RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 SLC51BQ86UW2 128 aa17.59■□□□□ 0.41
YBX3-202ENST00000279550 LRTM2Q8N967 370 aa17.59■□□□□ 0.41
YBX3-202ENST00000279550 ZNF565Q8N9K5 539 aa17.59■□□□□ 0.41
YBX3-202ENST00000279550 PCDHB10Q9UN67 800 aa17.59■□□□□ 0.41
YBX3-202ENST00000279550 HSD17B6O14756 317 aa17.58■□□□□ 0.41
YBX3-202ENST00000279550 SPDEFO95238 335 aa17.58■□□□□ 0.41
YBX3-202ENST00000279550 LMO1P25800 156 aa17.58■□□□□ 0.41
YBX3-202ENST00000279550 RND3P61587 244 aa17.58■□□□□ 0.41
YBX3-202ENST00000279550 TBC1D26Q86UD7 250 aa17.58■□□□□ 0.41
YBX3-202ENST00000279550 OR1S1Q8NH92 325 aa17.58■□□□□ 0.41
YBX3-202ENST00000279550 TAAR3PQ9P1P4 343 aa17.58■□□□□ 0.41
YBX3-202ENST00000279550 TRAPPC2LQ9UL33 140 aa17.58■□□□□ 0.41
YBX3-202ENST00000279550 WIPI2Q9Y4P8 454 aa17.58■□□□□ 0.41
YBX3-202ENST00000279550 KMT2BQ9UMN6 2715 aaPredicted RBP17.58■□□□□ 0.41
YBX3-202ENST00000279550 HCFC1P51610 2035 aa17.58■□□□□ 0.41
YBX3-202ENST00000279550 IGLV3-9A0A075B6K5 115 aa17.58■□□□□ 0.4
YBX3-202ENST00000279550 C3orf85A0A1B0GTC6 90 aa17.58■□□□□ 0.4
YBX3-202ENST00000279550 MSGN1A6NI15 193 aa17.58■□□□□ 0.4
YBX3-202ENST00000279550 H7C1Q1 480 aa17.58■□□□□ 0.4
YBX3-202ENST00000279550 GPR31O00270 319 aa17.58■□□□□ 0.4
YBX3-202ENST00000279550 S100A10P60903 97 aa17.58■□□□□ 0.4
YBX3-202ENST00000279550 HMGN3Q15651 99 aa17.58■□□□□ 0.4
YBX3-202ENST00000279550 OR10J5Q8NHC4 309 aa17.58■□□□□ 0.4
YBX3-202ENST00000279550 IL1F10Q8WWZ1 152 aa17.58■□□□□ 0.4
YBX3-202ENST00000279550 MRPL37Q9BZE1 423 aaKnown RBP17.58■□□□□ 0.4
YBX3-202ENST00000279550 MBNL3Q9NUK0 354 aaKnown RBP17.58■□□□□ 0.4
YBX3-202ENST00000279550 POM121CA8CG34 1229 aa17.57■□□□□ 0.4
YBX3-202ENST00000279550 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP17.57■□□□□ 0.4
YBX3-202ENST00000279550 IFNA21P01568 189 aa17.57■□□□□ 0.4
YBX3-202ENST00000279550 DMRTC2Q8IXT2 367 aaPredicted RBP17.57■□□□□ 0.4
YBX3-202ENST00000279550 FAM185AQ8N0U4 392 aa17.57■□□□□ 0.4
YBX3-202ENST00000279550 LGI3Q8N145 548 aa17.57■□□□□ 0.4
YBX3-202ENST00000279550 INO80EQ8NBZ0 244 aaPredicted RBP17.57■□□□□ 0.4
YBX3-202ENST00000279550 GSX2Q9BZM3 304 aa17.57■□□□□ 0.4
YBX3-202ENST00000279550 OR2W1Q9Y3N9 320 aa17.57■□□□□ 0.4
YBX3-202ENST00000279550 CHD3Q12873 2000 aaKnown RBP17.57■□□□□ 0.4
YBX3-202ENST00000279550 KANTRA0A1W2PQU2 76 aa17.56■□□□□ 0.4
YBX3-202ENST00000279550 LEUTXA8MZ59 168 aa17.56■□□□□ 0.4
YBX3-202ENST00000279550 SHISA9B4DS77 424 aa17.56■□□□□ 0.4
YBX3-202ENST00000279550 NPIPB11E5RHQ5 1161 aa17.56■□□□□ 0.4
YBX3-202ENST00000279550 SIAH2O43255 324 aa17.56■□□□□ 0.4
YBX3-202ENST00000279550 RLN2P04090 185 aa17.56■□□□□ 0.4
YBX3-202ENST00000279550 OR3A1P47881 315 aa17.56■□□□□ 0.4
YBX3-202ENST00000279550 MZT1Q08AG7 82 aa17.56■□□□□ 0.4
YBX3-202ENST00000279550 MEX3BQ6ZN04 569 aaKnown RBP17.56■□□□□ 0.4
YBX3-202ENST00000279550 PRR18Q8N4B5 295 aa17.56■□□□□ 0.4
YBX3-202ENST00000279550 CD177Q8N6Q3 437 aa17.56■□□□□ 0.4
YBX3-202ENST00000279550 SCARB1Q8WTV0 552 aa17.56■□□□□ 0.4
YBX3-202ENST00000279550 ST8SIA2Q92186 375 aa17.56■□□□□ 0.4
YBX3-202ENST00000279550 COQ2Q96H96 371 aa17.56■□□□□ 0.4
YBX3-202ENST00000279550 MEGF10Q96KG7 1140 aa17.56■□□□□ 0.4
YBX3-202ENST00000279550 CITED4Q96RK1 184 aa17.56■□□□□ 0.4
YBX3-202ENST00000279550 PARP12Q9H0J9 701 aaKnown RBP17.56■□□□□ 0.4
YBX3-202ENST00000279550 GLS2Q9UI32 602 aa17.56■□□□□ 0.4
YBX3-202ENST00000279550 TMEM30CPA0ZSE6 113 aa17.55■□□□□ 0.4
YBX3-202ENST00000279550 SPRY3O43610 288 aa17.55■□□□□ 0.4
YBX3-202ENST00000279550 CD3EP07766 207 aa17.55■□□□□ 0.4
YBX3-202ENST00000279550 SELENOVP59797 346 aa17.55■□□□□ 0.4
YBX3-202ENST00000279550 UBA52P62987 128 aaKnown RBP17.55■□□□□ 0.4
YBX3-202ENST00000279550 COL10A1Q03692 680 aa17.55■□□□□ 0.4
YBX3-202ENST00000279550 TESK1Q15569 626 aa17.55■□□□□ 0.4
YBX3-202ENST00000279550 SMIM21Q3B7S5 101 aa17.55■□□□□ 0.4
YBX3-202ENST00000279550 FOXRED2Q8IWF2 684 aa17.55■□□□□ 0.4
YBX3-202ENST00000279550 OR2V2Q96R30 315 aa17.55■□□□□ 0.4
YBX3-202ENST00000279550 TAF9BQ9HBM6 251 aa17.55■□□□□ 0.4
YBX3-202ENST00000279550 KIF25Q9UIL4 384 aa17.55■□□□□ 0.4
YBX3-202ENST00000279550 AUP1Q9Y679 476 aa17.55■□□□□ 0.4
YBX3-202ENST00000279550 LUMP51884 338 aaPredicted RBP17.55■□□□□ 0.4
YBX3-202ENST00000279550 AESQ08117 197 aa17.55■□□□□ 0.4
YBX3-202ENST00000279550 MOGAT3Q86VF5 341 aa17.55■□□□□ 0.4
YBX3-202ENST00000279550 ITLN1Q8WWA0 313 aa17.55■□□□□ 0.4
YBX3-202ENST00000279550 TMEM222Q9H0R3 208 aa17.55■□□□□ 0.4
YBX3-202ENST00000279550 DEFB108AA8MXU0 73 aa17.54■□□□□ 0.4
YBX3-202ENST00000279550 SRRM5B3KS81 715 aa17.54■□□□□ 0.4
YBX3-202ENST00000279550 ADIPOQQ15848 244 aa17.54■□□□□ 0.4
YBX3-202ENST00000279550 TMEM268Q5VZI3 342 aa17.54■□□□□ 0.4
YBX3-202ENST00000279550 SLC35E4Q6ICL7 350 aa17.54■□□□□ 0.4
YBX3-202ENST00000279550 SLC35G3Q8N808 338 aa17.54■□□□□ 0.4
YBX3-202ENST00000279550 BOLLQ8N9W6 283 aaKnown RBP17.54■□□□□ 0.4
YBX3-202ENST00000279550 OR1L1Q8NH94 360 aa17.54■□□□□ 0.4
YBX3-202ENST00000279550 FBXO9Q9UK97 447 aaPredicted RBP17.54■□□□□ 0.4
YBX3-202ENST00000279550 RALYQ9UKM9 306 aaKnown RBP17.54■□□□□ 0.4
YBX3-202ENST00000279550 RNF115Q9Y4L5 304 aa17.54■□□□□ 0.4
YBX3-202ENST00000279550 ZNF462Q96JM2 2506 aa17.53■□□□□ 0.4
YBX3-202ENST00000279550 TNFSF12O43508 249 aa17.53■□□□□ 0.4
YBX3-202ENST00000279550 RAB14P61106 215 aa17.53■□□□□ 0.4
YBX3-202ENST00000279550 GCSAMQ8N6F7 178 aa17.53■□□□□ 0.4
YBX3-202ENST00000279550 OR10V1Q8NGI7 309 aa17.53■□□□□ 0.4
YBX3-202ENST00000279550 OR10Z1Q8NGY1 313 aa17.53■□□□□ 0.4
YBX3-202ENST00000279550 LILRB1Q8NHL6 650 aaPredicted RBP17.53■□□□□ 0.4
YBX3-202ENST00000279550 ARPC5LQ9BPX5 153 aa17.53■□□□□ 0.4
YBX3-202ENST00000279550 ZNF471Q9BX82 626 aaPredicted RBP17.53■□□□□ 0.4
YBX3-202ENST00000279550 UBE2J1Q9Y385 318 aaPredicted RBP17.53■□□□□ 0.4
YBX3-202ENST00000279550 IGHV3OR15-7A0A075B7D8 119 aa17.52■□□□□ 0.4
YBX3-202ENST00000279550 C12orf77C9JDV5 145 aa17.52■□□□□ 0.4
YBX3-202ENST00000279550 PGLYRP1O75594 196 aaPredicted RBP17.52■□□□□ 0.4
YBX3-202ENST00000279550 NMBP08949 121 aa17.52■□□□□ 0.4
YBX3-202ENST00000279550 OR4A8P0C604 315 aa17.52■□□□□ 0.4
YBX3-202ENST00000279550 PSG2P11465 335 aa17.52■□□□□ 0.4
YBX3-202ENST00000279550 FAM53AQ6NSI3 398 aaPredicted RBP17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms