RNA–Protein interactions for RNA: ENST00000270142.10

SOD1-201, Transcript of superoxide dismutase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOD1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-201ENST00000270142 OGG1O15527 345 aa11.97□□□□□ -0.49
SOD1-201ENST00000270142 ZNF780AO75290 641 aaPredicted RBP11.97□□□□□ -0.49
SOD1-201ENST00000270142 GTF2F2P13984 249 aa11.97□□□□□ -0.49
SOD1-201ENST00000270142 IL3RAP26951 378 aa11.97□□□□□ -0.49
SOD1-201ENST00000270142 DCKP27707 260 aa11.97□□□□□ -0.49
SOD1-201ENST00000270142 CD1BP29016 333 aa11.97□□□□□ -0.49
SOD1-201ENST00000270142 LUMP51884 338 aaPredicted RBP11.97□□□□□ -0.49
SOD1-201ENST00000270142 GPR50Q13585 617 aa11.97□□□□□ -0.49
SOD1-201ENST00000270142 Q3ZCU0 254 aa11.97□□□□□ -0.49
SOD1-201ENST00000270142 CXorf66Q5JRM2 361 aaPredicted RBP11.97□□□□□ -0.49
SOD1-201ENST00000270142 ZNF439Q8NDP4 499 aa11.97□□□□□ -0.49
SOD1-201ENST00000270142 WWC2-AS2Q96NR7 200 aa11.97□□□□□ -0.49
SOD1-201ENST00000270142 S1PR3Q99500 378 aa11.97□□□□□ -0.49
SOD1-201ENST00000270142 HSPB9Q9BQS6 159 aa11.97□□□□□ -0.49
SOD1-201ENST00000270142 S100A14Q9HCY8 104 aa11.97□□□□□ -0.49
SOD1-201ENST00000270142 RCC2Q9P258 522 aaKnown RBP11.97□□□□□ -0.49
SOD1-201ENST00000270142 C12orf77C9JDV5 145 aa11.96□□□□□ -0.49
SOD1-201ENST00000270142 MOSP00540 346 aa11.96□□□□□ -0.49
SOD1-201ENST00000270142 ZNF137PP52743 207 aa11.96□□□□□ -0.49
SOD1-201ENST00000270142 F2RL1P55085 397 aa11.96□□□□□ -0.49
SOD1-201ENST00000270142 CFHR3Q02985 330 aa11.96□□□□□ -0.49
SOD1-201ENST00000270142 FOXE3Q13461 319 aa11.96□□□□□ -0.49
SOD1-201ENST00000270142 DCTN2Q13561 401 aaKnown RBP11.96□□□□□ -0.49
SOD1-201ENST00000270142 SYT6Q5T7P8 510 aaPredicted RBP11.96□□□□□ -0.49
SOD1-201ENST00000270142 TMPRSS11AQ6ZMR5 421 aa11.96□□□□□ -0.49
SOD1-201ENST00000270142 SLC25A48Q6ZT89 311 aaKnown RBP11.96□□□□□ -0.49
SOD1-201ENST00000270142 PQLC1Q8N2U9 271 aa11.96□□□□□ -0.49
SOD1-201ENST00000270142 RNF152Q8N8N0 203 aa11.96□□□□□ -0.49
SOD1-201ENST00000270142 OR10V1Q8NGI7 309 aa11.96□□□□□ -0.49
SOD1-201ENST00000270142 OR8U1Q8NH10 309 aa11.96□□□□□ -0.49
SOD1-201ENST00000270142 OR4K15Q8NH41 348 aa11.96□□□□□ -0.49
SOD1-201ENST00000270142 RASL11BQ9BPW5 248 aa11.96□□□□□ -0.49
SOD1-201ENST00000270142 GON7Q9BXV9 100 aa11.96□□□□□ -0.49
SOD1-201ENST00000270142 BABAM2Q9NXR7 383 aa11.96□□□□□ -0.49
SOD1-201ENST00000270142 CLEC2DQ9UHP7 191 aa11.96□□□□□ -0.49
SOD1-201ENST00000270142 COL7A1Q02388 2944 aa11.95□□□□□ -0.5
SOD1-201ENST00000270142 TRAV8-7A0A075B6U6 113 aa11.95□□□□□ -0.5
SOD1-201ENST00000270142 TXNL1O43396 289 aa11.95□□□□□ -0.5
SOD1-201ENST00000270142 RRP9O43818 475 aaKnown RBP11.95□□□□□ -0.5
SOD1-201ENST00000270142 ELANEP08246 267 aa11.95□□□□□ -0.5
SOD1-201ENST00000270142 VHLP40337 213 aa11.95□□□□□ -0.5
SOD1-201ENST00000270142 CDX1P47902 265 aaPredicted RBP11.95□□□□□ -0.5
SOD1-201ENST00000270142 ZNF134P52741 427 aa11.95□□□□□ -0.5
SOD1-201ENST00000270142 RPS11P62280 158 aaKnown RBP eCLIP11.95□□□□□ -0.5
SOD1-201ENST00000270142 KIR2DS1Q14954 304 aa11.95□□□□□ -0.5
SOD1-201ENST00000270142 STX19Q8N4C7 294 aa11.95□□□□□ -0.5
SOD1-201ENST00000270142 FAM71E2Q8N5Q1 922 aa11.95□□□□□ -0.5
SOD1-201ENST00000270142 ZFP41Q8N8Y5 198 aa11.95□□□□□ -0.5
SOD1-201ENST00000270142 ZNF555Q8NEP9 628 aa11.95□□□□□ -0.5
SOD1-201ENST00000270142 OR1L1Q8NH94 360 aa11.95□□□□□ -0.5
SOD1-201ENST00000270142 GHSRQ92847 366 aa11.95□□□□□ -0.5
SOD1-201ENST00000270142 MUL1Q969V5 352 aa11.95□□□□□ -0.5
SOD1-201ENST00000270142 CYYR1Q96J86 154 aa11.95□□□□□ -0.5
SOD1-201ENST00000270142 PGLYRP3Q96LB9 341 aa11.95□□□□□ -0.5
SOD1-201ENST00000270142 ETAA1Q9NY74 926 aa11.95□□□□□ -0.5
SOD1-201ENST00000270142 ZMAT5Q9UDW3 170 aaKnown RBP11.95□□□□□ -0.5
SOD1-201ENST00000270142 TRAPPC2LQ9UL33 140 aa11.95□□□□□ -0.5
SOD1-201ENST00000270142 MCRIP1C9JLW8 97 aa11.94□□□□□ -0.5
SOD1-201ENST00000270142 RAMP3O60896 148 aa11.94□□□□□ -0.5
SOD1-201ENST00000270142 GPX5O75715 221 aa11.94□□□□□ -0.5
SOD1-201ENST00000270142 HBZP02008 142 aa11.94□□□□□ -0.5
SOD1-201ENST00000270142 FSTP19883 344 aa11.94□□□□□ -0.5
SOD1-201ENST00000270142 VDAC1P21796 283 aa11.94□□□□□ -0.5
SOD1-201ENST00000270142 GP2P55259 537 aaKnown RBP11.94□□□□□ -0.5
SOD1-201ENST00000270142 GPR176Q14439 515 aa11.94□□□□□ -0.5
SOD1-201ENST00000270142 Q499Y3 187 aa11.94□□□□□ -0.5
SOD1-201ENST00000270142 CT45A1Q5HYN5 189 aa11.94□□□□□ -0.5
SOD1-201ENST00000270142 DMKNQ6E0U4 476 aaPredicted RBP11.94□□□□□ -0.5
SOD1-201ENST00000270142 GLIPR1L1Q6UWM5 242 aa11.94□□□□□ -0.5
SOD1-201ENST00000270142 PRR18Q8N4B5 295 aa11.94□□□□□ -0.5
SOD1-201ENST00000270142 OR8H1Q8NGG4 311 aa11.94□□□□□ -0.5
SOD1-201ENST00000270142 OR5M8Q8NGP6 311 aa11.94□□□□□ -0.5
SOD1-201ENST00000270142 CT45A3Q8NHU0 189 aa11.94□□□□□ -0.5
SOD1-201ENST00000270142 PRR25Q96S07 402 aa11.94□□□□□ -0.5
SOD1-201ENST00000270142 SPACA1Q9HBV2 294 aa11.94□□□□□ -0.5
SOD1-201ENST00000270142 SMPD3Q9NY59 655 aaPredicted RBP11.94□□□□□ -0.5
SOD1-201ENST00000270142 GNG12Q9UBI6 72 aa11.94□□□□□ -0.5
SOD1-201ENST00000270142 DIMT1Q9UNQ2 313 aaKnown RBP11.94□□□□□ -0.5
SOD1-201ENST00000270142 MRPS28Q9Y2Q9 187 aaKnown RBP11.94□□□□□ -0.5
SOD1-201ENST00000270142 EXOSC1Q9Y3B2 195 aaKnown RBP11.94□□□□□ -0.5
SOD1-201ENST00000270142 A0A1W2PPK0 400 aa11.93□□□□□ -0.5
SOD1-201ENST00000270142 IRGMA1A4Y4 181 aa11.93□□□□□ -0.5
SOD1-201ENST00000270142 SPINT2O43291 252 aa11.93□□□□□ -0.5
SOD1-201ENST00000270142 IGHG4P01861 327 aa11.93□□□□□ -0.5
SOD1-201ENST00000270142 MYL12AP19105 171 aa11.93□□□□□ -0.5
SOD1-201ENST00000270142 SOX6P35712 828 aa11.93□□□□□ -0.5
SOD1-201ENST00000270142 YIF1BQ5BJH7 314 aa11.93□□□□□ -0.5
SOD1-201ENST00000270142 C6orf183Q5T699 404 aa11.93□□□□□ -0.5
SOD1-201ENST00000270142 C9orf66Q5T8R8 295 aa11.93□□□□□ -0.5
SOD1-201ENST00000270142 AWAT2Q6E213 333 aa11.93□□□□□ -0.5
SOD1-201ENST00000270142 RAB12Q6IQ22 244 aa11.93□□□□□ -0.5
SOD1-201ENST00000270142 C10orf67Q8IYJ2 551 aa11.93□□□□□ -0.5
SOD1-201ENST00000270142 GAPTQ8N292 157 aa11.93□□□□□ -0.5
SOD1-201ENST00000270142 JAGN1Q8N5M9 183 aa11.93□□□□□ -0.5
SOD1-201ENST00000270142 C4orf3Q8WVX3 66 aa11.93□□□□□ -0.5
SOD1-201ENST00000270142 KCTD7Q96MP8 289 aa11.93□□□□□ -0.5
SOD1-201ENST00000270142 BANF2Q9H503 90 aa11.93□□□□□ -0.5
SOD1-201ENST00000270142 CKLFQ9UBR5 152 aa11.93□□□□□ -0.5
SOD1-201ENST00000270142 LSM4Q9Y4Z0 139 aaKnown RBP11.93□□□□□ -0.5
SOD1-201ENST00000270142 TRBV5-7A0A0A0MS05 114 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms