RNA–Protein interactions for RNA: ENST00000255465.6

CCNA1-201, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-201ENST00000255465 TAX1BP3O14907 124 aa10.23□□□□□ -0.77
CCNA1-201ENST00000255465 TLX3O43711 291 aaPredicted RBP10.23□□□□□ -0.77
CCNA1-201ENST00000255465 NPIPB7O75200 414 aa10.23□□□□□ -0.77
CCNA1-201ENST00000255465 UPK3AO75631 287 aa10.23□□□□□ -0.77
CCNA1-201ENST00000255465 C1QL1O75973 258 aa10.23□□□□□ -0.77
CCNA1-201ENST00000255465 IGLC1P0CG04 106 aa10.23□□□□□ -0.77
CCNA1-201ENST00000255465 ERGP11308 486 aa10.23□□□□□ -0.77
CCNA1-201ENST00000255465 PVRP15151 417 aa10.23□□□□□ -0.77
CCNA1-201ENST00000255465 RBMXP38159 391 aaKnown RBP10.23□□□□□ -0.77
CCNA1-201ENST00000255465 HINT1P49773 126 aaPredicted RBP10.23□□□□□ -0.77
CCNA1-201ENST00000255465 PPOXP50336 477 aa10.23□□□□□ -0.77
CCNA1-201ENST00000255465 FOXL2P58012 376 aa10.23□□□□□ -0.77
CCNA1-201ENST00000255465 CKS1BP61024 79 aa10.23□□□□□ -0.77
CCNA1-201ENST00000255465 YPEL3P61236 119 aaPredicted RBP10.23□□□□□ -0.77
CCNA1-201ENST00000255465 HSPB3Q12988 150 aa10.23□□□□□ -0.77
CCNA1-201ENST00000255465 C1orf100Q5SVJ3 147 aa10.23□□□□□ -0.77
CCNA1-201ENST00000255465 PRAMEF5Q5TYX0 476 aa10.23□□□□□ -0.77
CCNA1-201ENST00000255465 PRAMEF6Q5VXH4 476 aa10.23□□□□□ -0.77
CCNA1-201ENST00000255465 PLXDC2Q6UX71 529 aa10.23□□□□□ -0.77
CCNA1-201ENST00000255465 NEGR1Q7Z3B1 354 aa10.23□□□□□ -0.77
CCNA1-201ENST00000255465 FAM46BQ96A09 425 aa10.23□□□□□ -0.77
CCNA1-201ENST00000255465 CHODLQ9H9P2 273 aa10.23□□□□□ -0.77
CCNA1-201ENST00000255465 MANBALQ9NQG1 85 aa10.23□□□□□ -0.77
CCNA1-201ENST00000255465 PPIAL4AQ9Y536 164 aa10.23□□□□□ -0.77
CCNA1-201ENST00000255465 TRAPPC1Q9Y5R8 145 aa10.23□□□□□ -0.77
CCNA1-201ENST00000255465 SEC16AO15027 2179 aa10.22□□□□□ -0.77
CCNA1-201ENST00000255465 DUXBA0A1W2PPF3 345 aa10.22□□□□□ -0.77
CCNA1-201ENST00000255465 A0A1W2PPV9 198 aa10.22□□□□□ -0.77
CCNA1-201ENST00000255465 KLRC4-KLRK1H3BQV0 150 aa10.22□□□□□ -0.77
CCNA1-201ENST00000255465 VENTXO95231 258 aa10.22□□□□□ -0.77
CCNA1-201ENST00000255465 TSPAN13O95857 204 aa10.22□□□□□ -0.77
CCNA1-201ENST00000255465 STAG3L2P0CL84 134 aa10.22□□□□□ -0.77
CCNA1-201ENST00000255465 MDKP21741 143 aaPredicted RBP10.22□□□□□ -0.77
CCNA1-201ENST00000255465 CMPK1P30085 196 aa10.22□□□□□ -0.77
CCNA1-201ENST00000255465 CDKN2AP42771 156 aaKnown RBP10.22□□□□□ -0.77
CCNA1-201ENST00000255465 NPBWR2P48146 333 aa10.22□□□□□ -0.77
CCNA1-201ENST00000255465 ARL4DP49703 201 aa10.22□□□□□ -0.77
CCNA1-201ENST00000255465 Q0VG73 95 aa10.22□□□□□ -0.77
CCNA1-201ENST00000255465 PRTGQ2VWP7 1150 aa10.22□□□□□ -0.77
CCNA1-201ENST00000255465 DCAF12Q5T6F0 453 aa10.22□□□□□ -0.77
CCNA1-201ENST00000255465 TMEM164Q5U3C3 297 aa10.22□□□□□ -0.77
CCNA1-201ENST00000255465 CST9LP1Q5W188 147 aa10.22□□□□□ -0.77
CCNA1-201ENST00000255465 SLC16A9Q7RTY1 509 aa10.22□□□□□ -0.77
CCNA1-201ENST00000255465 LHFPL1Q86WI0 220 aa10.22□□□□□ -0.77
CCNA1-201ENST00000255465 ZIC4Q8N9L1 334 aa10.22□□□□□ -0.77
CCNA1-201ENST00000255465 OR4N2Q8NGD1 307 aa10.22□□□□□ -0.77
CCNA1-201ENST00000255465 OR2Y1Q8NGV0 311 aa10.22□□□□□ -0.77
CCNA1-201ENST00000255465 OR2AJ1Q8NGZ0 328 aa10.22□□□□□ -0.77
CCNA1-201ENST00000255465 OR4K13Q8NH42 304 aa10.22□□□□□ -0.77
CCNA1-201ENST00000255465 ZNF480Q8WV37 535 aa10.22□□□□□ -0.77
CCNA1-201ENST00000255465 FER1L6-AS2Q96M78 137 aa10.22□□□□□ -0.77
CCNA1-201ENST00000255465 OR6C1Q96RD1 312 aa10.22□□□□□ -0.77
CCNA1-201ENST00000255465 PRSS27Q9BQR3 290 aa10.22□□□□□ -0.77
CCNA1-201ENST00000255465 NICN1Q9BSH3 213 aa10.22□□□□□ -0.77
CCNA1-201ENST00000255465 REPIN1Q9BWE0 567 aaKnown RBP10.22□□□□□ -0.77
CCNA1-201ENST00000255465 SH3BGRL3Q9H299 93 aa10.22□□□□□ -0.77
CCNA1-201ENST00000255465 MRPL22Q9NWU5 206 aaKnown RBP10.22□□□□□ -0.77
CCNA1-201ENST00000255465 CKLFQ9UBR5 152 aa10.22□□□□□ -0.77
CCNA1-201ENST00000255465 B3GALT1Q9Y5Z6 326 aa10.22□□□□□ -0.77
CCNA1-201ENST00000255465 DMXL2Q8TDJ6 3036 aa10.22□□□□□ -0.77
CCNA1-201ENST00000255465 SAA2-SAA4A0A096LPE2 208 aa10.21□□□□□ -0.77
CCNA1-201ENST00000255465 NSG1A0A0A6YYJ2 146 aa10.21□□□□□ -0.77
CCNA1-201ENST00000255465 A0A0J9YY10 115 aa10.21□□□□□ -0.77
CCNA1-201ENST00000255465 CD5LO43866 347 aa10.21□□□□□ -0.77
CCNA1-201ENST00000255465 CDS2O95674 445 aa10.21□□□□□ -0.77
CCNA1-201ENST00000255465 THY1P04216 161 aa10.21□□□□□ -0.77
CCNA1-201ENST00000255465 SERPINA7P05543 415 aa10.21□□□□□ -0.77
CCNA1-201ENST00000255465 KLK1P06870 262 aa10.21□□□□□ -0.77
CCNA1-201ENST00000255465 TUBG1P23258 451 aa10.21□□□□□ -0.77
CCNA1-201ENST00000255465 SFTPDP35247 375 aa10.21□□□□□ -0.77
CCNA1-201ENST00000255465 SOX2P48431 317 aa10.21□□□□□ -0.77
CCNA1-201ENST00000255465 TAS2R30P59541 319 aa10.21□□□□□ -0.77
CCNA1-201ENST00000255465 FUT5Q11128 374 aa10.21□□□□□ -0.77
CCNA1-201ENST00000255465 AGTRAPQ6RW13 159 aa10.21□□□□□ -0.77
CCNA1-201ENST00000255465 WDR82Q6UXN9 313 aa10.21□□□□□ -0.77
CCNA1-201ENST00000255465 DPY19L4Q7Z388 723 aa10.21□□□□□ -0.77
CCNA1-201ENST00000255465 TMEM256Q8N2U0 113 aa10.21□□□□□ -0.77
CCNA1-201ENST00000255465 Q8N976 141 aa10.21□□□□□ -0.77
CCNA1-201ENST00000255465 SLC16A11Q8NCK7 471 aa10.21□□□□□ -0.77
CCNA1-201ENST00000255465 RTBDNQ9BSG5 229 aaPredicted RBP10.21□□□□□ -0.77
CCNA1-201ENST00000255465 ATG10Q9H0Y0 220 aa10.21□□□□□ -0.77
CCNA1-201ENST00000255465 PLEKHJ1Q9NW61 149 aa10.21□□□□□ -0.77
CCNA1-201ENST00000255465 FRRS1LQ9P0K9 344 aa10.21□□□□□ -0.77
CCNA1-201ENST00000255465 COPS7AQ9UBW8 275 aa10.21□□□□□ -0.77
CCNA1-201ENST00000255465 FBLN5Q9UBX5 448 aa10.21□□□□□ -0.77
CCNA1-201ENST00000255465 MED31Q9Y3C7 131 aa10.21□□□□□ -0.77
CCNA1-201ENST00000255465 GNG7O60262 68 aa10.21□□□□□ -0.78
CCNA1-201ENST00000255465 KBTBD11O94819 623 aa10.21□□□□□ -0.78
CCNA1-201ENST00000255465 NID1P14543 1247 aa10.21□□□□□ -0.78
CCNA1-201ENST00000255465 KITLGP21583 273 aa10.21□□□□□ -0.78
CCNA1-201ENST00000255465 AADACP22760 399 aa10.21□□□□□ -0.78
CCNA1-201ENST00000255465 CTSSP25774 331 aa10.21□□□□□ -0.78
CCNA1-201ENST00000255465 TBPL1P62380 186 aa10.21□□□□□ -0.78
CCNA1-201ENST00000255465 IL11RAQ14626 422 aa10.21□□□□□ -0.78
CCNA1-201ENST00000255465 EXOSC7Q15024 291 aaKnown RBP10.21□□□□□ -0.78
CCNA1-201ENST00000255465 ZIC1Q15915 447 aa10.21□□□□□ -0.78
CCNA1-201ENST00000255465 WDR25Q64LD2 544 aaPredicted RBP10.21□□□□□ -0.78
CCNA1-201ENST00000255465 C12orf54Q6X4T0 127 aa10.21□□□□□ -0.78
CCNA1-201ENST00000255465 ZNF676Q8N7Q3 588 aa10.21□□□□□ -0.78
CCNA1-201ENST00000255465 OR2A1Q8NGT9 310 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms