RNA–Protein interactions for RNA: ENST00000264346.11

HERC6-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERC6, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-201ENST00000264346 TLE4Q04727 773 aa10.8□□□□□ -0.68
HERC6-201ENST00000264346 HGFACQ04756 655 aa10.8□□□□□ -0.68
HERC6-201ENST00000264346 ZNF345Q14585 488 aa10.8□□□□□ -0.68
HERC6-201ENST00000264346 RIPPLY2Q5TAB7 128 aa10.8□□□□□ -0.68
HERC6-201ENST00000264346 PRAMEF5Q5TYX0 476 aa10.8□□□□□ -0.68
HERC6-201ENST00000264346 CLEC18CQ8NCF0 446 aa10.8□□□□□ -0.68
HERC6-201ENST00000264346 ADGRG7Q96K78 797 aa10.8□□□□□ -0.68
HERC6-201ENST00000264346 OR2D2Q9H210 308 aa10.8□□□□□ -0.68
HERC6-201ENST00000264346 TAAR3PQ9P1P4 343 aa10.8□□□□□ -0.68
HERC6-201ENST00000264346 IGKV1-27A0A075B6S5 117 aa10.8□□□□□ -0.68
HERC6-201ENST00000264346 UBE2L5PA0A1B0GUS4 154 aa10.8□□□□□ -0.68
HERC6-201ENST00000264346 hCG_38984A0A1B0GV85 526 aa10.8□□□□□ -0.68
HERC6-201ENST00000264346 H3F3AP84243 136 aa10.8□□□□□ -0.68
HERC6-201ENST00000264346 ZNF383Q8NA42 475 aa10.8□□□□□ -0.68
HERC6-201ENST00000264346 MARS2Q96GW9 593 aaKnown RBP10.8□□□□□ -0.68
HERC6-201ENST00000264346 LURAP1Q96LR2 239 aa10.8□□□□□ -0.68
HERC6-201ENST00000264346 TECTBQ96PL2 329 aa10.8□□□□□ -0.68
HERC6-201ENST00000264346 GCM1Q9NP62 436 aa10.8□□□□□ -0.68
HERC6-201ENST00000264346 TLN1Q9Y490 2541 aaKnown RBP10.8□□□□□ -0.68
HERC6-201ENST00000264346 A0A1W2PPE2 198 aa10.79□□□□□ -0.68
HERC6-201ENST00000264346 A0A1W2PPV4 95 aa10.79□□□□□ -0.68
HERC6-201ENST00000264346 RPL36A-HNRNPH2H7BZ11 118 aa10.79□□□□□ -0.68
HERC6-201ENST00000264346 SRSF10O75494 262 aaKnown RBP10.79□□□□□ -0.68
HERC6-201ENST00000264346 IFNA1P01562 189 aa10.79□□□□□ -0.68
HERC6-201ENST00000264346 CD8AP01732 235 aa10.79□□□□□ -0.68
HERC6-201ENST00000264346 CELA3BP08861 270 aa10.79□□□□□ -0.68
HERC6-201ENST00000264346 ZNF708P17019 499 aa10.79□□□□□ -0.68
HERC6-201ENST00000264346 LPAR6P43657 344 aa10.79□□□□□ -0.68
HERC6-201ENST00000264346 Q3ZCU0 254 aa10.79□□□□□ -0.68
HERC6-201ENST00000264346 PDLIM3Q53GG5 364 aaPredicted RBP10.79□□□□□ -0.68
HERC6-201ENST00000264346 GGNQ86UU5 652 aa10.79□□□□□ -0.68
HERC6-201ENST00000264346 TP53RKQ96S44 253 aa10.79□□□□□ -0.68
HERC6-201ENST00000264346 NIPSNAP3BQ9BS92 247 aa10.79□□□□□ -0.68
HERC6-201ENST00000264346 OSGIN2Q9Y236 505 aa10.79□□□□□ -0.68
HERC6-201ENST00000264346 V9GYS6 101 aa10.79□□□□□ -0.68
HERC6-201ENST00000264346 NEURL1O76050 574 aa10.79□□□□□ -0.68
HERC6-201ENST00000264346 TFF1P04155 84 aa10.79□□□□□ -0.68
HERC6-201ENST00000264346 ACP1P24666 158 aa10.79□□□□□ -0.68
HERC6-201ENST00000264346 CEACAM21Q3KPI0 293 aa10.79□□□□□ -0.68
HERC6-201ENST00000264346 TMEM211Q6ICI0 200 aa10.79□□□□□ -0.68
HERC6-201ENST00000264346 FDCSPQ8NFU4 85 aa10.79□□□□□ -0.68
HERC6-201ENST00000264346 OR5A2Q8NGI9 324 aa10.79□□□□□ -0.68
HERC6-201ENST00000264346 SH3BGRL3Q9H299 93 aa10.79□□□□□ -0.68
HERC6-201ENST00000264346 IGF2RP11717 2491 aa10.79□□□□□ -0.68
HERC6-201ENST00000264346 LRP5LA4QPB2 252 aa10.79□□□□□ -0.68
HERC6-201ENST00000264346 OR5B21A6NL26 309 aa10.79□□□□□ -0.68
HERC6-201ENST00000264346 VSTM5A8MXK1 200 aa10.79□□□□□ -0.68
HERC6-201ENST00000264346 F8VVB4 439 aa10.79□□□□□ -0.68
HERC6-201ENST00000264346 F8VWA3 439 aa10.79□□□□□ -0.68
HERC6-201ENST00000264346 OPN1MWP04001 364 aa10.79□□□□□ -0.68
HERC6-201ENST00000264346 OPN1MW2P0DN77 364 aa10.79□□□□□ -0.68
HERC6-201ENST00000264346 OPN1MW3P0DN78 364 aa10.79□□□□□ -0.68
HERC6-201ENST00000264346 NTF4P34130 210 aa10.79□□□□□ -0.68
HERC6-201ENST00000264346 NKX6-1P78426 367 aaPredicted RBP10.79□□□□□ -0.68
HERC6-201ENST00000264346 SRSF6Q13247 344 aaKnown RBP10.79□□□□□ -0.68
HERC6-201ENST00000264346 ADIRFQ15847 76 aa10.79□□□□□ -0.68
HERC6-201ENST00000264346 KCNMB1Q16558 191 aa10.79□□□□□ -0.68
HERC6-201ENST00000264346 UBAC2Q8NBM4 344 aa10.79□□□□□ -0.68
HERC6-201ENST00000264346 NECAP1Q8NC96 275 aa10.79□□□□□ -0.68
HERC6-201ENST00000264346 RPUSD4Q96CM3 377 aaKnown RBP10.79□□□□□ -0.68
HERC6-201ENST00000264346 MPC1Q9Y5U8 109 aa10.79□□□□□ -0.68
HERC6-201ENST00000264346 KPTNQ9Y664 436 aa10.79□□□□□ -0.68
HERC6-201ENST00000264346 MUC22E2RYF6 1773 aaPredicted RBP10.79□□□□□ -0.68
HERC6-201ENST00000264346 GPR12P47775 334 aa10.78□□□□□ -0.68
HERC6-201ENST00000264346 EWSR1Q01844 656 aaKnown RBP eCLIP10.78□□□□□ -0.68
HERC6-201ENST00000264346 CDPF1Q6NVV7 123 aa10.78□□□□□ -0.68
HERC6-201ENST00000264346 HIST2H3AQ71DI3 136 aa10.78□□□□□ -0.68
HERC6-201ENST00000264346 FAM185AQ8N0U4 392 aa10.78□□□□□ -0.68
HERC6-201ENST00000264346 OR4A16Q8NH70 328 aa10.78□□□□□ -0.68
HERC6-201ENST00000264346 LRRC29Q8WV35 223 aa10.78□□□□□ -0.68
HERC6-201ENST00000264346 LHX4Q969G2 390 aa10.78□□□□□ -0.68
HERC6-201ENST00000264346 RNF126Q9BV68 326 aa10.78□□□□□ -0.68
HERC6-201ENST00000264346 DYNLRB1Q9NP97 96 aa10.78□□□□□ -0.68
HERC6-201ENST00000264346 IGHV3OR15-7A0A075B7D8 119 aa10.78□□□□□ -0.68
HERC6-201ENST00000264346 CRYM-AS1A6NIL9 109 aa10.78□□□□□ -0.68
HERC6-201ENST00000264346 RNF212BA8MTL3 300 aa10.78□□□□□ -0.68
HERC6-201ENST00000264346 FTH1P19P0C7X4 201 aa10.78□□□□□ -0.68
HERC6-201ENST00000264346 HKR1P10072 659 aa10.78□□□□□ -0.68
HERC6-201ENST00000264346 CSRP2Q16527 193 aa10.78□□□□□ -0.68
HERC6-201ENST00000264346 RIMS4Q9H426 269 aaPredicted RBP10.78□□□□□ -0.68
HERC6-201ENST00000264346 OPA3Q9H6K4 179 aa10.78□□□□□ -0.68
HERC6-201ENST00000264346 OR1A1Q9P1Q5 309 aa10.78□□□□□ -0.68
HERC6-201ENST00000264346 RCC2Q9P258 522 aaKnown RBP10.78□□□□□ -0.68
HERC6-201ENST00000264346 NOTCH3Q9UM47 2321 aa10.78□□□□□ -0.68
HERC6-201ENST00000264346 PHOX2AO14813 284 aa10.78□□□□□ -0.68
HERC6-201ENST00000264346 DFFBO76075 338 aa10.78□□□□□ -0.68
HERC6-201ENST00000264346 PMELP40967 661 aa10.78□□□□□ -0.68
HERC6-201ENST00000264346 FGF12P61328 243 aa10.78□□□□□ -0.68
HERC6-201ENST00000264346 CACNA1AO00555 2505 aa10.78□□□□□ -0.68
HERC6-201ENST00000264346 WIPF3A6NGB9 483 aa10.77□□□□□ -0.68
HERC6-201ENST00000264346 CLN5O75503 358 aa10.77□□□□□ -0.68
HERC6-201ENST00000264346 MDKP21741 143 aaPredicted RBP10.77□□□□□ -0.68
HERC6-201ENST00000264346 VDAC1P21796 283 aa10.77□□□□□ -0.68
HERC6-201ENST00000264346 PPP1CCP36873 323 aaKnown RBP10.77□□□□□ -0.68
HERC6-201ENST00000264346 HABP2Q14520 560 aaPredicted RBP10.77□□□□□ -0.68
HERC6-201ENST00000264346 HIST2H3PS2Q5TEC6 136 aa10.77□□□□□ -0.68
HERC6-201ENST00000264346 TOLLIPQ9H0E2 274 aa10.77□□□□□ -0.68
HERC6-201ENST00000264346 LIN7CQ9NUP9 197 aaKnown RBP10.77□□□□□ -0.68
HERC6-201ENST00000264346 MTCH1Q9NZJ7 389 aa10.77□□□□□ -0.68
HERC6-201ENST00000264346 FOXD3Q9UJU5 478 aaPredicted RBP10.77□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms