RNA–Protein interactions for RNA: ENST00000263598.6

LCN1-201, Transcript of lipocalin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCN1, Length 776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1-201ENST00000263598 PELI1Q96FA3 418 aa6.96□□□□□ -1.3
LCN1-201ENST00000263598 C4orf36Q96KX1 117 aa6.96□□□□□ -1.3
LCN1-201ENST00000263598 OR5B12Q96R08 314 aa6.96□□□□□ -1.3
LCN1-201ENST00000263598 TSC22D3Q99576 134 aa6.96□□□□□ -1.3
LCN1-201ENST00000263598 GABARAPL3Q9BY60 117 aa6.96□□□□□ -1.3
LCN1-201ENST00000263598 OR51J1Q9H342 316 aa6.96□□□□□ -1.3
LCN1-201ENST00000263598 IFT22Q9H7X7 185 aa6.96□□□□□ -1.3
LCN1-201ENST00000263598 RAB9BQ9NP90 201 aa6.96□□□□□ -1.3
LCN1-201ENST00000263598 GFOD1Q9NXC2 390 aa6.96□□□□□ -1.3
LCN1-201ENST00000263598 GAR1Q9NY12 217 aaKnown RBP6.96□□□□□ -1.3
LCN1-201ENST00000263598 ST3GAL6Q9Y274 331 aa6.96□□□□□ -1.3
LCN1-201ENST00000263598 TENM2Q9NT68 2774 aa6.96□□□□□ -1.3
LCN1-201ENST00000263598 TMEM212A6NML5 194 aa6.95□□□□□ -1.3
LCN1-201ENST00000263598 SNTNA6NMZ2 147 aa6.95□□□□□ -1.3
LCN1-201ENST00000263598 J3QRE1 110 aa6.95□□□□□ -1.3
LCN1-201ENST00000263598 ORC5O43913 435 aa6.95□□□□□ -1.3
LCN1-201ENST00000263598 CSTBP04080 98 aaKnown RBP6.95□□□□□ -1.3
LCN1-201ENST00000263598 SLC2A2P11168 524 aaPredicted RBP6.95□□□□□ -1.3
LCN1-201ENST00000263598 MYF6P23409 242 aa6.95□□□□□ -1.3
LCN1-201ENST00000263598 PPIFP30405 207 aaKnown RBP6.95□□□□□ -1.3
LCN1-201ENST00000263598 HSPA13P48723 471 aa6.95□□□□□ -1.3
LCN1-201ENST00000263598 ZNF137PP52743 207 aa6.95□□□□□ -1.3
LCN1-201ENST00000263598 GNB1P62873 340 aa6.95□□□□□ -1.3
LCN1-201ENST00000263598 GALEQ14376 348 aa6.95□□□□□ -1.3
LCN1-201ENST00000263598 MMDQ15546 238 aa6.95□□□□□ -1.3
LCN1-201ENST00000263598 TMEM30BQ3MIR4 351 aa6.95□□□□□ -1.3
LCN1-201ENST00000263598 NHLRC3Q5JS37 347 aa6.95□□□□□ -1.3
LCN1-201ENST00000263598 MEDAGQ5VYS4 303 aa6.95□□□□□ -1.3
LCN1-201ENST00000263598 SLC25A48Q6ZT89 311 aaKnown RBP6.95□□□□□ -1.3
LCN1-201ENST00000263598 LINC00596Q86U02 117 aa6.95□□□□□ -1.3
LCN1-201ENST00000263598 STX19Q8N4C7 294 aa6.95□□□□□ -1.3
LCN1-201ENST00000263598 OR52N1Q8NH53 320 aa6.95□□□□□ -1.3
LCN1-201ENST00000263598 OR5AK2Q8NH90 309 aa6.95□□□□□ -1.3
LCN1-201ENST00000263598 NEK7Q8TDX7 302 aa6.95□□□□□ -1.3
LCN1-201ENST00000263598 CCDC107Q8WV48 283 aa6.95□□□□□ -1.3
LCN1-201ENST00000263598 ISOC1Q96CN7 298 aa6.95□□□□□ -1.3
LCN1-201ENST00000263598 METTL9Q9H1A3 318 aa6.95□□□□□ -1.3
LCN1-201ENST00000263598 KLK15Q9H2R5 256 aa6.95□□□□□ -1.3
LCN1-201ENST00000263598 Q9H521 79 aa6.95□□□□□ -1.3
LCN1-201ENST00000263598 VCX3AQ9NNX9 186 aa6.95□□□□□ -1.3
LCN1-201ENST00000263598 GNG12Q9UBI6 72 aa6.95□□□□□ -1.3
LCN1-201ENST00000263598 WSB1Q9Y6I7 421 aa6.95□□□□□ -1.3
LCN1-201ENST00000263598 EPPK1P58107 5090 aaKnown RBP6.95□□□□□ -1.3
LCN1-201ENST00000263598 STAB2Q8WWQ8 2551 aa6.95□□□□□ -1.3
LCN1-201ENST00000263598 IGHV3-43A0A0B4J1X8 118 aa6.94□□□□□ -1.3
LCN1-201ENST00000263598 TRAV41A0A0B4J266 112 aa6.94□□□□□ -1.3
LCN1-201ENST00000263598 SMIM31A0A1B0GVY4 71 aa6.94□□□□□ -1.3
LCN1-201ENST00000263598 DPPA5A6NC42 116 aa6.94□□□□□ -1.3
LCN1-201ENST00000263598 LINC01619G3V211 115 aa6.94□□□□□ -1.3
LCN1-201ENST00000263598 G3V318 75 aa6.94□□□□□ -1.3
LCN1-201ENST00000263598 AIPO00170 330 aa6.94□□□□□ -1.3
LCN1-201ENST00000263598 LDLRAD4O15165 306 aa6.94□□□□□ -1.3
LCN1-201ENST00000263598 ATP6V0E1O15342 81 aa6.94□□□□□ -1.3
LCN1-201ENST00000263598 SPINT2O43291 252 aa6.94□□□□□ -1.3
LCN1-201ENST00000263598 IGLV1-40P01703 118 aa6.94□□□□□ -1.3
LCN1-201ENST00000263598 OR8U9P0C7N5 309 aa6.94□□□□□ -1.3
LCN1-201ENST00000263598 IGHV3-43DP0DP04 118 aa6.94□□□□□ -1.3
LCN1-201ENST00000263598 FCGR1AP12314 374 aa6.94□□□□□ -1.3
LCN1-201ENST00000263598 RAB9AP51151 201 aa6.94□□□□□ -1.3
LCN1-201ENST00000263598 RBM11P57052 281 aaKnown RBP6.94□□□□□ -1.3
LCN1-201ENST00000263598 MRPL28Q13084 256 aaKnown RBP6.94□□□□□ -1.3
LCN1-201ENST00000263598 KIAA0141Q14154 515 aaPredicted RBP6.94□□□□□ -1.3
LCN1-201ENST00000263598 MPV17LQ2QL34 196 aa6.94□□□□□ -1.3
LCN1-201ENST00000263598 SLC25A30Q5SVS4 291 aa6.94□□□□□ -1.3
LCN1-201ENST00000263598 ATAD3CQ5T2N8 411 aa6.94□□□□□ -1.3
LCN1-201ENST00000263598 FAM53AQ6NSI3 398 aaPredicted RBP6.94□□□□□ -1.3
LCN1-201ENST00000263598 ASCL4Q6XD76 172 aa6.94□□□□□ -1.3
LCN1-201ENST00000263598 ZNF497Q6ZNH5 498 aa6.94□□□□□ -1.3
LCN1-201ENST00000263598 AMIGO2Q86SJ2 522 aa6.94□□□□□ -1.3
LCN1-201ENST00000263598 SYS1Q8N2H4 156 aa6.94□□□□□ -1.3
LCN1-201ENST00000263598 UBALD1Q8TB05 177 aa6.94□□□□□ -1.3
LCN1-201ENST00000263598 DLX4Q92988 240 aaPredicted RBP6.94□□□□□ -1.3
LCN1-201ENST00000263598 S100A13Q99584 98 aa6.94□□□□□ -1.3
LCN1-201ENST00000263598 TM2D3Q9BRN9 247 aa6.94□□□□□ -1.3
LCN1-201ENST00000263598 ALG8Q9BVK2 526 aa6.94□□□□□ -1.3
LCN1-201ENST00000263598 PARP11Q9NR21 331 aa6.94□□□□□ -1.3
LCN1-201ENST00000263598 PAK1IP1Q9NWT1 392 aaPredicted RBP6.94□□□□□ -1.3
LCN1-201ENST00000263598 IL36GQ9NZH8 169 aa6.94□□□□□ -1.3
LCN1-201ENST00000263598 TRAPPC2LQ9UL33 140 aa6.94□□□□□ -1.3
LCN1-201ENST00000263598 ING4Q9UNL4 249 aa6.94□□□□□ -1.3
LCN1-201ENST00000263598 ERGIC3Q9Y282 383 aa6.94□□□□□ -1.3
LCN1-201ENST00000263598 MRPS28Q9Y2Q9 187 aaKnown RBP6.94□□□□□ -1.3
LCN1-201ENST00000263598 AP4S1Q9Y587 144 aa6.94□□□□□ -1.3
LCN1-201ENST00000263598 HUWE1Q7Z6Z7 4374 aaKnown RBP6.93□□□□□ -1.3
LCN1-201ENST00000263598 FAM90A10PA6NDY2 464 aa6.93□□□□□ -1.3
LCN1-201ENST00000263598 TRIM64CA6NLI5 447 aa6.93□□□□□ -1.3
LCN1-201ENST00000263598 GEMIN2O14893 280 aaKnown RBP6.93□□□□□ -1.3
LCN1-201ENST00000263598 SLC31A2O15432 143 aa6.93□□□□□ -1.3
LCN1-201ENST00000263598 LANCL1O43813 399 aa6.93□□□□□ -1.3
LCN1-201ENST00000263598 ZNF780AO75290 641 aaPredicted RBP6.93□□□□□ -1.3
LCN1-201ENST00000263598 CDRT1O95170 752 aa6.93□□□□□ -1.3
LCN1-201ENST00000263598 HLA-DRB1P01911 266 aa6.93□□□□□ -1.3
LCN1-201ENST00000263598 MT-ND4P03905 459 aa6.93□□□□□ -1.3
LCN1-201ENST00000263598 CD2P06729 351 aa6.93□□□□□ -1.3
LCN1-201ENST00000263598 GBX2P52951 348 aaPredicted RBP6.93□□□□□ -1.3
LCN1-201ENST00000263598 SLURP1P55000 103 aa6.93□□□□□ -1.3
LCN1-201ENST00000263598 SNRPGP62308 76 aaKnown RBP6.93□□□□□ -1.3
LCN1-201ENST00000263598 LSAMPQ13449 338 aa6.93□□□□□ -1.3
LCN1-201ENST00000263598 SRSF7Q16629 238 aaKnown RBP eCLIP6.93□□□□□ -1.3
LCN1-201ENST00000263598 CT45A1Q5HYN5 189 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms