RNA–Protein interactions for RNA: ENST00000248594.10

PTPN12-201, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN12, Length 3,406 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-201ENST00000248594 ZNHIT1O43257 154 aa15.8■□□□□ 0.12
PTPN12-201ENST00000248594 PSMB3P49720 205 aa15.8■□□□□ 0.12
PTPN12-201ENST00000248594 MEF2BQ02080 365 aaPredicted RBP15.8■□□□□ 0.12
PTPN12-201ENST00000248594 Q5PR19 223 aa15.8■□□□□ 0.12
PTPN12-201ENST00000248594 RASL10BQ96S79 203 aa15.8■□□□□ 0.12
PTPN12-201ENST00000248594 TRDCB7Z8K6 153 aa15.79■□□□□ 0.12
PTPN12-201ENST00000248594 SH2D1BO14796 132 aa15.79■□□□□ 0.12
PTPN12-201ENST00000248594 PAGE4O60829 102 aa15.79■□□□□ 0.12
PTPN12-201ENST00000248594 PPP1CBP62140 327 aa15.79■□□□□ 0.12
PTPN12-201ENST00000248594 KIAA1644Q3SXP7 199 aa15.79■□□□□ 0.12
PTPN12-201ENST00000248594 C9orf50Q5SZB4 431 aa15.79■□□□□ 0.12
PTPN12-201ENST00000248594 YAF2Q8IY57 180 aa15.79■□□□□ 0.12
PTPN12-201ENST00000248594 OR5AU1Q8NGC0 362 aa15.79■□□□□ 0.12
PTPN12-201ENST00000248594 SGMS2Q8NHU3 365 aa15.79■□□□□ 0.12
PTPN12-201ENST00000248594 PLA2G2FQ9BZM2 168 aa15.79■□□□□ 0.12
PTPN12-201ENST00000248594 DIRC3C9JPN6 131 aa15.79■□□□□ 0.12
PTPN12-201ENST00000248594 NPIPA2E9PIF3 369 aa15.79■□□□□ 0.12
PTPN12-201ENST00000248594 ZNF17P17021 662 aa15.79■□□□□ 0.12
PTPN12-201ENST00000248594 OTX2P32243 289 aa15.79■□□□□ 0.12
PTPN12-201ENST00000248594 MDH2P40926 338 aaKnown RBP15.79■□□□□ 0.12
PTPN12-201ENST00000248594 EXT1Q16394 746 aa15.79■□□□□ 0.12
PTPN12-201ENST00000248594 SAXO1Q8IYX7 474 aa15.79■□□□□ 0.12
PTPN12-201ENST00000248594 PSMF1Q92530 271 aa15.79■□□□□ 0.12
PTPN12-201ENST00000248594 LHFPL6Q9Y693 200 aa15.79■□□□□ 0.12
PTPN12-201ENST00000248594 GDF9O60383 454 aa15.78■□□□□ 0.12
PTPN12-201ENST00000248594 NDUFB8O95169 186 aa15.78■□□□□ 0.12
PTPN12-201ENST00000248594 UBALD1Q8TB05 177 aa15.78■□□□□ 0.12
PTPN12-201ENST00000248594 ZNF596Q8TC21 504 aa15.78■□□□□ 0.12
PTPN12-201ENST00000248594 DNASE2BQ8WZ79 361 aa15.78■□□□□ 0.12
PTPN12-201ENST00000248594 ELSPBP1Q96BH3 223 aa15.78■□□□□ 0.12
PTPN12-201ENST00000248594 A0A1W2PNR3 127 aa15.78■□□□□ 0.12
PTPN12-201ENST00000248594 NKX6-3A6NJ46 265 aa15.78■□□□□ 0.12
PTPN12-201ENST00000248594 DXOO77932 396 aaKnown RBP15.78■□□□□ 0.12
PTPN12-201ENST00000248594 ECI1P42126 302 aa15.78■□□□□ 0.12
PTPN12-201ENST00000248594 DUSP3P51452 185 aaPredicted RBP15.78■□□□□ 0.12
PTPN12-201ENST00000248594 MRGPRGQ86SM5 289 aa15.78■□□□□ 0.12
PTPN12-201ENST00000248594 OR10V1Q8NGI7 309 aa15.78■□□□□ 0.12
PTPN12-201ENST00000248594 KIAA1324LA8MWY0 1029 aaPredicted RBP15.78■□□□□ 0.12
PTPN12-201ENST00000248594 MS4A18H0YCH9 400 aa15.78■□□□□ 0.12
PTPN12-201ENST00000248594 MT-ATP6P00846 226 aa15.78■□□□□ 0.12
PTPN12-201ENST00000248594 GUCA1AP43080 201 aaPredicted RBP15.78■□□□□ 0.12
PTPN12-201ENST00000248594 MS4A18Q3C1V0 323 aa15.78■□□□□ 0.12
PTPN12-201ENST00000248594 COA6Q5JTJ3 125 aaKnown RBP15.78■□□□□ 0.12
PTPN12-201ENST00000248594 GAPTQ8N292 157 aa15.78■□□□□ 0.12
PTPN12-201ENST00000248594 ASB10Q8WXI3 467 aa15.78■□□□□ 0.12
PTPN12-201ENST00000248594 SLC7A10Q9NS82 523 aa15.78■□□□□ 0.12
PTPN12-201ENST00000248594 ANAPC10Q9UM13 185 aa15.78■□□□□ 0.12
PTPN12-201ENST00000248594 SLC17A4Q9Y2C5 497 aa15.78■□□□□ 0.12
PTPN12-201ENST00000248594 MUC3AQ02505 3323 aa15.78■□□□□ 0.12
PTPN12-201ENST00000248594 B4DGG1 531 aa15.77■□□□□ 0.12
PTPN12-201ENST00000248594 C1QTNF9P0C862 333 aa15.77■□□□□ 0.12
PTPN12-201ENST00000248594 CRISP2P16562 243 aa15.77■□□□□ 0.12
PTPN12-201ENST00000248594 DTYMKP23919 212 aa15.77■□□□□ 0.12
PTPN12-201ENST00000248594 SLC35B1P78383 322 aa15.77■□□□□ 0.12
PTPN12-201ENST00000248594 CYP2G1PQ6ZSU1 146 aa15.77■□□□□ 0.12
PTPN12-201ENST00000248594 SIGLECL1Q8N7X8 197 aa15.77■□□□□ 0.12
PTPN12-201ENST00000248594 ZDHHC19Q8WVZ1 309 aaPredicted RBP15.77■□□□□ 0.12
PTPN12-201ENST00000248594 LAMTOR2Q9Y2Q5 125 aa15.77■□□□□ 0.12
PTPN12-201ENST00000248594 NCOA6Q14686 2063 aaPredicted RBP15.77■□□□□ 0.11
PTPN12-201ENST00000248594 KBTBD11O94819 623 aa15.77■□□□□ 0.11
PTPN12-201ENST00000248594 DAP3P51398 398 aaKnown RBP15.77■□□□□ 0.11
PTPN12-201ENST00000248594 BLKP51451 505 aa15.77■□□□□ 0.11
PTPN12-201ENST00000248594 RIPPLY3P57055 190 aa15.77■□□□□ 0.11
PTPN12-201ENST00000248594 MSMO1Q15800 293 aa15.77■□□□□ 0.11
PTPN12-201ENST00000248594 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.77■□□□□ 0.11
PTPN12-201ENST00000248594 ETV2O00321 342 aaPredicted RBP15.77■□□□□ 0.11
PTPN12-201ENST00000248594 SEMA4FO95754 770 aa15.77■□□□□ 0.11
PTPN12-201ENST00000248594 PPYP01298 95 aa15.77■□□□□ 0.11
PTPN12-201ENST00000248594 TDGF1P13385 188 aa15.77■□□□□ 0.11
PTPN12-201ENST00000248594 DOK3Q7L591 496 aa15.77■□□□□ 0.11
PTPN12-201ENST00000248594 FLVCR1-AS1Q8TAF5 88 aa15.77■□□□□ 0.11
PTPN12-201ENST00000248594 HDAC8Q9BY41 377 aa15.77■□□□□ 0.11
PTPN12-201ENST00000248594 CXorf51AA0A1B0GTR3 108 aa15.76■□□□□ 0.11
PTPN12-201ENST00000248594 KLF3P57682 345 aaPredicted RBP15.76■□□□□ 0.11
PTPN12-201ENST00000248594 SELENOTP62341 195 aa15.76■□□□□ 0.11
PTPN12-201ENST00000248594 RPS21P63220 83 aaKnown RBP15.76■□□□□ 0.11
PTPN12-201ENST00000248594 OR2V1Q8NHB1 315 aa15.76■□□□□ 0.11
PTPN12-201ENST00000248594 FAM122AQ96E09 287 aa15.76■□□□□ 0.11
PTPN12-201ENST00000248594 MPLP40238 635 aa15.76■□□□□ 0.11
PTPN12-201ENST00000248594 TPTE2P1Q5T6R2 138 aa15.76■□□□□ 0.11
PTPN12-201ENST00000248594 H1FNTQ75WM6 255 aaPredicted RBP15.76■□□□□ 0.11
PTPN12-201ENST00000248594 SMIM15Q7Z3B0 74 aa15.76■□□□□ 0.11
PTPN12-201ENST00000248594 CISD2Q8N5K1 135 aaKnown RBP15.76■□□□□ 0.11
PTPN12-201ENST00000248594 IGHV3-20A0A0C4DH32 117 aa15.75■□□□□ 0.11
PTPN12-201ENST00000248594 A0A0J9YY10 115 aa15.75■□□□□ 0.11
PTPN12-201ENST00000248594 ITGB1BP1O14713 200 aa15.75■□□□□ 0.11
PTPN12-201ENST00000248594 HNRNPA2B1P22626 353 aaKnown RBP15.75■□□□□ 0.11
PTPN12-201ENST00000248594 AMTP48728 403 aa15.75■□□□□ 0.11
PTPN12-201ENST00000248594 DTX1Q86Y01 620 aa15.75■□□□□ 0.11
PTPN12-201ENST00000248594 SPPL3Q8TCT6 385 aa15.75■□□□□ 0.11
PTPN12-201ENST00000248594 ST6GALNAC6Q969X2 333 aa15.75■□□□□ 0.11
PTPN12-201ENST00000248594 CCL28Q9NRJ3 127 aa15.75■□□□□ 0.11
PTPN12-201ENST00000248594 TGIF2LYQ8IUE0 185 aa15.75■□□□□ 0.11
PTPN12-201ENST00000248594 ZDHHC23Q8IYP9 409 aa15.75■□□□□ 0.11
PTPN12-201ENST00000248594 DERL1Q9BUN8 251 aa15.75■□□□□ 0.11
PTPN12-201ENST00000248594 WIPI2Q9Y4P8 454 aa15.75■□□□□ 0.11
PTPN12-201ENST00000248594 COL6A3P12111 3177 aa15.75■□□□□ 0.11
PTPN12-201ENST00000248594 DUXBA0A1W2PPF3 345 aa15.75■□□□□ 0.11
PTPN12-201ENST00000248594 FNDC7Q5VTL7 733 aa15.75■□□□□ 0.11
PTPN12-201ENST00000248594 ZNF738Q8NE65 137 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms