.18
NIPBL-201ENST00000282516 SCNM1Q9BWG6 230 aa7.7□□□□□ -1.18
NIPBL-201ENST00000282516 GAB4Q2WGN9 574 aa7.7□□□□□ -1.18
NIPBL-201ENST00000282516 C2orf83Q53S99 150 aa7.7□□□□□ -1.18
NIPBL-201ENST00000282516 GMLQ99445 158 aa7.7□□□□□ -1.18
NIPBL-201ENST00000282516 RNF122Q9H9V4 155 aa7.7□□□□□ -1.18
NIPBL-201ENST00000282516 USP54Q70EL1 1684 aa7.7□□□□□ -1.18
NIPBL-201ENST00000282516 TRBV23-1A0A0A0MS06 115 aa7.7□□□□□ -1.18
NIPBL-201ENST00000282516 KCNAB3O43448 404 aa7.7□□□□□ -1.18
NIPBL-201ENST00000282516 ZNF770Q6IQ21 691 aaPredicted RBP7.7□□□□□ -1.18
NIPBL-201ENST00000282516 OR10D3Q8NH80 312 aa7.7□□□□□ -1.18
NIPBL-201ENST00000282516 ALG14Q96F25 216 aa7.7□□□□□ -1.18
NIPBL-201ENST00000282516 ASB16Q96NS5 453 aa7.7□□□□□ -1.18
NIPBL-201ENST00000282516 HSPB9Q9BQS6 159 aa7.7□□□□□ -1.18
NIPBL-201ENST00000282516 H3BMH7 237 aa7.69□□□□□ -1.18
NIPBL-201ENST00000282516 MT-CO3P00414 261 aa7.69□□□□□ -1.18
NIPBL-201ENST00000282516 ZNF32P17041 273 aa7.69□□□□□ -1.18
NIPBL-201ENST00000282516 CRYBB2P43320 205 aa7.69□□□□□ -1.18
NIPBL-201ENST00000282516 RELQ04864 619 aaPredicted RBP7.69□□□□□ -1.18
NIPBL-201ENST00000282516 OR10AC1Q8NH08 325 aa7.69□□□□□ -1.18
NIPBL-201ENST00000282516 JKAMPQ9P055 326 aa7.69□□□□□ -1.18
NIPBL-201ENST00000282516 KCNE5Q9UJ90 142 aa7.69□□□□□ -1.18
NIPBL-201ENST00000282516 PKD1L3Q7Z443 1732 aa7.69□□□□□ -1.18
NIPBL-201ENST00000282516 PLCE1Q9P212 2302 aa7.69□□□□□ -1.18
NIPBL-201ENST00000282516 TSPO2Q5TGU0 170 aa7.69□□□□□ -1.18
NIPBL-201ENST00000282516 H1FOOQ8IZA3 346 aaPredicted RBP7.69□□□□□ -1.18
NIPBL-201ENST00000282516 SGMS2Q8NHU3 365 aa7.69□□□□□ -1.18
NIPBL-201ENST00000282516 ORAI1Q96D31 301 aa7.69□□□□□ -1.18
NIPBL-201ENST00000282516 KIR2DL4Q99706 377 aa7.69□□□□□ -1.18
NIPBL-201ENST00000282516 ZBTB42B2RXF5 422 aa7.69□□□□□ -1.18
NIPBL-201ENST00000282516 ACVR1Q04771 509 aa7.69□□□□□ -1.18
NIPBL-201ENST00000282516 SEZ6L2Q6UXD5 910 aa7.69□□□□□ -1.18
NIPBL-201ENST00000282516 SPEM1Q8N4L4 309 aa7.69□□□□□ -1.18
NIPBL-201ENST00000282516 LINC00469Q8N7U9 141 aa7.69□□□□□ -1.18
NIPBL-201ENST00000282516 OR4A5Q8NH83 315 aa7.69□□□□□ -1.18
NIPBL-201ENST00000282516 FOXQ1Q9C009 403 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms