RNA–Protein interactions for RNA: ENST00000261368.12

SNCAIP-202, Transcript of synuclein alpha interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCAIP, Length 3,745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-202ENST00000261368 DEPPQ9NTK1 212 aa13.85□□□□□ -0.19
SNCAIP-202ENST00000261368 KRASP01116 189 aa13.85□□□□□ -0.19
SNCAIP-202ENST00000261368 CTXN2P0C2S0 81 aa13.85□□□□□ -0.19
SNCAIP-202ENST00000261368 SPINK9Q5DT21 86 aa13.85□□□□□ -0.19
SNCAIP-202ENST00000261368 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.85□□□□□ -0.19
SNCAIP-202ENST00000261368 VSIRQ9H7M9 311 aa13.85□□□□□ -0.19
SNCAIP-202ENST00000261368 COL4A2P08572 1712 aa13.85□□□□□ -0.19
SNCAIP-202ENST00000261368 A0A0G2JRQ6 117 aa13.85□□□□□ -0.19
SNCAIP-202ENST00000261368 ZNF705GA8MUZ8 300 aaPredicted RBP13.85□□□□□ -0.19
SNCAIP-202ENST00000261368 DKK1O94907 266 aa13.85□□□□□ -0.19
SNCAIP-202ENST00000261368 HERPUD1Q15011 391 aa13.85□□□□□ -0.19
SNCAIP-202ENST00000261368 FOXL2NBQ6ZUU3 175 aa13.85□□□□□ -0.19
SNCAIP-202ENST00000261368 GGNQ86UU5 652 aa13.85□□□□□ -0.19
SNCAIP-202ENST00000261368 APOBEC3DQ96AK3 386 aaPredicted RBP13.85□□□□□ -0.19
SNCAIP-202ENST00000261368 SMIM7Q9BQ49 75 aa13.85□□□□□ -0.19
SNCAIP-202ENST00000261368 LY6G6EA0A0G2JKS1 128 aa13.84□□□□□ -0.19
SNCAIP-202ENST00000261368 HBG1P69891 147 aa13.84□□□□□ -0.19
SNCAIP-202ENST00000261368 HBG2P69892 147 aa13.84□□□□□ -0.19
SNCAIP-202ENST00000261368 DCAF12Q5T6F0 453 aa13.84□□□□□ -0.19
SNCAIP-202ENST00000261368 FAM58AQ8N1B3 248 aa13.84□□□□□ -0.19
SNCAIP-202ENST00000261368 B4GALT7Q9UBV7 327 aa13.84□□□□□ -0.19
SNCAIP-202ENST00000261368 U3KQA8 63 aa13.84□□□□□ -0.19
SNCAIP-202ENST00000261368 PINLYPA6NC86 204 aa13.84□□□□□ -0.19
SNCAIP-202ENST00000261368 SYNGR2O43760 224 aa13.84□□□□□ -0.19
SNCAIP-202ENST00000261368 DUSP3P51452 185 aaPredicted RBP13.84□□□□□ -0.19
SNCAIP-202ENST00000261368 BAXQ07812 192 aa13.84□□□□□ -0.19
SNCAIP-202ENST00000261368 PLPPR2Q96GM1 343 aa13.84□□□□□ -0.19
SNCAIP-202ENST00000261368 ATP23Q9Y6H3 246 aa13.84□□□□□ -0.19
SNCAIP-202ENST00000261368 IFNA1P01562 189 aa13.84□□□□□ -0.19
SNCAIP-202ENST00000261368 HOXB1P14653 301 aaPredicted RBP13.84□□□□□ -0.19
SNCAIP-202ENST00000261368 ELOBQ15370 118 aa13.84□□□□□ -0.19
SNCAIP-202ENST00000261368 WDR25Q64LD2 544 aaPredicted RBP13.84□□□□□ -0.19
SNCAIP-202ENST00000261368 CDPF1Q6NVV7 123 aa13.84□□□□□ -0.19
SNCAIP-202ENST00000261368 CXorf67Q86X51 503 aaPredicted RBP13.84□□□□□ -0.19
SNCAIP-202ENST00000261368 ADGRG7Q96K78 797 aa13.84□□□□□ -0.19
SNCAIP-202ENST00000261368 SCRT1Q9BWW7 348 aa13.84□□□□□ -0.19
SNCAIP-202ENST00000261368 SLC25A22Q9H936 323 aa13.84□□□□□ -0.19
SNCAIP-202ENST00000261368 UFSP2Q9NUQ7 469 aa13.84□□□□□ -0.19
SNCAIP-202ENST00000261368 OR2W1Q9Y3N9 320 aa13.84□□□□□ -0.19
SNCAIP-202ENST00000261368 PRR14LQ5THK1 2151 aa13.83□□□□□ -0.2
SNCAIP-202ENST00000261368 LOC102723996A0A087X1L8 192 aa13.83□□□□□ -0.2
SNCAIP-202ENST00000261368 NXPH2O95156 264 aa13.83□□□□□ -0.2
SNCAIP-202ENST00000261368 PAX6P26367 422 aa13.83□□□□□ -0.2
SNCAIP-202ENST00000261368 CDX1P47902 265 aaPredicted RBP13.83□□□□□ -0.2
SNCAIP-202ENST00000261368 ZNF816Q0VGE8 651 aaPredicted RBP13.83□□□□□ -0.2
SNCAIP-202ENST00000261368 TMEM42Q69YG0 159 aa13.83□□□□□ -0.2
SNCAIP-202ENST00000261368 OR10V1Q8NGI7 309 aa13.83□□□□□ -0.2
SNCAIP-202ENST00000261368 HLA-CQ95604 372 aa13.83□□□□□ -0.2
SNCAIP-202ENST00000261368 TMEM56Q96MV1 263 aa13.83□□□□□ -0.2
SNCAIP-202ENST00000261368 TCFL5Q9UL49 500 aa13.83□□□□□ -0.2
SNCAIP-202ENST00000261368 TMEM56-RWDD3S4R434 201 aa13.83□□□□□ -0.2
SNCAIP-202ENST00000261368 WDFY3Q8IZQ1 3526 aa13.83□□□□□ -0.2
SNCAIP-202ENST00000261368 GVINP1Q7Z2Y8 2422 aa13.83□□□□□ -0.2
SNCAIP-202ENST00000261368 MAP1LC3B2A6NCE7 125 aa13.83□□□□□ -0.2
SNCAIP-202ENST00000261368 IGHV2-5P01817 119 aa13.83□□□□□ -0.2
SNCAIP-202ENST00000261368 PYY3Q5JQD4 70 aa13.83□□□□□ -0.2
SNCAIP-202ENST00000261368 CLDND2Q8NHS1 167 aa13.83□□□□□ -0.2
SNCAIP-202ENST00000261368 TECTBQ96PL2 329 aa13.83□□□□□ -0.2
SNCAIP-202ENST00000261368 MAP1LC3BQ9GZQ8 125 aa13.83□□□□□ -0.2
SNCAIP-202ENST00000261368 LAMP3Q9UQV4 416 aa13.83□□□□□ -0.2
SNCAIP-202ENST00000261368 SMCO3A2RU48 225 aa13.82□□□□□ -0.2
SNCAIP-202ENST00000261368 CLEC18AA5D8T8 446 aa13.82□□□□□ -0.2
SNCAIP-202ENST00000261368 CLDN34H7C241 214 aa13.82□□□□□ -0.2
SNCAIP-202ENST00000261368 K7ESF4 209 aa13.82□□□□□ -0.2
SNCAIP-202ENST00000261368 RHBDL1O75783 438 aa13.82□□□□□ -0.2
SNCAIP-202ENST00000261368 HSPB1P04792 205 aaKnown RBP13.82□□□□□ -0.2
SNCAIP-202ENST00000261368 PGA5P0DJD9 388 aa13.82□□□□□ -0.2
SNCAIP-202ENST00000261368 UCP1P25874 307 aa13.82□□□□□ -0.2
SNCAIP-202ENST00000261368 FOXO1Q12778 655 aa13.82□□□□□ -0.2
SNCAIP-202ENST00000261368 CLN3Q13286 438 aa13.82□□□□□ -0.2
SNCAIP-202ENST00000261368 C20orf204Q6ZNR8 217 aa13.82□□□□□ -0.2
SNCAIP-202ENST00000261368 CLEC18CQ8NCF0 446 aa13.82□□□□□ -0.2
SNCAIP-202ENST00000261368 OR5B12Q96R08 314 aa13.82□□□□□ -0.2
SNCAIP-202ENST00000261368 USF3Q68DE3 2245 aa13.82□□□□□ -0.2
SNCAIP-202ENST00000261368 TRGC1P0CF51 173 aa13.82□□□□□ -0.2
SNCAIP-202ENST00000261368 SELEP16581 610 aa13.82□□□□□ -0.2
SNCAIP-202ENST00000261368 CEACAM21Q3KPI0 293 aa13.82□□□□□ -0.2
SNCAIP-202ENST00000261368 FREM2Q5SZK8 3169 aa13.82□□□□□ -0.2
SNCAIP-202ENST00000261368 LILRA1O75019 489 aa13.82□□□□□ -0.2
SNCAIP-202ENST00000261368 HOXA5P20719 270 aa13.82□□□□□ -0.2
SNCAIP-202ENST00000261368 MAGEA5P43359 124 aa13.82□□□□□ -0.2
SNCAIP-202ENST00000261368 ID3Q02535 119 aa13.82□□□□□ -0.2
SNCAIP-202ENST00000261368 COL19A1Q14993 1142 aa13.82□□□□□ -0.2
SNCAIP-202ENST00000261368 SDSLQ96GA7 329 aa13.82□□□□□ -0.2
SNCAIP-202ENST00000261368 IGKV1-6A0A0C4DH72 117 aa13.81□□□□□ -0.2
SNCAIP-202ENST00000261368 A0A0U1RQK1 487 aa13.81□□□□□ -0.2
SNCAIP-202ENST00000261368 PHOX2AO14813 284 aa13.81□□□□□ -0.2
SNCAIP-202ENST00000261368 HIST1H2BKO60814 126 aa13.81□□□□□ -0.2
SNCAIP-202ENST00000261368 HIST1H2BJP06899 126 aa13.81□□□□□ -0.2
SNCAIP-202ENST00000261368 HIST1H2BOP23527 126 aa13.81□□□□□ -0.2
SNCAIP-202ENST00000261368 HIST1H2BBP33778 126 aa13.81□□□□□ -0.2
SNCAIP-202ENST00000261368 CEACAM6P40199 344 aa13.81□□□□□ -0.2
SNCAIP-202ENST00000261368 HIST1H2BDP58876 126 aa13.81□□□□□ -0.2
SNCAIP-202ENST00000261368 B3GALT5-AS1P59052 145 aa13.81□□□□□ -0.2
SNCAIP-202ENST00000261368 STARD6P59095 220 aa13.81□□□□□ -0.2
SNCAIP-202ENST00000261368 ERVS71-1P61550 626 aa13.81□□□□□ -0.2
SNCAIP-202ENST00000261368 HIST1H2BCP62807 126 aa13.81□□□□□ -0.2
SNCAIP-202ENST00000261368 HIST2H2BEQ16778 126 aa13.81□□□□□ -0.2
SNCAIP-202ENST00000261368 KHDC3LQ587J8 217 aa13.81□□□□□ -0.2
SNCAIP-202ENST00000261368 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms